RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 FANCIQ9NVI1 1328 aa20■□□□□ 0.79
MSI2-201ENST00000284073 PDE4AP27815 886 aa19.96■□□□□ 0.79
MSI2-201ENST00000284073 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
MSI2-201ENST00000284073 SYAP1Q96A49 352 aaPredicted RBP19.95■□□□□ 0.78
MSI2-201ENST00000284073 CCNB3Q8WWL7 1395 aa19.94■□□□□ 0.78
MSI2-201ENST00000284073 RWDD1Q9H446 243 aaPredicted RBP19.94■□□□□ 0.78
MSI2-201ENST00000284073 FAM13BQ9NYF5 915 aa19.93■□□□□ 0.78
MSI2-201ENST00000284073 A0A0U1RQG5 324 aaPredicted RBP19.93■□□□□ 0.78
MSI2-201ENST00000284073 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
MSI2-201ENST00000284073 EEA1Q15075 1411 aa19.91■□□□□ 0.78
MSI2-201ENST00000284073 FOXD4L5Q5VV16 416 aaPredicted RBP19.9■□□□□ 0.78
MSI2-201ENST00000284073 ITPRIPQ8IWB1 547 aa19.9■□□□□ 0.78
MSI2-201ENST00000284073 FOXD4L4Q8WXT5 416 aaPredicted RBP19.9■□□□□ 0.78
MSI2-201ENST00000284073 TMF1P82094 1093 aa19.9■□□□□ 0.78
MSI2-201ENST00000284073 PRKCSHP14314 528 aaPredicted RBP19.89■□□□□ 0.78
MSI2-201ENST00000284073 ZNF771Q7L3S4 317 aaPredicted RBP19.89■□□□□ 0.77
MSI2-201ENST00000284073 PKNOX2Q96KN3 472 aa19.88■□□□□ 0.77
MSI2-201ENST00000284073 NOL8Q76FK4 1167 aaKnown RBP19.88■□□□□ 0.77
MSI2-201ENST00000284073 CFDP1Q9UEE9 299 aaPredicted RBP19.86■□□□□ 0.77
MSI2-201ENST00000284073 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
MSI2-201ENST00000284073 CFAP44Q96MT7 982 aa19.85■□□□□ 0.77
MSI2-201ENST00000284073 DDX11L8A8MPP1 907 aa19.85■□□□□ 0.77
MSI2-201ENST00000284073 KTN1Q86UP2 1357 aaKnown RBP19.85■□□□□ 0.77
MSI2-201ENST00000284073 GOLGA6L1Q8N7Z2 621 aa19.84■□□□□ 0.77
MSI2-201ENST00000284073 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
MSI2-201ENST00000284073 CLUAP1Q96AJ1 413 aa19.84■□□□□ 0.77
MSI2-201ENST00000284073 FOXD1Q16676 465 aa19.84■□□□□ 0.77
MSI2-201ENST00000284073 IL27Q8NEV9 243 aa19.84■□□□□ 0.77
MSI2-201ENST00000284073 DDX49Q9Y6V7 483 aaKnown RBP19.83■□□□□ 0.77
MSI2-201ENST00000284073 KIAA1211Q6ZU35 1233 aa19.83■□□□□ 0.76
MSI2-201ENST00000284073 BAZ1BQ9UIG0 1483 aaKnown RBP19.82■□□□□ 0.76
MSI2-201ENST00000284073 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
MSI2-201ENST00000284073 EXOC6Q8TAG9 804 aa19.81■□□□□ 0.76
MSI2-201ENST00000284073 NOC3LQ8WTT2 800 aaKnown RBP19.81■□□□□ 0.76
MSI2-201ENST00000284073 SETD5Q9C0A6 1442 aa19.81■□□□□ 0.76
MSI2-201ENST00000284073 PLIN1O60240 522 aa19.8■□□□□ 0.76
MSI2-201ENST00000284073 FAM161AQ3B820 660 aa19.8■□□□□ 0.76
MSI2-201ENST00000284073 GNL2Q13823 731 aaKnown RBP19.8■□□□□ 0.76
MSI2-201ENST00000284073 IPO8O15397 1037 aaKnown RBP19.8■□□□□ 0.76
MSI2-201ENST00000284073 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
MSI2-201ENST00000284073 CEP164Q9UPV0 1460 aa19.79■□□□□ 0.76
MSI2-201ENST00000284073 BRPF3Q9ULD4 1205 aa19.78■□□□□ 0.76
MSI2-201ENST00000284073 PLEKHD1A6NEE1 506 aa19.77■□□□□ 0.76
MSI2-201ENST00000284073 FOXD4L6Q3SYB3 417 aaPredicted RBP19.76■□□□□ 0.75
MSI2-201ENST00000284073 FOXD4L3Q6VB84 417 aaPredicted RBP19.76■□□□□ 0.75
MSI2-201ENST00000284073 POGKQ9P215 609 aa19.76■□□□□ 0.75
MSI2-201ENST00000284073 RALBP1Q15311 655 aa19.75■□□□□ 0.75
MSI2-201ENST00000284073 FAM43AQ8N2R8 423 aa19.75■□□□□ 0.75
MSI2-201ENST00000284073 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
MSI2-201ENST00000284073 CCDC146Q8IYE0 955 aa19.74■□□□□ 0.75
MSI2-201ENST00000284073 PHF14O94880 888 aa19.73■□□□□ 0.75
MSI2-201ENST00000284073 TPM4P67936 248 aa19.73■□□□□ 0.75
MSI2-201ENST00000284073 HSP90B1P14625 803 aaKnown RBP19.73■□□□□ 0.75
MSI2-201ENST00000284073 HTATSF1O43719 755 aaKnown RBP19.72■□□□□ 0.75
MSI2-201ENST00000284073 RAB3GAP2Q9H2M9 1393 aa19.72■□□□□ 0.75
MSI2-201ENST00000284073 NFKBIBQ15653 356 aa19.72■□□□□ 0.75
MSI2-201ENST00000284073 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
MSI2-201ENST00000284073 ZNF592Q92610 1267 aa19.72■□□□□ 0.75
MSI2-201ENST00000284073 SMC4Q9NTJ3 1288 aa19.71■□□□□ 0.75
MSI2-201ENST00000284073 CENPQQ7L2Z9 268 aaPredicted RBP19.71■□□□□ 0.75
MSI2-201ENST00000284073 U2AF1L5P0DN76 240 aaPredicted RBP19.7■□□□□ 0.74
MSI2-201ENST00000284073 U2AF1Q01081 240 aaKnown RBP eCLIP19.7■□□□□ 0.74
MSI2-201ENST00000284073 SKOR2Q2VWA4 1001 aaPredicted RBP19.7■□□□□ 0.74
MSI2-201ENST00000284073 WRNQ14191 1432 aaPredicted RBP eCLIP19.7■□□□□ 0.74
MSI2-201ENST00000284073 TRIM6-TRIM34B2RNG4 842 aa19.7■□□□□ 0.74
MSI2-201ENST00000284073 SOX12O15370 315 aa19.7■□□□□ 0.74
MSI2-201ENST00000284073 CRBNQ96SW2 442 aa19.7■□□□□ 0.74
MSI2-201ENST00000284073 CCAR2Q8N163 923 aaKnown RBP19.69■□□□□ 0.74
MSI2-201ENST00000284073 RRP1P56182 461 aaKnown RBP19.68■□□□□ 0.74
MSI2-201ENST00000284073 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.67■□□□□ 0.74
MSI2-201ENST00000284073 CHMP7Q8WUX9 453 aaPredicted RBP19.67■□□□□ 0.74
MSI2-201ENST00000284073 ST18O60284 1047 aa19.67■□□□□ 0.74
MSI2-201ENST00000284073 SETQ01105 290 aaPredicted RBP19.67■□□□□ 0.74
MSI2-201ENST00000284073 CENPJQ9HC77 1338 aaPredicted RBP19.67■□□□□ 0.74
MSI2-201ENST00000284073 CSPP1Q1MSJ5 1256 aa19.66■□□□□ 0.74
MSI2-201ENST00000284073 PDE3BQ13370 1112 aa19.66■□□□□ 0.74
MSI2-201ENST00000284073 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.742e-6■■■■□ 20
MSI2-201ENST00000284073 CLSTN1O94985 981 aa19.66■□□□□ 0.74
MSI2-201ENST00000284073 R3HCC1Q9Y3T6 440 aaKnown RBP19.66■□□□□ 0.74
MSI2-201ENST00000284073 CREBRFQ8IUR6 639 aa19.65■□□□□ 0.74
MSI2-201ENST00000284073 PODXL2Q9NZ53 605 aa19.64■□□□□ 0.73
MSI2-201ENST00000284073 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
MSI2-201ENST00000284073 BCL11BQ9C0K0 894 aaPredicted RBP19.63■□□□□ 0.73
MSI2-201ENST00000284073 PDE4CQ08493 712 aa19.63■□□□□ 0.73
MSI2-201ENST00000284073 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
MSI2-201ENST00000284073 LMOD2Q6P5Q4 547 aa19.61■□□□□ 0.73
MSI2-201ENST00000284073 PKD2Q13563 968 aa19.61■□□□□ 0.73
MSI2-201ENST00000284073 NLRP13Q86W25 1043 aa19.6■□□□□ 0.73
MSI2-201ENST00000284073 SOGA1O94964 1423 aa19.6■□□□□ 0.73
MSI2-201ENST00000284073 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
MSI2-201ENST00000284073 ZBED9Q6R2W3 1325 aa19.59■□□□□ 0.73
MSI2-201ENST00000284073 PAK3O75914 559 aaPredicted RBP19.59■□□□□ 0.73
MSI2-201ENST00000284073 RBM10P98175 930 aaKnown RBP19.59■□□□□ 0.73
MSI2-201ENST00000284073 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.73
MSI2-201ENST00000284073 ROCK2O75116 1388 aaKnown RBP19.58■□□□□ 0.72
MSI2-201ENST00000284073 PATL2C9JE40 543 aaKnown RBP19.57■□□□□ 0.72
MSI2-201ENST00000284073 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
MSI2-201ENST00000284073 TPM3P06753 285 aa19.57■□□□□ 0.72
MSI2-201ENST00000284073 L3MBTL2Q969R5 705 aa19.57■□□□□ 0.72
MSI2-201ENST00000284073 GOLGA6L19H0YKK7 550 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms