RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 DAPK1P53355 1430 aa23.42■■□□□ 1.34
CHRNE-201ENST00000293780 CCDC184Q52MB2 194 aa23.42■■□□□ 1.34
CHRNE-201ENST00000293780 ANP32EQ9BTT0 268 aa23.41■■□□□ 1.34
CHRNE-201ENST00000293780 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
CHRNE-201ENST00000293780 ABCC5O15440 1437 aa23.4■■□□□ 1.34
CHRNE-201ENST00000293780 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
CHRNE-201ENST00000293780 DISP1Q96F81 1524 aa23.38■■□□□ 1.33
CHRNE-201ENST00000293780 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
CHRNE-201ENST00000293780 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
CHRNE-201ENST00000293780 ROCK1Q13464 1354 aa23.36■■□□□ 1.33
CHRNE-201ENST00000293780 NUP153P49790 1475 aaKnown RBP23.36■■□□□ 1.33
CHRNE-201ENST00000293780 RBM19Q9Y4C8 960 aaKnown RBP23.36■■□□□ 1.33
CHRNE-201ENST00000293780 FBLN2P98095 1184 aa23.35■■□□□ 1.33
CHRNE-201ENST00000293780 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
CHRNE-201ENST00000293780 KIAA0556O60303 1618 aa23.35■■□□□ 1.33
CHRNE-201ENST00000293780 CCDC7Q96M83 1385 aa23.34■■□□□ 1.33
CHRNE-201ENST00000293780 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
CHRNE-201ENST00000293780 RPRD2Q5VT52 1461 aaKnown RBP23.34■■□□□ 1.33
CHRNE-201ENST00000293780 NCOA1Q15788 1441 aa23.34■■□□□ 1.33
CHRNE-201ENST00000293780 KIAA0586Q9BVV6 1533 aa23.34■■□□□ 1.33
CHRNE-201ENST00000293780 DNMT1P26358 1616 aaKnown RBP23.33■■□□□ 1.33
CHRNE-201ENST00000293780 CHMP7Q8WUX9 453 aaPredicted RBP23.32■■□□□ 1.32
CHRNE-201ENST00000293780 PRKRIP1Q9H875 184 aaPredicted RBP23.31■■□□□ 1.32
CHRNE-201ENST00000293780 TEX14Q8IWB6 1497 aa23.3■■□□□ 1.32
CHRNE-201ENST00000293780 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
CHRNE-201ENST00000293780 SYNJ2O15056 1496 aa23.29■■□□□ 1.32
CHRNE-201ENST00000293780 RAPGEF6Q8TEU7 1601 aa23.28■■□□□ 1.32
CHRNE-201ENST00000293780 FAM9BQ8IZU0 186 aa23.28■■□□□ 1.32
CHRNE-201ENST00000293780 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
CHRNE-201ENST00000293780 PRG4Q92954 1404 aaPredicted RBP23.28■■□□□ 1.32
CHRNE-201ENST00000293780 KIF7Q2M1P5 1343 aa23.25■■□□□ 1.31
CHRNE-201ENST00000293780 SPATA31E1Q6ZUB1 1445 aa23.24■■□□□ 1.31
CHRNE-201ENST00000293780 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
CHRNE-201ENST00000293780 CFDP1Q9UEE9 299 aaPredicted RBP23.23■■□□□ 1.31
CHRNE-201ENST00000293780 ZNF777Q9ULD5 760 aaPredicted RBP23.23■■□□□ 1.31
CHRNE-201ENST00000293780 PZPP20742 1482 aa23.21■■□□□ 1.31
CHRNE-201ENST00000293780 CAMSAP2Q08AD1 1489 aa23.2■■□□□ 1.3
CHRNE-201ENST00000293780 TROQ12816 1431 aaPredicted RBP23.19■■□□□ 1.3
CHRNE-201ENST00000293780 PLB1Q6P1J6 1458 aa23.19■■□□□ 1.3
CHRNE-201ENST00000293780 CEP170Q5SW79 1584 aa23.17■■□□□ 1.3
CHRNE-201ENST00000293780 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
CHRNE-201ENST00000293780 CNGB1Q14028 1251 aaPredicted RBP23.15■■□□□ 1.3
CHRNE-201ENST00000293780 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
CHRNE-201ENST00000293780 KIF14Q15058 1648 aa23.14■■□□□ 1.29
CHRNE-201ENST00000293780 PKD2Q13563 968 aa23.13■■□□□ 1.29
CHRNE-201ENST00000293780 ZBED9Q6R2W3 1325 aa23.11■■□□□ 1.29
CHRNE-201ENST00000293780 POLR3GLQ9BT43 218 aa23.11■■□□□ 1.29
CHRNE-201ENST00000293780 NUP160Q12769 1436 aa23.11■■□□□ 1.29
CHRNE-201ENST00000293780 KIAA1107Q9UPP5 1409 aa23.1■■□□□ 1.29
CHRNE-201ENST00000293780 POLR1AO95602 1720 aaPredicted RBP23.09■■□□□ 1.29
CHRNE-201ENST00000293780 ADGBQ8N7X0 1667 aa23.08■■□□□ 1.29
CHRNE-201ENST00000293780 MBD5Q9P267 1494 aa23.08■■□□□ 1.29
CHRNE-201ENST00000293780 ITSN2Q9NZM3 1697 aa23.08■■□□□ 1.28
CHRNE-201ENST00000293780 BCL11AQ9H165 835 aa23.07■■□□□ 1.28
CHRNE-201ENST00000293780 PPP4R2Q9NY27 417 aa23.07■■□□□ 1.28
CHRNE-201ENST00000293780 CHD1O14646 1710 aa23.07■■□□□ 1.28
CHRNE-201ENST00000293780 USP47Q96K76 1375 aa23.06■■□□□ 1.28
CHRNE-201ENST00000293780 ADGRL2O95490 1459 aa23.06■■□□□ 1.28
CHRNE-201ENST00000293780 MSH5O43196 834 aa23.06■■□□□ 1.28
CHRNE-201ENST00000293780 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
CHRNE-201ENST00000293780 DHX29Q7Z478 1369 aaKnown RBP23.05■■□□□ 1.28
CHRNE-201ENST00000293780 ANKRD30AQ9BXX3 1397 aa23.05■■□□□ 1.28
CHRNE-201ENST00000293780 ERICH6BQ5W0A0 696 aa23.05■■□□□ 1.28
CHRNE-201ENST00000293780 BCORL1Q5H9F3 1711 aa23.05■■□□□ 1.28
CHRNE-201ENST00000293780 ADCY10Q96PN6 1610 aa23.03■■□□□ 1.28
CHRNE-201ENST00000293780 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
CHRNE-201ENST00000293780 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
CHRNE-201ENST00000293780 B4GALNT3Q6L9W6 998 aa23.01■■□□□ 1.27
CHRNE-201ENST00000293780 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
CHRNE-201ENST00000293780 PLEKHD1A6NEE1 506 aa22.99■■□□□ 1.27
CHRNE-201ENST00000293780 NUP155O75694 1391 aa22.99■■□□□ 1.27
CHRNE-201ENST00000293780 SENP3-EIF4A1A0A087X0R7 540 aa22.98■■□□□ 1.27
CHRNE-201ENST00000293780 KDM5CP41229 1560 aa22.96■■□□□ 1.27
CHRNE-201ENST00000293780 CDC42BPAQ5VT25 1732 aa22.94■■□□□ 1.26
CHRNE-201ENST00000293780 C9orf84Q5VXU9 1444 aa22.94■■□□□ 1.26
CHRNE-201ENST00000293780 KDM2AQ9Y2K7 1162 aa22.94■■□□□ 1.26
CHRNE-201ENST00000293780 ATP10BO94823 1461 aa22.93■■□□□ 1.26
CHRNE-201ENST00000293780 ABCC10Q5T3U5 1492 aa22.93■■□□□ 1.26
CHRNE-201ENST00000293780 CARD11Q9BXL7 1154 aa22.93■■□□□ 1.26
CHRNE-201ENST00000293780 FANCIQ9NVI1 1328 aa22.93■■□□□ 1.26
CHRNE-201ENST00000293780 HNRNPMP52272 730 aaKnown RBP eCLIP22.92■■□□□ 1.26
CHRNE-201ENST00000293780 TSPY4P0CV99 314 aa22.91■■□□□ 1.26
CHRNE-201ENST00000293780 TSPY10P0CW01 314 aa22.91■■□□□ 1.26
CHRNE-201ENST00000293780 UHRF1BP1Q6BDS2 1440 aa22.91■■□□□ 1.26
CHRNE-201ENST00000293780 ABCA8O94911 1581 aa22.89■■□□□ 1.26
CHRNE-201ENST00000293780 ARID4BQ4LE39 1312 aaPredicted RBP22.89■■□□□ 1.25
CHRNE-201ENST00000293780 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
CHRNE-201ENST00000293780 SMG6Q86US8 1419 aaKnown RBP22.88■■□□□ 1.25
CHRNE-201ENST00000293780 ST20-MTHFSA0A0A6YYL1 179 aa22.88■■□□□ 1.25
CHRNE-201ENST00000293780 DCAF11Q8TEB1 546 aa22.87■■□□□ 1.25
CHRNE-201ENST00000293780 SHANK2Q9UPX8 1470 aa22.87■■□□□ 1.25
CHRNE-201ENST00000293780 PNISRQ8TF01 805 aaKnown RBP22.86■■□□□ 1.25
CHRNE-201ENST00000293780 NUDCQ9Y266 331 aa22.86■■□□□ 1.25
CHRNE-201ENST00000293780 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
CHRNE-201ENST00000293780 TMC1Q8TDI8 760 aa22.84■■□□□ 1.25
CHRNE-201ENST00000293780 ROCK2O75116 1388 aaKnown RBP22.82■■□□□ 1.24
CHRNE-201ENST00000293780 KDM5DQ9BY66 1539 aa22.81■■□□□ 1.24
CHRNE-201ENST00000293780 ARHGEF12Q9NZN5 1544 aa22.81■■□□□ 1.24
CHRNE-201ENST00000293780 PTPRGP23470 1445 aa22.79■■□□□ 1.24
CHRNE-201ENST00000293780 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms