RNA–Protein interactions for RNA: ENST00000295055.12

CAPN13-201, Transcript of calpain 13, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN13, Length 2,683 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-201ENST00000295055 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
CAPN13-201ENST00000295055 TROQ12816 1431 aaPredicted RBP17.33■□□□□ 0.37
CAPN13-201ENST00000295055 PDE4CQ08493 712 aa17.32■□□□□ 0.36
CAPN13-201ENST00000295055 ZCCHC11Q5TAX3 1644 aaKnown RBP17.32■□□□□ 0.36
CAPN13-201ENST00000295055 NEFLP07196 543 aa17.32■□□□□ 0.36
CAPN13-201ENST00000295055 PDIA4P13667 645 aaKnown RBP17.32■□□□□ 0.36
CAPN13-201ENST00000295055 NCOA2Q15596 1464 aa17.31■□□□□ 0.36
CAPN13-201ENST00000295055 SUPT6HQ7KZ85 1726 aaKnown RBP17.31■□□□□ 0.36
CAPN13-201ENST00000295055 PHLDB1Q86UU1 1377 aa17.31■□□□□ 0.36
CAPN13-201ENST00000295055 MSH5O43196 834 aa17.27■□□□□ 0.36
CAPN13-201ENST00000295055 NPM1P06748 294 aaKnown RBP eCLIP17.26■□□□□ 0.35
CAPN13-201ENST00000295055 RRBP1Q9P2E9 1410 aaKnown RBP17.25■□□□□ 0.35
CAPN13-201ENST00000295055 MYT1LQ9UL68 1186 aa17.25■□□□□ 0.35
CAPN13-201ENST00000295055 KIF14Q15058 1648 aa17.24■□□□□ 0.35
CAPN13-201ENST00000295055 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
CAPN13-201ENST00000295055 CCNB3Q8WWL7 1395 aa17.21■□□□□ 0.35
CAPN13-201ENST00000295055 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.34
CAPN13-201ENST00000295055 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
CAPN13-201ENST00000295055 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
CAPN13-201ENST00000295055 KCNH8Q96L42 1107 aa17.2■□□□□ 0.34
CAPN13-201ENST00000295055 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
CAPN13-201ENST00000295055 FGD1P98174 961 aa17.17■□□□□ 0.34
CAPN13-201ENST00000295055 CLSPNQ9HAW4 1339 aa17.17■□□□□ 0.34
CAPN13-201ENST00000295055 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
CAPN13-201ENST00000295055 DNAJC5Q9H3Z4 198 aa17.17■□□□□ 0.34
CAPN13-201ENST00000295055 RBM19Q9Y4C8 960 aaKnown RBP17.17■□□□□ 0.34
CAPN13-201ENST00000295055 MIA2Q96PC5 1412 aa17.17■□□□□ 0.34
CAPN13-201ENST00000295055 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.16■□□□□ 0.34
CAPN13-201ENST00000295055 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
CAPN13-201ENST00000295055 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
CAPN13-201ENST00000295055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.15■□□□□ 0.34
CAPN13-201ENST00000295055 MAPKBP1O60336 1514 aa17.14■□□□□ 0.33
CAPN13-201ENST00000295055 FAM50AQ14320 339 aaKnown RBP17.14■□□□□ 0.33
CAPN13-201ENST00000295055 IL27Q8NEV9 243 aa17.13■□□□□ 0.33
CAPN13-201ENST00000295055 CFDP1Q9UEE9 299 aaPredicted RBP17.13■□□□□ 0.33
CAPN13-201ENST00000295055 TTC37Q6PGP7 1564 aa17.12■□□□□ 0.33
CAPN13-201ENST00000295055 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
CAPN13-201ENST00000295055 CDC42BPAQ5VT25 1732 aa17.11■□□□□ 0.33
CAPN13-201ENST00000295055 ITSN2Q9NZM3 1697 aa17.11■□□□□ 0.33
CAPN13-201ENST00000295055 PTPN23Q9H3S7 1636 aa17.11■□□□□ 0.33
CAPN13-201ENST00000295055 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
CAPN13-201ENST00000295055 ZMYND15Q9H091 742 aa17.11■□□□□ 0.33
CAPN13-201ENST00000295055 ABCA9Q8IUA7 1624 aa17.08■□□□□ 0.32
CAPN13-201ENST00000295055 PLCH2O75038 1416 aa17.08■□□□□ 0.32
CAPN13-201ENST00000295055 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.32
CAPN13-201ENST00000295055 PREX2Q70Z35 1606 aa17.07■□□□□ 0.32
CAPN13-201ENST00000295055 ARXQ96QS3 562 aa17.06■□□□□ 0.32
CAPN13-201ENST00000295055 CDC42BPBQ9Y5S2 1711 aa17.06■□□□□ 0.32
CAPN13-201ENST00000295055 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
CAPN13-201ENST00000295055 ITGAEP38570 1179 aa17.05■□□□□ 0.32
CAPN13-201ENST00000295055 ZNF777Q9ULD5 760 aaPredicted RBP17.05■□□□□ 0.32
CAPN13-201ENST00000295055 AAMPQ13685 434 aa17.04■□□□□ 0.32
CAPN13-201ENST00000295055 CAMSAP2Q08AD1 1489 aa17.04■□□□□ 0.32
CAPN13-201ENST00000295055 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
CAPN13-201ENST00000295055 ARAP3Q8WWN8 1544 aa17.02■□□□□ 0.32
CAPN13-201ENST00000295055 EFCAB2Q5VUJ9 269 aa17.01■□□□□ 0.31
CAPN13-201ENST00000295055 PTPRKQ15262 1439 aa17■□□□□ 0.31
CAPN13-201ENST00000295055 CD109Q6YHK3 1445 aa17■□□□□ 0.31
CAPN13-201ENST00000295055 GLI2P10070 1586 aa17■□□□□ 0.31
CAPN13-201ENST00000295055 SAMD9LQ8IVG5 1584 aa16.99■□□□□ 0.31
CAPN13-201ENST00000295055 TIMELESSQ9UNS1 1208 aa16.98■□□□□ 0.31
CAPN13-201ENST00000295055 RBM10P98175 930 aaKnown RBP16.98■□□□□ 0.31
CAPN13-201ENST00000295055 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
CAPN13-201ENST00000295055 ABCC5O15440 1437 aa16.97■□□□□ 0.31
CAPN13-201ENST00000295055 FAM69CQ0P6D2 419 aa16.97■□□□□ 0.31
CAPN13-201ENST00000295055 DAPK1P53355 1430 aa16.97■□□□□ 0.31
CAPN13-201ENST00000295055 DNMT1P26358 1616 aaKnown RBP16.96■□□□□ 0.31
CAPN13-201ENST00000295055 KIAA1107Q9UPP5 1409 aa16.96■□□□□ 0.31
CAPN13-201ENST00000295055 HNRNPMP52272 730 aaKnown RBP eCLIP16.96■□□□□ 0.31
CAPN13-201ENST00000295055 FANCAO15360 1455 aa16.96■□□□□ 0.31
CAPN13-201ENST00000295055 MBD5Q9P267 1494 aa16.96■□□□□ 0.31
CAPN13-201ENST00000295055 PLEKHH2Q8IVE3 1493 aa16.95■□□□□ 0.3
CAPN13-201ENST00000295055 MAP3K4Q9Y6R4 1608 aa16.94■□□□□ 0.3
CAPN13-201ENST00000295055 RSPH4AQ5TD94 716 aa16.94■□□□□ 0.3
CAPN13-201ENST00000295055 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
CAPN13-201ENST00000295055 ARHGEF5Q12774 1597 aa16.93■□□□□ 0.3
CAPN13-201ENST00000295055 MIER1Q8N108 512 aa16.92■□□□□ 0.3
CAPN13-201ENST00000295055 SYCP2Q9BX26 1530 aa16.92■□□□□ 0.3
CAPN13-201ENST00000295055 ARHGEF12Q9NZN5 1544 aa16.92■□□□□ 0.3
CAPN13-201ENST00000295055 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
CAPN13-201ENST00000295055 ABCC1P33527 1531 aa16.91■□□□□ 0.3
CAPN13-201ENST00000295055 AKNAQ7Z591 1439 aa16.9■□□□□ 0.3
CAPN13-201ENST00000295055 CCDC141Q6ZP82 1450 aa16.89■□□□□ 0.29
CAPN13-201ENST00000295055 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
CAPN13-201ENST00000295055 TSPY4P0CV99 314 aa16.89■□□□□ 0.29
CAPN13-201ENST00000295055 TSPY10P0CW01 314 aa16.89■□□□□ 0.29
CAPN13-201ENST00000295055 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
CAPN13-201ENST00000295055 KIF13AQ9H1H9 1805 aa16.88■□□□□ 0.29
CAPN13-201ENST00000295055 ADGRL1O94910 1474 aa16.88■□□□□ 0.29
CAPN13-201ENST00000295055 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
CAPN13-201ENST00000295055 HFM1A2PYH4 1435 aa16.88■□□□□ 0.29
CAPN13-201ENST00000295055 SETD5Q9C0A6 1442 aa16.88■□□□□ 0.29
CAPN13-201ENST00000295055 CFAP74Q9C0B2 1584 aa16.87■□□□□ 0.29
CAPN13-201ENST00000295055 GLIPR1L2Q4G1C9 344 aa16.87■□□□□ 0.29
CAPN13-201ENST00000295055 NEO1Q92859 1461 aa16.87■□□□□ 0.29
CAPN13-201ENST00000295055 SCAPERQ9BY12 1400 aa16.86■□□□□ 0.29
CAPN13-201ENST00000295055 TRAPPC8Q9Y2L5 1435 aa16.86■□□□□ 0.29
CAPN13-201ENST00000295055 RRP7BPQ9NSQ0 103 aa16.86■□□□□ 0.29
CAPN13-201ENST00000295055 NAIPQ13075 1403 aa16.85■□□□□ 0.29
CAPN13-201ENST00000295055 C9orf84Q5VXU9 1444 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms