RNA–Protein interactions for RNA: ENST00000296046.3

CPA3-201, Transcript of carboxypeptidase A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA3, Length 1,795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3-201ENST00000296046 NEUROD1Q13562 356 aa8.57□□□□□ -1.04
CPA3-201ENST00000296046 AAMPQ13685 434 aa8.57□□□□□ -1.04
CPA3-201ENST00000296046 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
CPA3-201ENST00000296046 SHROOM4Q9ULL8 1493 aa8.56□□□□□ -1.04
CPA3-201ENST00000296046 ST18O60284 1047 aa8.56□□□□□ -1.04
CPA3-201ENST00000296046 HSP90B1P14625 803 aaKnown RBP8.56□□□□□ -1.04
CPA3-201ENST00000296046 TMEM132AQ24JP5 1023 aa8.56□□□□□ -1.04
CPA3-201ENST00000296046 CREBZFQ9NS37 354 aa8.56□□□□□ -1.04
CPA3-201ENST00000296046 MYO15BQ96JP2 1530 aa8.56□□□□□ -1.04
CPA3-201ENST00000296046 RSPH4AQ5TD94 716 aa8.56□□□□□ -1.04
CPA3-201ENST00000296046 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
CPA3-201ENST00000296046 NBR1Q14596 966 aa8.53□□□□□ -1.04
CPA3-201ENST00000296046 STK25O00506 426 aa8.51□□□□□ -1.05
CPA3-201ENST00000296046 ATMINO43313 823 aaPredicted RBP8.51□□□□□ -1.05
CPA3-201ENST00000296046 RASEFQ8IZ41 740 aa8.51□□□□□ -1.05
CPA3-201ENST00000296046 ABCC9O60706 1549 aa8.51□□□□□ -1.05
CPA3-201ENST00000296046 CCDC136Q96JN2 1154 aa8.5□□□□□ -1.05
CPA3-201ENST00000296046 CCDC180Q9P1Z9 1646 aa8.5□□□□□ -1.05
CPA3-201ENST00000296046 FAM212AQ96EL1 285 aa8.49□□□□□ -1.05
CPA3-201ENST00000296046 BCCIPQ9P287 314 aaKnown RBP eCLIP8.49□□□□□ -1.05
CPA3-201ENST00000296046 A0A0U1RQG5 324 aaPredicted RBP8.48□□□□□ -1.05
CPA3-201ENST00000296046 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
CPA3-201ENST00000296046 HMGB1P09429 215 aaKnown RBP8.48□□□□□ -1.05
CPA3-201ENST00000296046 CHRM1P11229 460 aaPredicted RBP8.48□□□□□ -1.05
CPA3-201ENST00000296046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.46□□□□□ -1.05
CPA3-201ENST00000296046 RBM10P98175 930 aaKnown RBP8.46□□□□□ -1.05
CPA3-201ENST00000296046 ZFP91Q96JP5 570 aaPredicted RBP8.46□□□□□ -1.05
CPA3-201ENST00000296046 NAP1L5Q96NT1 182 aaPredicted RBP8.45□□□□□ -1.06
CPA3-201ENST00000296046 PHF12Q96QT6 1004 aa8.45□□□□□ -1.06
CPA3-201ENST00000296046 SGIP1Q9BQI5 828 aa8.45□□□□□ -1.06
CPA3-201ENST00000296046 PYGBP11216 843 aa8.44□□□□□ -1.06
CPA3-201ENST00000296046 STK24Q9Y6E0 443 aa8.43□□□□□ -1.06
CPA3-201ENST00000296046 TMEM121BQ9BXQ6 578 aaPredicted RBP8.41□□□□□ -1.06
CPA3-201ENST00000296046 DEKP35659 375 aaKnown RBP8.4□□□□□ -1.06
CPA3-201ENST00000296046 ZMYND15Q9H091 742 aa8.4□□□□□ -1.07
CPA3-201ENST00000296046 PAK3O75914 559 aaPredicted RBP8.39□□□□□ -1.07
CPA3-201ENST00000296046 POTEFA5A3E0 1075 aa8.38□□□□□ -1.07
CPA3-201ENST00000296046 UBTFP17480 764 aaKnown RBP8.35□□□□□ -1.07
CPA3-201ENST00000296046 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
CPA3-201ENST00000296046 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
CPA3-201ENST00000296046 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
CPA3-201ENST00000296046 RYDENQ9NUL5 291 aaKnown RBP8.32□□□□□ -1.08
CPA3-201ENST00000296046 CCDC9Q9Y3X0 531 aaKnown RBP8.32□□□□□ -1.08
CPA3-201ENST00000296046 ATN1P54259 1190 aaPredicted RBP8.3□□□□□ -1.08
CPA3-201ENST00000296046 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
CPA3-201ENST00000296046 KCNV2Q8TDN2 545 aa8.3□□□□□ -1.08
CPA3-201ENST00000296046 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
CPA3-201ENST00000296046 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
CPA3-201ENST00000296046 TSPYL2Q9H2G4 693 aaPredicted RBP8.29□□□□□ -1.08
CPA3-201ENST00000296046 IGSF3O75054 1194 aa8.28□□□□□ -1.08
CPA3-201ENST00000296046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
CPA3-201ENST00000296046 NAP1L2Q9ULW6 460 aaPredicted RBP8.27□□□□□ -1.09
CPA3-201ENST00000296046 PCDHB8Q9UN66 801 aa8.27□□□□□ -1.09
CPA3-201ENST00000296046 PCDHB13Q9Y5F0 798 aa8.27□□□□□ -1.09
CPA3-201ENST00000296046 PUS7Q96PZ0 661 aaKnown RBP8.26□□□□□ -1.09
CPA3-201ENST00000296046 P3H3Q8IVL6 736 aa8.25□□□□□ -1.09
CPA3-201ENST00000296046 MFRPQ9BY79 579 aa8.25□□□□□ -1.09
CPA3-201ENST00000296046 ZNF467Q7Z7K2 595 aaPredicted RBP8.25□□□□□ -1.09
CPA3-201ENST00000296046 TICAM2Q86XR7 235 aa8.25□□□□□ -1.09
CPA3-201ENST00000296046 IPO4Q8TEX9 1081 aaKnown RBP8.25□□□□□ -1.09
CPA3-201ENST00000296046 PDAP1Q13442 181 aaKnown RBP8.24□□□□□ -1.09
CPA3-201ENST00000296046 MARVELD3Q96A59 401 aa8.24□□□□□ -1.09
CPA3-201ENST00000296046 NCLP19338 710 aaKnown RBP8.23□□□□□ -1.09
CPA3-201ENST00000296046 TEX2Q8IWB9 1127 aa8.23□□□□□ -1.09
CPA3-201ENST00000296046 IRX6P78412 446 aaPredicted RBP8.22□□□□□ -1.09
CPA3-201ENST00000296046 ARID3AQ99856 593 aa8.22□□□□□ -1.09
CPA3-201ENST00000296046 CCDC61Q9Y6R9 512 aa8.22□□□□□ -1.09
CPA3-201ENST00000296046 PPP1R37O75864 691 aa8.21□□□□□ -1.1
CPA3-201ENST00000296046 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.21□□□□□ -1.1
CPA3-201ENST00000296046 LMOD2Q6P5Q4 547 aa8.2□□□□□ -1.1
CPA3-201ENST00000296046 RNF166Q96A37 237 aaPredicted RBP8.2□□□□□ -1.1
CPA3-201ENST00000296046 WDR70Q9NW82 654 aa8.2□□□□□ -1.1
CPA3-201ENST00000296046 CLSTN1O94985 981 aa8.2□□□□□ -1.1
CPA3-201ENST00000296046 PSEN1P49768 467 aa8.2□□□□□ -1.1
CPA3-201ENST00000296046 YTHDC1Q96MU7 727 aaKnown RBP8.2□□□□□ -1.1
CPA3-201ENST00000296046 SNPHO15079 494 aa8.17□□□□□ -1.1
CPA3-201ENST00000296046 FBXO22Q8NEZ5 403 aa8.17□□□□□ -1.1
CPA3-201ENST00000296046 SEC24BO95487 1268 aa8.16□□□□□ -1.1
CPA3-201ENST00000296046 COLQQ9Y215 455 aaPredicted RBP8.16□□□□□ -1.1
CPA3-201ENST00000296046 IFNL1Q8IU54 200 aa8.15□□□□□ -1.1
CPA3-201ENST00000296046 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.11
CPA3-201ENST00000296046 FTSJ3Q8IY81 847 aaKnown RBP8.14□□□□□ -1.11
CPA3-201ENST00000296046 ZNF592Q92610 1267 aa8.12□□□□□ -1.11
CPA3-201ENST00000296046 BRPF3Q9ULD4 1205 aa8.12□□□□□ -1.11
CPA3-201ENST00000296046 PHF8Q9UPP1 1060 aa8.12□□□□□ -1.11
CPA3-201ENST00000296046 CNPY4Q8N129 248 aa8.12□□□□□ -1.11
CPA3-201ENST00000296046 ARHGEF1Q92888 912 aaKnown RBP8.12□□□□□ -1.11
CPA3-201ENST00000296046 SEMA3EO15041 775 aa8.11□□□□□ -1.11
CPA3-201ENST00000296046 MAP3K13O43283 966 aa8.11□□□□□ -1.11
CPA3-201ENST00000296046 EMP3P54852 163 aa8.11□□□□□ -1.11
CPA3-201ENST00000296046 SECISBP2LQ93073 1101 aaKnown RBP8.11□□□□□ -1.11
CPA3-201ENST00000296046 BRPF1P55201 1214 aaPredicted RBP8.1□□□□□ -1.11
CPA3-201ENST00000296046 ZC3H15Q8WU90 426 aaKnown RBP8.1□□□□□ -1.11
CPA3-201ENST00000296046 HS3ST6Q96QI5 342 aa8.1□□□□□ -1.11
CPA3-201ENST00000296046 PSMD1Q99460 953 aa8.1□□□□□ -1.11
CPA3-201ENST00000296046 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
CPA3-201ENST00000296046 CABP2Q9NPB3 220 aa8.1□□□□□ -1.11
CPA3-201ENST00000296046 BMP2KQ9NSY1 1161 aaPredicted RBP8.1□□□□□ -1.11
CPA3-201ENST00000296046 E2F4Q16254 413 aa8.1□□□□□ -1.11
CPA3-201ENST00000296046 KIF12Q96FN5 646 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms