RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 CDK11AQ9UQ88 783 aaPredicted RBP30.54■■■□□ 2.48
PAXBP1-201ENST00000290178 HSPA5P11021 654 aaKnown RBP30.54■■■□□ 2.48
PAXBP1-201ENST00000290178 L3MBTL2Q969R5 705 aa30.53■■■□□ 2.48
PAXBP1-201ENST00000290178 PLB1Q6P1J6 1458 aa30.52■■■□□ 2.48
PAXBP1-201ENST00000290178 CEP170Q5SW79 1584 aa30.5■■■□□ 2.47
PAXBP1-201ENST00000290178 ROCK1Q13464 1354 aa30.48■■■□□ 2.47
PAXBP1-201ENST00000290178 DNMT1P26358 1616 aaKnown RBP30.47■■■□□ 2.47
PAXBP1-201ENST00000290178 MAGI1Q96QZ7 1491 aaPredicted RBP30.47■■■□□ 2.47
PAXBP1-201ENST00000290178 WASHC2AQ641Q2 1341 aa30.46■■■□□ 2.47
PAXBP1-201ENST00000290178 SYNJ2O15056 1496 aa30.45■■■□□ 2.46
PAXBP1-201ENST00000290178 ZNF777Q9ULD5 760 aaPredicted RBP30.45■■■□□ 2.46
PAXBP1-201ENST00000290178 CFDP1Q9UEE9 299 aaPredicted RBP30.44■■■□□ 2.46
PAXBP1-201ENST00000290178 JPH4Q96JJ6 628 aa30.43■■■□□ 2.46
PAXBP1-201ENST00000290178 TROQ12816 1431 aaPredicted RBP30.43■■■□□ 2.46
PAXBP1-201ENST00000290178 SLC4A1APQ9BWU0 796 aaKnown RBP30.43■■■□□ 2.46
PAXBP1-201ENST00000290178 ANKRD30BQ9BXX2 1392 aa30.42■■■□□ 2.46
PAXBP1-201ENST00000290178 EIF4G2P78344 907 aaKnown RBP eCLIP30.41■■■□□ 2.46
PAXBP1-201ENST00000290178 BCANQ96GW7 911 aa30.4■■■□□ 2.46
PAXBP1-201ENST00000290178 NBPF8Q3BBV2 869 aa30.37■■■□□ 2.45
PAXBP1-201ENST00000290178 CAMSAP2Q08AD1 1489 aa30.37■■■□□ 2.45
PAXBP1-201ENST00000290178 FKBP8Q14318 412 aa30.36■■■□□ 2.45
PAXBP1-201ENST00000290178 KIF14Q15058 1648 aa30.36■■■□□ 2.45
PAXBP1-201ENST00000290178 GPATCH8Q9UKJ3 1502 aaKnown RBP30.35■■■□□ 2.45
PAXBP1-201ENST00000290178 C11orf95C9JLR9 678 aaPredicted RBP30.34■■■□□ 2.45
PAXBP1-201ENST00000290178 RPRD2Q5VT52 1461 aaKnown RBP30.33■■■□□ 2.45
PAXBP1-201ENST00000290178 CARMIL2Q6F5E8 1435 aa30.32■■■□□ 2.44
PAXBP1-201ENST00000290178 NUP160Q12769 1436 aa30.3■■■□□ 2.44
PAXBP1-201ENST00000290178 NCOA1Q15788 1441 aa30.29■■■□□ 2.44
PAXBP1-201ENST00000290178 TEX14Q8IWB6 1497 aa30.26■■■□□ 2.43
PAXBP1-201ENST00000290178 PZPP20742 1482 aa30.25■■■□□ 2.43
PAXBP1-201ENST00000290178 ITSN2Q9NZM3 1697 aa30.23■■■□□ 2.43
PAXBP1-201ENST00000290178 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
PAXBP1-201ENST00000290178 ADCY10Q96PN6 1610 aa30.2■■■□□ 2.42
PAXBP1-201ENST00000290178 HNRNPUQ00839 825 aaKnown RBP eCLIP30.18■■■□□ 2.42
PAXBP1-201ENST00000290178 CCDC184Q52MB2 194 aa30.18■■■□□ 2.42
PAXBP1-201ENST00000290178 CCDC7Q96M83 1385 aa30.18■■■□□ 2.42
PAXBP1-201ENST00000290178 TSHZ2Q9NRE2 1034 aa30.17■■■□□ 2.42
PAXBP1-201ENST00000290178 ATP10BO94823 1461 aa30.17■■■□□ 2.42
PAXBP1-201ENST00000290178 CNTLNQ9NXG0 1405 aa30.17■■■□□ 2.42
PAXBP1-201ENST00000290178 PKD2Q13563 968 aa30.16■■■□□ 2.42
PAXBP1-201ENST00000290178 ADGBQ8N7X0 1667 aa30.15■■■□□ 2.42
PAXBP1-201ENST00000290178 ANKRD30AQ9BXX3 1397 aa30.14■■■□□ 2.42
PAXBP1-201ENST00000290178 ABCA8O94911 1581 aa30.13■■■□□ 2.41
PAXBP1-201ENST00000290178 NEFLP07196 543 aa30.13■■■□□ 2.41
PAXBP1-201ENST00000290178 ADGRL2O95490 1459 aa30.13■■■□□ 2.41
PAXBP1-201ENST00000290178 ZNF326Q5BKZ1 582 aaKnown RBP30.11■■■□□ 2.41
PAXBP1-201ENST00000290178 CROCC2H7BZ55 1655 aa30.11■■■□□ 2.41
PAXBP1-201ENST00000290178 SPATA31E1Q6ZUB1 1445 aa30.1■■■□□ 2.41
PAXBP1-201ENST00000290178 ANKRD50Q9ULJ7 1429 aa30.09■■■□□ 2.41
PAXBP1-201ENST00000290178 KIAA1107Q9UPP5 1409 aa30.09■■■□□ 2.41
PAXBP1-201ENST00000290178 KIF7Q2M1P5 1343 aa30.09■■■□□ 2.41
PAXBP1-201ENST00000290178 ABCC10Q5T3U5 1492 aa30.09■■■□□ 2.41
PAXBP1-201ENST00000290178 CDC42BPAQ5VT25 1732 aa30.09■■■□□ 2.41
PAXBP1-201ENST00000290178 PRKRIP1Q9H875 184 aaPredicted RBP30.07■■■□□ 2.4
PAXBP1-201ENST00000290178 HNRNPMP52272 730 aaKnown RBP eCLIP30.06■■■□□ 2.41e-8■■■■□ 20.6
PAXBP1-201ENST00000290178 C9orf84Q5VXU9 1444 aa30.03■■■□□ 2.4
PAXBP1-201ENST00000290178 NUP155O75694 1391 aa30.02■■■□□ 2.4
PAXBP1-201ENST00000290178 TSPY4P0CV99 314 aa30.01■■■□□ 2.39
PAXBP1-201ENST00000290178 TSPY10P0CW01 314 aa30.01■■■□□ 2.39
PAXBP1-201ENST00000290178 PTPRGP23470 1445 aa30■■■□□ 2.39
PAXBP1-201ENST00000290178 FAM9BQ8IZU0 186 aa29.99■■■□□ 2.39
PAXBP1-201ENST00000290178 MBD5Q9P267 1494 aa29.98■■■□□ 2.39
PAXBP1-201ENST00000290178 CNGB1Q14028 1251 aaPredicted RBP29.97■■■□□ 2.39
PAXBP1-201ENST00000290178 POLR3GLQ9BT43 218 aa29.97■■■□□ 2.39
PAXBP1-201ENST00000290178 MRS2Q9HD23 443 aa29.96■■■□□ 2.39
PAXBP1-201ENST00000290178 IRX6P78412 446 aaPredicted RBP29.94■■■□□ 2.38
PAXBP1-201ENST00000290178 USP47Q96K76 1375 aa29.92■■■□□ 2.38
PAXBP1-201ENST00000290178 SHANK2Q9UPX8 1470 aa29.92■■■□□ 2.38
PAXBP1-201ENST00000290178 KIF15Q9NS87 1388 aa29.91■■■□□ 2.38
PAXBP1-201ENST00000290178 KDM2AQ9Y2K7 1162 aa29.88■■■□□ 2.37
PAXBP1-201ENST00000290178 BCORL1Q5H9F3 1711 aa29.86■■■□□ 2.37
PAXBP1-201ENST00000290178 POLR1AO95602 1720 aaPredicted RBP29.85■■■□□ 2.37
PAXBP1-201ENST00000290178 SAMD9LQ8IVG5 1584 aa29.81■■■□□ 2.36
PAXBP1-201ENST00000290178 CDC42BPBQ9Y5S2 1711 aa29.8■■■□□ 2.36
PAXBP1-201ENST00000290178 DHX29Q7Z478 1369 aaKnown RBP29.79■■■□□ 2.36
PAXBP1-201ENST00000290178 DCAF11Q8TEB1 546 aa29.79■■■□□ 2.36
PAXBP1-201ENST00000290178 CARD11Q9BXL7 1154 aa29.79■■■□□ 2.36
PAXBP1-201ENST00000290178 KDM5CP41229 1560 aa29.79■■■□□ 2.36
PAXBP1-201ENST00000290178 ARHGEF5Q12774 1597 aa29.79■■■□□ 2.36
PAXBP1-201ENST00000290178 CHD1O14646 1710 aa29.78■■■□□ 2.36
PAXBP1-201ENST00000290178 KDM5DQ9BY66 1539 aa29.76■■■□□ 2.36
PAXBP1-201ENST00000290178 CCDC141Q6ZP82 1450 aa29.76■■■□□ 2.36
PAXBP1-201ENST00000290178 UHRF1BP1Q6BDS2 1440 aa29.76■■■□□ 2.36
PAXBP1-201ENST00000290178 PREX2Q70Z35 1606 aa29.73■■■□□ 2.35
PAXBP1-201ENST00000290178 RALGAPBQ86X10 1494 aa29.73■■■□□ 2.35
PAXBP1-201ENST00000290178 ERCC6L2Q5T890 1561 aa29.71■■■□□ 2.35
PAXBP1-201ENST00000290178 ST20-MTHFSA0A0A6YYL1 179 aa29.7■■■□□ 2.35
PAXBP1-201ENST00000290178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.7■■■□□ 2.354e-7■■■□□ 15.5
PAXBP1-201ENST00000290178 ZBED9Q6R2W3 1325 aa29.7■■■□□ 2.35
PAXBP1-201ENST00000290178 SYCP2Q9BX26 1530 aa29.7■■■□□ 2.34
PAXBP1-201ENST00000290178 TTC37Q6PGP7 1564 aa29.69■■■□□ 2.34
PAXBP1-201ENST00000290178 FAM135AQ9P2D6 1515 aa29.69■■■□□ 2.34
PAXBP1-201ENST00000290178 ARHGAP5Q13017 1502 aa29.68■■■□□ 2.34
PAXBP1-201ENST00000290178 RSPH4AQ5TD94 716 aa29.67■■■□□ 2.34
PAXBP1-201ENST00000290178 ARHGEF12Q9NZN5 1544 aa29.67■■■□□ 2.34
PAXBP1-201ENST00000290178 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.66■■■□□ 2.34
PAXBP1-201ENST00000290178 SENP3-EIF4A1A0A087X0R7 540 aa29.66■■■□□ 2.34
PAXBP1-201ENST00000290178 RGL3Q3MIN7 710 aa29.65■■■□□ 2.34
PAXBP1-201ENST00000290178 RBM19Q9Y4C8 960 aaKnown RBP29.64■■■□□ 2.34
PAXBP1-201ENST00000290178 ARID4BQ4LE39 1312 aaPredicted RBP29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms