RNA–Protein interactions for RNA: ENST00000296046.3

CPA3-201, Transcript of carboxypeptidase A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA3, Length 1,795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA3-201ENST00000296046 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
CPA3-201ENST00000296046 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
CPA3-201ENST00000296046 POTEDQ86YR6 584 aa16.33■□□□□ 0.21
CPA3-201ENST00000296046 SENP3Q9H4L4 574 aaPredicted RBP15.69■□□□□ 0.1
CPA3-201ENST00000296046 PHF23Q9BUL5 403 aaPredicted RBP15.24■□□□□ 0.03
CPA3-201ENST00000296046 FOXD1Q16676 465 aa14.74□□□□□ -0.05
CPA3-201ENST00000296046 MSH5O43196 834 aa14.39□□□□□ -0.11
CPA3-201ENST00000296046 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
CPA3-201ENST00000296046 CACNB1Q02641 598 aaPredicted RBP13.15□□□□□ -0.3
CPA3-201ENST00000296046 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
CPA3-201ENST00000296046 PLPPR3Q6T4P5 718 aa12.68□□□□□ -0.38
CPA3-201ENST00000296046 ADRA2BP18089 450 aa12.57□□□□□ -0.4
CPA3-201ENST00000296046 POTEHQ6S545 545 aa12.53□□□□□ -0.4
CPA3-201ENST00000296046 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
CPA3-201ENST00000296046 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
CPA3-201ENST00000296046 MAPK8IP2Q13387 824 aaPredicted RBP11.95□□□□□ -0.5
CPA3-201ENST00000296046 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
CPA3-201ENST00000296046 DCAF8L1A6NGE4 600 aa11.74□□□□□ -0.53
CPA3-201ENST00000296046 KCNA4P22459 653 aa11.69□□□□□ -0.54
CPA3-201ENST00000296046 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
CPA3-201ENST00000296046 EHMT2Q96KQ7 1210 aa11.52□□□□□ -0.57
CPA3-201ENST00000296046 PPP4R3CPQ6ZMV5 832 aa11.28□□□□□ -0.6
CPA3-201ENST00000296046 HOXD11P31277 338 aaPredicted RBP11.23□□□□□ -0.61
CPA3-201ENST00000296046 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
CPA3-201ENST00000296046 DNAJC5BQ9UF47 199 aa11.18□□□□□ -0.62
CPA3-201ENST00000296046 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
CPA3-201ENST00000296046 SP7Q8TDD2 431 aaPredicted RBP11.12□□□□□ -0.63
CPA3-201ENST00000296046 MYT1Q01538 1121 aa11.09□□□□□ -0.63
CPA3-201ENST00000296046 NCBP3Q53F19 620 aaKnown RBP11.03□□□□□ -0.64
CPA3-201ENST00000296046 NPM3O75607 178 aaKnown RBP11.02□□□□□ -0.65
CPA3-201ENST00000296046 PELP1Q8IZL8 1130 aaKnown RBP11.01□□□□□ -0.65
CPA3-201ENST00000296046 SLC24A1O60721 1099 aa10.98□□□□□ -0.65
CPA3-201ENST00000296046 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
CPA3-201ENST00000296046 DSG3P32926 999 aa10.88□□□□□ -0.67
CPA3-201ENST00000296046 TTBK1Q5TCY1 1321 aaPredicted RBP10.86□□□□□ -0.67
CPA3-201ENST00000296046 ZBTB22O15209 634 aa10.83□□□□□ -0.68
CPA3-201ENST00000296046 CNKSR2Q8WXI2 1034 aa10.81□□□□□ -0.68
CPA3-201ENST00000296046 RNF216Q9NWF9 866 aaPredicted RBP10.78□□□□□ -0.68
CPA3-201ENST00000296046 CHRDL2Q6WN34 429 aa10.73□□□□□ -0.69
CPA3-201ENST00000296046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.68□□□□□ -0.7
CPA3-201ENST00000296046 CAPN15O75808 1086 aa10.6□□□□□ -0.71
CPA3-201ENST00000296046 SPINK5Q9NQ38 1064 aaPredicted RBP10.52□□□□□ -0.72
CPA3-201ENST00000296046 FOXD4L1Q9NU39 408 aa10.52□□□□□ -0.72
CPA3-201ENST00000296046 RBM42Q9BTD8 480 aaKnown RBP10.47□□□□□ -0.73
CPA3-201ENST00000296046 ERICH6Q7L0X2 663 aa10.41□□□□□ -0.74
CPA3-201ENST00000296046 LHX8Q68G74 356 aa10.4□□□□□ -0.74
CPA3-201ENST00000296046 HAX1O00165 279 aa10.36□□□□□ -0.75
CPA3-201ENST00000296046 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
CPA3-201ENST00000296046 APLP2Q06481 763 aa10.34□□□□□ -0.75
CPA3-201ENST00000296046 DAXXQ9UER7 740 aaPredicted RBP10.32□□□□□ -0.76
CPA3-201ENST00000296046 SLC4A2P04920 1241 aa10.31□□□□□ -0.76
CPA3-201ENST00000296046 U3KPZ7 1027 aaPredicted RBP10.29□□□□□ -0.76
CPA3-201ENST00000296046 ABCB7O75027 752 aa10.21□□□□□ -0.77
CPA3-201ENST00000296046 PIP4P2Q8N4L2 257 aa10.18□□□□□ -0.78
CPA3-201ENST00000296046 RTN4Q9NQC3 1192 aaKnown RBP10.13□□□□□ -0.79
CPA3-201ENST00000296046 NISCHQ9Y2I1 1504 aa10.1□□□□□ -0.79
CPA3-201ENST00000296046 MYCNP04198 464 aaPredicted RBP10.09□□□□□ -0.79
CPA3-201ENST00000296046 TRHP20396 242 aaPredicted RBP10.09□□□□□ -0.79
CPA3-201ENST00000296046 EVX2Q03828 476 aa10.09□□□□□ -0.79
CPA3-201ENST00000296046 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
CPA3-201ENST00000296046 ZNF219Q9P2Y4 722 aaPredicted RBP10.07□□□□□ -0.8
CPA3-201ENST00000296046 FKBP8Q14318 412 aa10.01□□□□□ -0.81
CPA3-201ENST00000296046 AMER1Q5JTC6 1135 aaPredicted RBP10.01□□□□□ -0.81
CPA3-201ENST00000296046 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
CPA3-201ENST00000296046 AKT1S1Q96B36 256 aa9.92□□□□□ -0.82
CPA3-201ENST00000296046 FXR2P51116 673 aaKnown RBP eCLIP9.91□□□□□ -0.82
CPA3-201ENST00000296046 POTEMA6NI47 508 aa9.86□□□□□ -0.83
CPA3-201ENST00000296046 PCDH10Q9P2E7 1040 aa9.85□□□□□ -0.83
CPA3-201ENST00000296046 GABBR2O75899 941 aa9.83□□□□□ -0.84
CPA3-201ENST00000296046 REM2Q8IYK8 340 aaPredicted RBP9.79□□□□□ -0.84
CPA3-201ENST00000296046 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
CPA3-201ENST00000296046 BCL11AQ9H165 835 aa9.74□□□□□ -0.85
CPA3-201ENST00000296046 EIF5BO60841 1220 aaKnown RBP9.73□□□□□ -0.85
CPA3-201ENST00000296046 PITPNM1O00562 1244 aa9.7□□□□□ -0.86
CPA3-201ENST00000296046 SAMD1Q6SPF0 538 aaPredicted RBP9.7□□□□□ -0.86
CPA3-201ENST00000296046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.67□□□□□ -0.86
CPA3-201ENST00000296046 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
CPA3-201ENST00000296046 C19orf67A6NJJ6 358 aa9.65□□□□□ -0.86
CPA3-201ENST00000296046 POTEIP0CG38 1075 aa9.59□□□□□ -0.87
CPA3-201ENST00000296046 ARXQ96QS3 562 aa9.56□□□□□ -0.88
CPA3-201ENST00000296046 RANGAP1P46060 587 aaPredicted RBP9.52□□□□□ -0.88
CPA3-201ENST00000296046 FAM9AQ8IZU1 332 aaPredicted RBP9.52□□□□□ -0.89
CPA3-201ENST00000296046 OTUD5Q96G74 571 aa9.5□□□□□ -0.89
CPA3-201ENST00000296046 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
CPA3-201ENST00000296046 POLA2Q14181 598 aa9.5□□□□□ -0.89
CPA3-201ENST00000296046 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
CPA3-201ENST00000296046 PRKAR2AP13861 404 aaKnown RBP9.44□□□□□ -0.9
CPA3-201ENST00000296046 PROM2Q8N271 834 aa9.42□□□□□ -0.9
CPA3-201ENST00000296046 FBXO3Q9UK99 471 aa9.4□□□□□ -0.91
CPA3-201ENST00000296046 VASPP50552 380 aaPredicted RBP9.34□□□□□ -0.91
CPA3-201ENST00000296046 IFNLR1Q8IU57 520 aaPredicted RBP9.32□□□□□ -0.92
CPA3-201ENST00000296046 PLEKHG5O94827 1062 aa9.3□□□□□ -0.92
CPA3-201ENST00000296046 CENPBP07199 599 aaPredicted RBP9.29□□□□□ -0.92
CPA3-201ENST00000296046 CLCN6P51797 869 aa9.29□□□□□ -0.92
CPA3-201ENST00000296046 DCBLD2Q96PD2 775 aa9.29□□□□□ -0.92
CPA3-201ENST00000296046 ZBTB12Q9Y330 459 aaPredicted RBP9.29□□□□□ -0.92
CPA3-201ENST00000296046 FBLN2P98095 1184 aa9.27□□□□□ -0.92
CPA3-201ENST00000296046 PLCB2Q00722 1185 aa9.27□□□□□ -0.92
CPA3-201ENST00000296046 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
CPA3-201ENST00000296046 OSCARQ8IYS5 282 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms