RNA–Protein interactions for RNA: ENST00000275603.8

CCT6A-201, Transcript of chaperonin containing TCP1 subunit 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT6A, Length 2,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6A-201ENST00000275603 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
CCT6A-201ENST00000275603 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
CCT6A-201ENST00000275603 CDK13Q14004 1512 aaKnown RBP22.86■■□□□ 1.25
CCT6A-201ENST00000275603 NUP153P49790 1475 aaKnown RBP22.86■■□□□ 1.25
CCT6A-201ENST00000275603 PLB1Q6P1J6 1458 aa22.86■■□□□ 1.25
CCT6A-201ENST00000275603 CNGB1Q14028 1251 aaPredicted RBP22.86■■□□□ 1.25
CCT6A-201ENST00000275603 PPP4R2Q9NY27 417 aa22.86■■□□□ 1.25
CCT6A-201ENST00000275603 EHBP1L1Q8N3D4 1523 aa22.83■■□□□ 1.25
CCT6A-201ENST00000275603 MAGI3Q5TCQ9 1506 aa22.83■■□□□ 1.25
CCT6A-201ENST00000275603 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.25
CCT6A-201ENST00000275603 PTPRGP23470 1445 aa22.82■■□□□ 1.24
CCT6A-201ENST00000275603 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
CCT6A-201ENST00000275603 NOP58Q9Y2X3 529 aaKnown RBP22.81■■□□□ 1.24
CCT6A-201ENST00000275603 NCOA2Q15596 1464 aa22.79■■□□□ 1.24
CCT6A-201ENST00000275603 SUPT6HQ7KZ85 1726 aaKnown RBP22.78■■□□□ 1.24
CCT6A-201ENST00000275603 ABCA8O94911 1581 aa22.77■■□□□ 1.24
CCT6A-201ENST00000275603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.24
CCT6A-201ENST00000275603 RTN4Q9NQC3 1192 aaKnown RBP22.77■■□□□ 1.24
CCT6A-201ENST00000275603 HSPA5P11021 654 aaKnown RBP22.76■■□□□ 1.23
CCT6A-201ENST00000275603 SALL2Q9Y467 1007 aaPredicted RBP22.76■■□□□ 1.23
CCT6A-201ENST00000275603 ERCC6L2Q5T890 1561 aa22.75■■□□□ 1.23
CCT6A-201ENST00000275603 C11orf95C9JLR9 678 aaPredicted RBP22.73■■□□□ 1.23
CCT6A-201ENST00000275603 CCDC136Q96JN2 1154 aa22.73■■□□□ 1.23
CCT6A-201ENST00000275603 FGD6Q6ZV73 1430 aa22.72■■□□□ 1.23
CCT6A-201ENST00000275603 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
CCT6A-201ENST00000275603 IL27Q8NEV9 243 aa22.72■■□□□ 1.23
CCT6A-201ENST00000275603 MYOM3Q5VTT5 1437 aa22.7■■□□□ 1.22
CCT6A-201ENST00000275603 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
CCT6A-201ENST00000275603 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
CCT6A-201ENST00000275603 MRS2Q9HD23 443 aa22.68■■□□□ 1.22
CCT6A-201ENST00000275603 ATP10BO94823 1461 aa22.67■■□□□ 1.22
CCT6A-201ENST00000275603 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
CCT6A-201ENST00000275603 TROQ12816 1431 aaPredicted RBP22.65■■□□□ 1.22
CCT6A-201ENST00000275603 PLEKHD1A6NEE1 506 aa22.63■■□□□ 1.21
CCT6A-201ENST00000275603 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
CCT6A-201ENST00000275603 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
CCT6A-201ENST00000275603 FOXD1Q16676 465 aa22.6■■□□□ 1.21
CCT6A-201ENST00000275603 PRKRIP1Q9H875 184 aaPredicted RBP22.6■■□□□ 1.21
CCT6A-201ENST00000275603 MYT1LQ9UL68 1186 aa22.6■■□□□ 1.21
CCT6A-201ENST00000275603 PTPN23Q9H3S7 1636 aa22.6■■□□□ 1.21
CCT6A-201ENST00000275603 KDM5BQ9UGL1 1544 aa22.59■■□□□ 1.21
CCT6A-201ENST00000275603 CHIC2Q9UKJ5 165 aa22.59■■□□□ 1.21
CCT6A-201ENST00000275603 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.58■■□□□ 1.2
CCT6A-201ENST00000275603 NAIPQ13075 1403 aa22.57■■□□□ 1.2
CCT6A-201ENST00000275603 RRP7BPQ9NSQ0 103 aa22.57■■□□□ 1.2
CCT6A-201ENST00000275603 ERICH6BQ5W0A0 696 aa22.57■■□□□ 1.2
CCT6A-201ENST00000275603 MIA2Q96PC5 1412 aa22.56■■□□□ 1.2
CCT6A-201ENST00000275603 ABCC2Q92887 1545 aa22.56■■□□□ 1.2
CCT6A-201ENST00000275603 NPM2Q86SE8 214 aaKnown RBP22.56■■□□□ 1.2
CCT6A-201ENST00000275603 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
CCT6A-201ENST00000275603 IPO9Q96P70 1041 aaKnown RBP22.53■■□□□ 1.2
CCT6A-201ENST00000275603 TCOF1Q13428 1488 aaKnown RBP22.53■■□□□ 1.2
CCT6A-201ENST00000275603 ZBED9Q6R2W3 1325 aa22.53■■□□□ 1.2
CCT6A-201ENST00000275603 KIF14Q15058 1648 aa22.52■■□□□ 1.2
CCT6A-201ENST00000275603 EIF4G2P78344 907 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCT6A-201ENST00000275603 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
CCT6A-201ENST00000275603 LAS1LQ9Y4W2 734 aaKnown RBP22.51■■□□□ 1.19
CCT6A-201ENST00000275603 ZBTB47Q9UFB7 747 aaPredicted RBP22.51■■□□□ 1.19
CCT6A-201ENST00000275603 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
CCT6A-201ENST00000275603 ANP32AP39687 249 aaKnown RBP22.5■■□□□ 1.19
CCT6A-201ENST00000275603 CNTLNQ9NXG0 1405 aa22.49■■□□□ 1.19
CCT6A-201ENST00000275603 POLR3GLQ9BT43 218 aa22.48■■□□□ 1.19
CCT6A-201ENST00000275603 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
CCT6A-201ENST00000275603 L3MBTL2Q969R5 705 aa22.46■■□□□ 1.19
CCT6A-201ENST00000275603 CFDP1Q9UEE9 299 aaPredicted RBP22.46■■□□□ 1.19
CCT6A-201ENST00000275603 ABCC10Q5T3U5 1492 aa22.44■■□□□ 1.18
CCT6A-201ENST00000275603 ZNF644Q9H582 1327 aaPredicted RBP22.44■■□□□ 1.18
CCT6A-201ENST00000275603 ITSN2Q9NZM3 1697 aa22.42■■□□□ 1.18
CCT6A-201ENST00000275603 CCDC7Q96M83 1385 aa22.42■■□□□ 1.18
CCT6A-201ENST00000275603 NBPF8Q3BBV2 869 aa22.42■■□□□ 1.18
CCT6A-201ENST00000275603 ZCCHC11Q5TAX3 1644 aaKnown RBP22.4■■□□□ 1.18
CCT6A-201ENST00000275603 DENND4BO75064 1496 aaPredicted RBP22.39■■□□□ 1.18
CCT6A-201ENST00000275603 SKAP1Q86WV1 359 aa22.38■■□□□ 1.17
CCT6A-201ENST00000275603 ZNF777Q9ULD5 760 aaPredicted RBP22.38■■□□□ 1.17
CCT6A-201ENST00000275603 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
CCT6A-201ENST00000275603 KIF7Q2M1P5 1343 aa22.37■■□□□ 1.17
CCT6A-201ENST00000275603 CAMSAP2Q08AD1 1489 aa22.35■■□□□ 1.17
CCT6A-201ENST00000275603 NEFMP07197 916 aa22.34■■□□□ 1.17
CCT6A-201ENST00000275603 DAPK1P53355 1430 aa22.33■■□□□ 1.17
CCT6A-201ENST00000275603 NUDCQ9Y266 331 aa22.33■■□□□ 1.17
CCT6A-201ENST00000275603 ABCC5O15440 1437 aa22.33■■□□□ 1.17
CCT6A-201ENST00000275603 NCOA1Q15788 1441 aa22.33■■□□□ 1.16
CCT6A-201ENST00000275603 KDM6BO15054 1643 aa22.32■■□□□ 1.16
CCT6A-201ENST00000275603 DNMT1P26358 1616 aaKnown RBP22.32■■□□□ 1.16
CCT6A-201ENST00000275603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.3■■□□□ 1.161e-12■■■□□ 15.9
CCT6A-201ENST00000275603 MPHOSPH9Q99550 1183 aa22.29■■□□□ 1.16
CCT6A-201ENST00000275603 GCC2Q8IWJ2 1684 aa22.28■■□□□ 1.16
CCT6A-201ENST00000275603 SMG6Q86US8 1419 aaKnown RBP22.28■■□□□ 1.16
CCT6A-201ENST00000275603 TTC37Q6PGP7 1564 aa22.28■■□□□ 1.16
CCT6A-201ENST00000275603 EXOC6Q8TAG9 804 aa22.27■■□□□ 1.16
CCT6A-201ENST00000275603 BRPF3Q9ULD4 1205 aa22.27■■□□□ 1.16
CCT6A-201ENST00000275603 PREX2Q70Z35 1606 aa22.25■■□□□ 1.15
CCT6A-201ENST00000275603 CDC42BPBQ9Y5S2 1711 aa22.25■■□□□ 1.15
CCT6A-201ENST00000275603 ZNF326Q5BKZ1 582 aaKnown RBP22.25■■□□□ 1.15
CCT6A-201ENST00000275603 ROCK1Q13464 1354 aa22.25■■□□□ 1.15
CCT6A-201ENST00000275603 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
CCT6A-201ENST00000275603 RNF123Q5XPI4 1314 aa22.23■■□□□ 1.15
CCT6A-201ENST00000275603 WDR7Q9Y4E6 1490 aa22.22■■□□□ 1.15
CCT6A-201ENST00000275603 SLC4A3P48751 1232 aa22.21■■□□□ 1.15
CCT6A-201ENST00000275603 HNRNPMP52272 730 aaKnown RBP eCLIP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms