RNA–Protein interactions for RNA: ENST00000285106.10

CXXC1-201, Transcript of CXXC finger protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXXC1, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-201ENST00000285106 CHMP7Q8WUX9 453 aaPredicted RBP23.23■■□□□ 1.31
CXXC1-201ENST00000285106 KDM5BQ9UGL1 1544 aa23.23■■□□□ 1.31
CXXC1-201ENST00000285106 FOXD1Q16676 465 aa23.22■■□□□ 1.31
CXXC1-201ENST00000285106 FBLN2P98095 1184 aa23.22■■□□□ 1.31
CXXC1-201ENST00000285106 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
CXXC1-201ENST00000285106 EIF4G3O43432 1585 aaKnown RBP23.2■■□□□ 1.3
CXXC1-201ENST00000285106 DAPK1P53355 1430 aa23.19■■□□□ 1.3
CXXC1-201ENST00000285106 ABCC5O15440 1437 aa23.17■■□□□ 1.3
CXXC1-201ENST00000285106 HSPA5P11021 654 aaKnown RBP23.16■■□□□ 1.3
CXXC1-201ENST00000285106 RAPGEF6Q8TEU7 1601 aa23.16■■□□□ 1.3
CXXC1-201ENST00000285106 HNRNPUQ00839 825 aaKnown RBP eCLIP23.16■■□□□ 1.3
CXXC1-201ENST00000285106 L3MBTL2Q969R5 705 aa23.16■■□□□ 1.3
CXXC1-201ENST00000285106 ROCK1Q13464 1354 aa23.15■■□□□ 1.3
CXXC1-201ENST00000285106 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
CXXC1-201ENST00000285106 FANCIQ9NVI1 1328 aa23.13■■□□□ 1.29
CXXC1-201ENST00000285106 PRG4Q92954 1404 aaPredicted RBP23.13■■□□□ 1.29
CXXC1-201ENST00000285106 EIF4G2P78344 907 aaKnown RBP eCLIP23.12■■□□□ 1.29
CXXC1-201ENST00000285106 CFDP1Q9UEE9 299 aaPredicted RBP23.12■■□□□ 1.29
CXXC1-201ENST00000285106 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
CXXC1-201ENST00000285106 SLC4A1APQ9BWU0 796 aaKnown RBP23.11■■□□□ 1.29
CXXC1-201ENST00000285106 PLB1Q6P1J6 1458 aa23.1■■□□□ 1.29
CXXC1-201ENST00000285106 WASHC2AQ641Q2 1341 aa23.09■■□□□ 1.29
CXXC1-201ENST00000285106 TROQ12816 1431 aaPredicted RBP23.09■■□□□ 1.29
CXXC1-201ENST00000285106 DNMT1P26358 1616 aaKnown RBP23.09■■□□□ 1.29
CXXC1-201ENST00000285106 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
CXXC1-201ENST00000285106 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
CXXC1-201ENST00000285106 JPH4Q96JJ6 628 aa23.08■■□□□ 1.29
CXXC1-201ENST00000285106 ANKRD30BQ9BXX2 1392 aa23.08■■□□□ 1.28
CXXC1-201ENST00000285106 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
CXXC1-201ENST00000285106 CARMIL2Q6F5E8 1435 aa23.04■■□□□ 1.28
CXXC1-201ENST00000285106 CAMSAP2Q08AD1 1489 aa23.01■■□□□ 1.27
CXXC1-201ENST00000285106 RPRD2Q5VT52 1461 aaKnown RBP23.01■■□□□ 1.27
CXXC1-201ENST00000285106 GPATCH8Q9UKJ3 1502 aaKnown RBP23■■□□□ 1.27
CXXC1-201ENST00000285106 NBPF8Q3BBV2 869 aa23■■□□□ 1.27
CXXC1-201ENST00000285106 ERICH6Q7L0X2 663 aa22.98■■□□□ 1.27
CXXC1-201ENST00000285106 NCOA1Q15788 1441 aa22.98■■□□□ 1.27
CXXC1-201ENST00000285106 NUP160Q12769 1436 aa22.97■■□□□ 1.27
CXXC1-201ENST00000285106 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
CXXC1-201ENST00000285106 C11orf95C9JLR9 678 aaPredicted RBP22.96■■□□□ 1.27
CXXC1-201ENST00000285106 KIF14Q15058 1648 aa22.95■■□□□ 1.26
CXXC1-201ENST00000285106 CCDC184Q52MB2 194 aa22.94■■□□□ 1.26
CXXC1-201ENST00000285106 TEX14Q8IWB6 1497 aa22.94■■□□□ 1.26
CXXC1-201ENST00000285106 ERICH6BQ5W0A0 696 aa22.93■■□□□ 1.26
CXXC1-201ENST00000285106 PPP4R2Q9NY27 417 aa22.93■■□□□ 1.26
CXXC1-201ENST00000285106 ITSN2Q9NZM3 1697 aa22.92■■□□□ 1.26
CXXC1-201ENST00000285106 PZPP20742 1482 aa22.92■■□□□ 1.26
CXXC1-201ENST00000285106 CCDC7Q96M83 1385 aa22.91■■□□□ 1.26
CXXC1-201ENST00000285106 ANKRD30AQ9BXX3 1397 aa22.91■■□□□ 1.26
CXXC1-201ENST00000285106 CNTLNQ9NXG0 1405 aa22.91■■□□□ 1.26
CXXC1-201ENST00000285106 PKD2Q13563 968 aa22.88■■□□□ 1.25
CXXC1-201ENST00000285106 ADCY10Q96PN6 1610 aa22.87■■□□□ 1.25
CXXC1-201ENST00000285106 ADGRL2O95490 1459 aa22.86■■□□□ 1.25
CXXC1-201ENST00000285106 ATP10BO94823 1461 aa22.85■■□□□ 1.25
CXXC1-201ENST00000285106 ANKRD50Q9ULJ7 1429 aa22.85■■□□□ 1.25
CXXC1-201ENST00000285106 ZNF326Q5BKZ1 582 aaKnown RBP22.85■■□□□ 1.25
CXXC1-201ENST00000285106 KIAA1107Q9UPP5 1409 aa22.84■■□□□ 1.25
CXXC1-201ENST00000285106 B4GALNT3Q6L9W6 998 aa22.84■■□□□ 1.25
CXXC1-201ENST00000285106 ADGBQ8N7X0 1667 aa22.83■■□□□ 1.25
CXXC1-201ENST00000285106 PRKRIP1Q9H875 184 aaPredicted RBP22.83■■□□□ 1.25
CXXC1-201ENST00000285106 KIF7Q2M1P5 1343 aa22.83■■□□□ 1.24
CXXC1-201ENST00000285106 SPATA31E1Q6ZUB1 1445 aa22.82■■□□□ 1.24
CXXC1-201ENST00000285106 ABCA8O94911 1581 aa22.82■■□□□ 1.24
CXXC1-201ENST00000285106 TSPY4P0CV99 314 aa22.81■■□□□ 1.24
CXXC1-201ENST00000285106 TSPY10P0CW01 314 aa22.81■■□□□ 1.24
CXXC1-201ENST00000285106 FAM9BQ8IZU0 186 aa22.81■■□□□ 1.24
CXXC1-201ENST00000285106 ZBED9Q6R2W3 1325 aa22.79■■□□□ 1.24
CXXC1-201ENST00000285106 NUP155O75694 1391 aa22.79■■□□□ 1.24
CXXC1-201ENST00000285106 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
CXXC1-201ENST00000285106 C9orf84Q5VXU9 1444 aa22.78■■□□□ 1.24
CXXC1-201ENST00000285106 MRS2Q9HD23 443 aa22.78■■□□□ 1.24
CXXC1-201ENST00000285106 CROCC2H7BZ55 1655 aa22.78■■□□□ 1.24
CXXC1-201ENST00000285106 HNRNPMP52272 730 aaKnown RBP eCLIP22.77■■□□□ 1.24
CXXC1-201ENST00000285106 PTPRGP23470 1445 aa22.76■■□□□ 1.23
CXXC1-201ENST00000285106 CDC42BPAQ5VT25 1732 aa22.76■■□□□ 1.23
CXXC1-201ENST00000285106 POLR3GLQ9BT43 218 aa22.75■■□□□ 1.23
CXXC1-201ENST00000285106 MYT1LQ9UL68 1186 aa22.73■■□□□ 1.23
CXXC1-201ENST00000285106 USP47Q96K76 1375 aa22.72■■□□□ 1.23
CXXC1-201ENST00000285106 MBD5Q9P267 1494 aa22.72■■□□□ 1.23
CXXC1-201ENST00000285106 SHANK2Q9UPX8 1470 aa22.72■■□□□ 1.23
CXXC1-201ENST00000285106 KIF15Q9NS87 1388 aa22.7■■□□□ 1.22
CXXC1-201ENST00000285106 DEKP35659 375 aaKnown RBP22.7■■□□□ 1.22
CXXC1-201ENST00000285106 CNGB1Q14028 1251 aaPredicted RBP22.69■■□□□ 1.22
CXXC1-201ENST00000285106 KDM2AQ9Y2K7 1162 aa22.66■■□□□ 1.22
CXXC1-201ENST00000285106 NOP58Q9Y2X3 529 aaKnown RBP22.66■■□□□ 1.22
CXXC1-201ENST00000285106 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
CXXC1-201ENST00000285106 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
CXXC1-201ENST00000285106 POLR1AO95602 1720 aaPredicted RBP22.61■■□□□ 1.21
CXXC1-201ENST00000285106 DCAF11Q8TEB1 546 aa22.6■■□□□ 1.21
CXXC1-201ENST00000285106 UHRF1BP1Q6BDS2 1440 aa22.59■■□□□ 1.21
CXXC1-201ENST00000285106 CCDC141Q6ZP82 1450 aa22.59■■□□□ 1.21
CXXC1-201ENST00000285106 ARHGEF5Q12774 1597 aa22.59■■□□□ 1.21
CXXC1-201ENST00000285106 NBR1Q14596 966 aa22.59■■□□□ 1.21
CXXC1-201ENST00000285106 RSPH4AQ5TD94 716 aa22.59■■□□□ 1.21
CXXC1-201ENST00000285106 DHX29Q7Z478 1369 aaKnown RBP22.59■■□□□ 1.21
CXXC1-201ENST00000285106 KDM5DQ9BY66 1539 aa22.58■■□□□ 1.2
CXXC1-201ENST00000285106 BCORL1Q5H9F3 1711 aa22.58■■□□□ 1.2
CXXC1-201ENST00000285106 SMG6Q86US8 1419 aaKnown RBP22.57■■□□□ 1.2
CXXC1-201ENST00000285106 ARID4BQ4LE39 1312 aaPredicted RBP22.57■■□□□ 1.2
CXXC1-201ENST00000285106 RALGAPBQ86X10 1494 aa22.56■■□□□ 1.2
CXXC1-201ENST00000285106 KDM5CP41229 1560 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms