RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 CFDP1Q9UEE9 299 aaPredicted RBP35.02■■■■□ 3.2
LINC01116-201ENST00000295549 CDC42BPAQ5VT25 1732 aa35.02■■■■□ 3.2
LINC01116-201ENST00000295549 PPARGC1BQ86YN6 1023 aaKnown RBP35.01■■■■□ 3.2
LINC01116-201ENST00000295549 ARHGAP5Q13017 1502 aa35.01■■■■□ 3.19
LINC01116-201ENST00000295549 CDC42BPBQ9Y5S2 1711 aa34.98■■■■□ 3.19
LINC01116-201ENST00000295549 AKNAQ7Z591 1439 aa34.97■■■■□ 3.19
LINC01116-201ENST00000295549 MYOM3Q5VTT5 1437 aa34.96■■■■□ 3.19
LINC01116-201ENST00000295549 CFAP74Q9C0B2 1584 aa34.96■■■■□ 3.19
LINC01116-201ENST00000295549 ITSN2Q9NZM3 1697 aa34.94■■■■□ 3.18
LINC01116-201ENST00000295549 MIA2Q96PC5 1412 aa34.9■■■■□ 3.18
LINC01116-201ENST00000295549 ZNF777Q9ULD5 760 aaPredicted RBP34.89■■■■□ 3.18
LINC01116-201ENST00000295549 ADGRL1O94910 1474 aa34.87■■■■□ 3.17
LINC01116-201ENST00000295549 COL17A1Q9UMD9 1497 aaPredicted RBP34.86■■■■□ 3.17
LINC01116-201ENST00000295549 SCAPERQ9BY12 1400 aa34.83■■■■□ 3.17
LINC01116-201ENST00000295549 ZNF644Q9H582 1327 aaPredicted RBP34.83■■■■□ 3.17
LINC01116-201ENST00000295549 PLEKHH2Q8IVE3 1493 aa34.82■■■■□ 3.16
LINC01116-201ENST00000295549 SAMD9LQ8IVG5 1584 aa34.82■■■■□ 3.16
LINC01116-201ENST00000295549 FGD6Q6ZV73 1430 aa34.82■■■■□ 3.16
LINC01116-201ENST00000295549 KIAA1107Q9UPP5 1409 aa34.82■■■■□ 3.16
LINC01116-201ENST00000295549 KDM6BO15054 1643 aa34.79■■■■□ 3.16
LINC01116-201ENST00000295549 DENND4BO75064 1496 aaPredicted RBP34.79■■■■□ 3.16
LINC01116-201ENST00000295549 ABCC1P33527 1531 aa34.78■■■■□ 3.16
LINC01116-201ENST00000295549 RAPGEF3O95398 923 aa34.76■■■■□ 3.16
LINC01116-201ENST00000295549 CAMSAP2Q08AD1 1489 aa34.76■■■■□ 3.15
LINC01116-201ENST00000295549 ARHGEF12Q9NZN5 1544 aa34.75■■■■□ 3.15
LINC01116-201ENST00000295549 HNRNPMP52272 730 aaKnown RBP eCLIP34.73■■■■□ 3.15
LINC01116-201ENST00000295549 POGZQ7Z3K3 1410 aa34.73■■■■□ 3.15
LINC01116-201ENST00000295549 TCOF1Q13428 1488 aaKnown RBP34.71■■■■□ 3.15
LINC01116-201ENST00000295549 MBD5Q9P267 1494 aa34.7■■■■□ 3.15
LINC01116-201ENST00000295549 SYCP2Q9BX26 1530 aa34.7■■■■□ 3.15
LINC01116-201ENST00000295549 RSPH4AQ5TD94 716 aa34.69■■■■□ 3.14
LINC01116-201ENST00000295549 TRAPPC8Q9Y2L5 1435 aa34.69■■■■□ 3.14
LINC01116-201ENST00000295549 ZNF518AQ6AHZ1 1483 aa34.69■■■■□ 3.14
LINC01116-201ENST00000295549 PTPN23Q9H3S7 1636 aa34.69■■■■□ 3.14
LINC01116-201ENST00000295549 AFAP1Q8N556 730 aa34.67■■■■□ 3.14
LINC01116-201ENST00000295549 FRMPD1Q5SYB0 1578 aa34.64■■■■□ 3.14
LINC01116-201ENST00000295549 RICTORQ6R327 1708 aa34.64■■■■□ 3.14
LINC01116-201ENST00000295549 RRBP1Q9P2E9 1410 aaKnown RBP34.62■■■■□ 3.13
LINC01116-201ENST00000295549 FAM50AQ14320 339 aaKnown RBP34.6■■■■□ 3.13
LINC01116-201ENST00000295549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.6■■■■□ 3.13
LINC01116-201ENST00000295549 KDM5CP41229 1560 aa34.59■■■■□ 3.13
LINC01116-201ENST00000295549 ARHGEF5Q12774 1597 aa34.59■■■■□ 3.13
LINC01116-201ENST00000295549 CCDC141Q6ZP82 1450 aa34.58■■■■□ 3.13
LINC01116-201ENST00000295549 ZMYM4Q5VZL5 1548 aa34.58■■■■□ 3.13
LINC01116-201ENST00000295549 MAGI2Q86UL8 1455 aa34.56■■■■□ 3.12
LINC01116-201ENST00000295549 MLH3Q9UHC1 1453 aa34.53■■■■□ 3.12
LINC01116-201ENST00000295549 SPAG9O60271 1321 aaKnown RBP34.53■■■■□ 3.12
LINC01116-201ENST00000295549 TSPY4P0CV99 314 aa34.52■■■■□ 3.12
LINC01116-201ENST00000295549 TSPY10P0CW01 314 aa34.52■■■■□ 3.12
LINC01116-201ENST00000295549 ABCC5O15440 1437 aa34.5■■■■□ 3.11
LINC01116-201ENST00000295549 DAPK1P53355 1430 aa34.48■■■■□ 3.11
LINC01116-201ENST00000295549 RTEL1-TNFRSF6BF6WH68 1400 aa34.47■■■■□ 3.11
LINC01116-201ENST00000295549 DNMT1P26358 1616 aaKnown RBP34.46■■■■□ 3.11
LINC01116-201ENST00000295549 HECW2Q9P2P5 1572 aa34.46■■■■□ 3.11
LINC01116-201ENST00000295549 MYT1LQ9UL68 1186 aa34.45■■■■□ 3.11
LINC01116-201ENST00000295549 YEATS2Q9ULM3 1422 aa34.43■■■■□ 3.1
LINC01116-201ENST00000295549 ZFYVE16Q7Z3T8 1539 aa34.43■■■■□ 3.1
LINC01116-201ENST00000295549 SHANK2Q9UPX8 1470 aa34.42■■■■□ 3.1
LINC01116-201ENST00000295549 C9orf84Q5VXU9 1444 aa34.41■■■■□ 3.1
LINC01116-201ENST00000295549 ATP7AQ04656 1500 aa34.4■■■■□ 3.1
LINC01116-201ENST00000295549 INO80Q9ULG1 1556 aaPredicted RBP34.4■■■■□ 3.1
LINC01116-201ENST00000295549 KIDINS220Q9ULH0 1771 aa34.38■■■■□ 3.09
LINC01116-201ENST00000295549 MAST1Q9Y2H9 1570 aa34.38■■■■□ 3.09
LINC01116-201ENST00000295549 ARHGEF40Q8TER5 1519 aa34.38■■■■□ 3.09
LINC01116-201ENST00000295549 PTPRKQ15262 1439 aa34.34■■■■□ 3.09
LINC01116-201ENST00000295549 ATP10AO60312 1499 aa34.34■■■■□ 3.09
LINC01116-201ENST00000295549 CROCC2H7BZ55 1655 aa34.34■■■■□ 3.09
LINC01116-201ENST00000295549 ITGAEP38570 1179 aa34.31■■■■□ 3.08
LINC01116-201ENST00000295549 CHIC2Q9UKJ5 165 aa34.31■■■■□ 3.08
LINC01116-201ENST00000295549 DIP2CQ9Y2E4 1556 aa34.31■■■■□ 3.08
LINC01116-201ENST00000295549 ABCA6Q8N139 1617 aa34.29■■■■□ 3.08
LINC01116-201ENST00000295549 ANKRD30AQ9BXX3 1397 aa34.27■■■■□ 3.08
LINC01116-201ENST00000295549 ADGRL2O95490 1459 aa34.27■■■■□ 3.08
LINC01116-201ENST00000295549 NCOA1Q15788 1441 aa34.26■■■■□ 3.08
LINC01116-201ENST00000295549 ROCK1Q13464 1354 aa34.24■■■■□ 3.07
LINC01116-201ENST00000295549 PLXNC1O60486 1568 aa34.24■■■■□ 3.07
LINC01116-201ENST00000295549 REREQ9P2R6 1566 aa34.23■■■■□ 3.07
LINC01116-201ENST00000295549 A2MP01023 1474 aa34.22■■■■□ 3.07
LINC01116-201ENST00000295549 DHX29Q7Z478 1369 aaKnown RBP34.22■■■■□ 3.07
LINC01116-201ENST00000295549 KIF15Q9NS87 1388 aa34.21■■■■□ 3.07
LINC01116-201ENST00000295549 RRP7BPQ9NSQ0 103 aa34.21■■■■□ 3.07
LINC01116-201ENST00000295549 ADGBQ8N7X0 1667 aa34.19■■■■□ 3.06
LINC01116-201ENST00000295549 DUOX2Q9NRD8 1548 aa34.14■■■■□ 3.06
LINC01116-201ENST00000295549 AGLP35573 1532 aa34.13■■■■□ 3.05
LINC01116-201ENST00000295549 ARID4BQ4LE39 1312 aaPredicted RBP34.13■■■■□ 3.05
LINC01116-201ENST00000295549 SIGLEC1Q9BZZ2 1709 aa34.08■■■■□ 3.05
LINC01116-201ENST00000295549 ERBINQ96RT1 1412 aa34.08■■■■□ 3.05
LINC01116-201ENST00000295549 TRIM26Q12899 539 aaPredicted RBP34.05■■■■□ 3.04
LINC01116-201ENST00000295549 ANKRD50Q9ULJ7 1429 aa34.04■■■■□ 3.04
LINC01116-201ENST00000295549 KIF3BO15066 747 aa34.03■■■■□ 3.04
LINC01116-201ENST00000295549 HFM1A2PYH4 1435 aa34.02■■■■□ 3.04
LINC01116-201ENST00000295549 NAIPQ13075 1403 aa34.01■■■■□ 3.03
LINC01116-201ENST00000295549 EIF2AK4Q9P2K8 1649 aaKnown RBP33.99■■■■□ 3.03
LINC01116-201ENST00000295549 BCORL1Q5H9F3 1711 aa33.97■■■■□ 3.03
LINC01116-201ENST00000295549 MLECQ14165 292 aa33.96■■■■□ 3.03
LINC01116-201ENST00000295549 GGT6Q6P531 493 aa33.94■■■■□ 3.02
LINC01116-201ENST00000295549 PPP6R1Q9UPN7 881 aa33.94■■■■□ 3.02
LINC01116-201ENST00000295549 GCC2Q8IWJ2 1684 aa33.88■■■■□ 3.01
LINC01116-201ENST00000295549 RNF17Q9BXT8 1623 aaKnown RBP33.88■■■■□ 3.01
LINC01116-201ENST00000295549 SETD5Q9C0A6 1442 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms