RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 HECW1Q76N89 1606 aa25.45■■□□□ 1.67
SSC4D-201ENST00000275560 EHBP1L1Q8N3D4 1523 aa25.44■■□□□ 1.66
SSC4D-201ENST00000275560 SAMD9Q5K651 1589 aa25.44■■□□□ 1.66
SSC4D-201ENST00000275560 GCC2Q8IWJ2 1684 aa25.41■■□□□ 1.66
SSC4D-201ENST00000275560 ARHGEF11O15085 1522 aa25.36■■□□□ 1.65
SSC4D-201ENST00000275560 CCDC136Q96JN2 1154 aa25.36■■□□□ 1.65
SSC4D-201ENST00000275560 TCOF1Q13428 1488 aaKnown RBP25.33■■□□□ 1.65
SSC4D-201ENST00000275560 ZNF326Q5BKZ1 582 aaKnown RBP25.33■■□□□ 1.65
SSC4D-201ENST00000275560 MYT1LQ9UL68 1186 aa25.33■■□□□ 1.65
SSC4D-201ENST00000275560 ANKRD30BQ9BXX2 1392 aa25.32■■□□□ 1.64
SSC4D-201ENST00000275560 SPATA31E1Q6ZUB1 1445 aa25.31■■□□□ 1.64
SSC4D-201ENST00000275560 NUDCQ9Y266 331 aa25.3■■□□□ 1.64
SSC4D-201ENST00000275560 CDK13Q14004 1512 aaKnown RBP25.3■■□□□ 1.64
SSC4D-201ENST00000275560 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
SSC4D-201ENST00000275560 SMG6Q86US8 1419 aaKnown RBP25.3■■□□□ 1.64
SSC4D-201ENST00000275560 SLC4A1APQ9BWU0 796 aaKnown RBP25.29■■□□□ 1.64
SSC4D-201ENST00000275560 RPRD2Q5VT52 1461 aaKnown RBP25.29■■□□□ 1.64
SSC4D-201ENST00000275560 THOC2Q8NI27 1593 aaKnown RBP25.28■■□□□ 1.64
SSC4D-201ENST00000275560 ZNF644Q9H582 1327 aaPredicted RBP25.28■■□□□ 1.64
SSC4D-201ENST00000275560 DHX29Q7Z478 1369 aaKnown RBP25.26■■□□□ 1.63
SSC4D-201ENST00000275560 GAPVD1Q14C86 1478 aa25.25■■□□□ 1.63
SSC4D-201ENST00000275560 ANP32AP39687 249 aaKnown RBP25.25■■□□□ 1.63
SSC4D-201ENST00000275560 URB2Q14146 1524 aaKnown RBP25.25■■□□□ 1.63
SSC4D-201ENST00000275560 IPO9Q96P70 1041 aaKnown RBP25.25■■□□□ 1.63
SSC4D-201ENST00000275560 EPRSP07814 1512 aaKnown RBP25.22■■□□□ 1.63
SSC4D-201ENST00000275560 NPM2Q86SE8 214 aaKnown RBP25.2■■□□□ 1.62
SSC4D-201ENST00000275560 RNF123Q5XPI4 1314 aa25.2■■□□□ 1.62
SSC4D-201ENST00000275560 ZBTB47Q9UFB7 747 aaPredicted RBP25.2■■□□□ 1.62
SSC4D-201ENST00000275560 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
SSC4D-201ENST00000275560 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
SSC4D-201ENST00000275560 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
SSC4D-201ENST00000275560 POLR1AO95602 1720 aaPredicted RBP25.17■■□□□ 1.62
SSC4D-201ENST00000275560 DAPK1P53355 1430 aa25.16■■□□□ 1.62
SSC4D-201ENST00000275560 SALL2Q9Y467 1007 aaPredicted RBP25.15■■□□□ 1.62
SSC4D-201ENST00000275560 USP47Q96K76 1375 aa25.15■■□□□ 1.62
SSC4D-201ENST00000275560 MIA2Q96PC5 1412 aa25.15■■□□□ 1.62
SSC4D-201ENST00000275560 RTL5Q5HYW3 569 aaPredicted RBP25.13■■□□□ 1.61
SSC4D-201ENST00000275560 PNISRQ8TF01 805 aaKnown RBP25.13■■□□□ 1.61
SSC4D-201ENST00000275560 TMC1Q8TDI8 760 aa25.13■■□□□ 1.61
SSC4D-201ENST00000275560 ABCC5O15440 1437 aa25.13■■□□□ 1.61
SSC4D-201ENST00000275560 EXOC6Q8TAG9 804 aa25.09■■□□□ 1.61
SSC4D-201ENST00000275560 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
SSC4D-201ENST00000275560 LAS1LQ9Y4W2 734 aaKnown RBP25.07■■□□□ 1.6
SSC4D-201ENST00000275560 ROCK1Q13464 1354 aa25.04■■□□□ 1.6
SSC4D-201ENST00000275560 PZPP20742 1482 aa25.04■■□□□ 1.6
SSC4D-201ENST00000275560 IL27Q8NEV9 243 aa25.04■■□□□ 1.6
SSC4D-201ENST00000275560 WDR62O43379 1518 aa25.03■■□□□ 1.6
SSC4D-201ENST00000275560 ANO8Q9HCE9 1232 aaPredicted RBP25.02■■□□□ 1.6
SSC4D-201ENST00000275560 RTN4Q9NQC3 1192 aaKnown RBP25.02■■□□□ 1.6
SSC4D-201ENST00000275560 SKAP1Q86WV1 359 aa25.01■■□□□ 1.59
SSC4D-201ENST00000275560 DNMT1P26358 1616 aaKnown RBP25.01■■□□□ 1.59
SSC4D-201ENST00000275560 PKD2Q13563 968 aa25.01■■□□□ 1.59
SSC4D-201ENST00000275560 RRP1P56182 461 aaKnown RBP25■■□□□ 1.59
SSC4D-201ENST00000275560 ZNF777Q9ULD5 760 aaPredicted RBP25■■□□□ 1.59
SSC4D-201ENST00000275560 MBD5Q9P267 1494 aa24.99■■□□□ 1.59
SSC4D-201ENST00000275560 IQGAP2Q13576 1575 aa24.99■■□□□ 1.59
SSC4D-201ENST00000275560 KDM2AQ9Y2K7 1162 aa24.98■■□□□ 1.59
SSC4D-201ENST00000275560 CARD11Q9BXL7 1154 aa24.96■■□□□ 1.59
SSC4D-201ENST00000275560 KDM5CP41229 1560 aa24.96■■□□□ 1.59
SSC4D-201ENST00000275560 PDE4AP27815 886 aa24.95■■□□□ 1.59
SSC4D-201ENST00000275560 DNAJC5BQ9UF47 199 aa24.95■■□□□ 1.59
SSC4D-201ENST00000275560 ST20-MTHFSA0A0A6YYL1 179 aa24.94■■□□□ 1.58
SSC4D-201ENST00000275560 NEFMP07197 916 aa24.93■■□□□ 1.58
SSC4D-201ENST00000275560 RCAN3Q9UKA8 241 aa24.93■■□□□ 1.58
SSC4D-201ENST00000275560 KIAA1107Q9UPP5 1409 aa24.92■■□□□ 1.58
SSC4D-201ENST00000275560 PLIN1O60240 522 aa24.91■■□□□ 1.58
SSC4D-201ENST00000275560 LRPPRCP42704 1394 aaKnown RBP24.91■■□□□ 1.58
SSC4D-201ENST00000275560 CDCA7LQ96GN5 454 aa24.91■■□□□ 1.58
SSC4D-201ENST00000275560 KIF14Q15058 1648 aa24.89■■□□□ 1.58
SSC4D-201ENST00000275560 KIF15Q9NS87 1388 aa24.89■■□□□ 1.58
SSC4D-201ENST00000275560 CFDP1Q9UEE9 299 aaPredicted RBP24.89■■□□□ 1.57
SSC4D-201ENST00000275560 MYBBP1AQ9BQG0 1328 aaKnown RBP24.88■■□□□ 1.57
SSC4D-201ENST00000275560 TARBP1Q13395 1621 aaKnown RBP24.87■■□□□ 1.57
SSC4D-201ENST00000275560 TCERG1O14776 1098 aaKnown RBP24.87■■□□□ 1.57
SSC4D-201ENST00000275560 BACH2Q9BYV9 841 aa24.87■■□□□ 1.57
SSC4D-201ENST00000275560 PRKCSHP14314 528 aaPredicted RBP24.86■■□□□ 1.57
SSC4D-201ENST00000275560 PRG4Q92954 1404 aaPredicted RBP24.86■■□□□ 1.57
SSC4D-201ENST00000275560 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
SSC4D-201ENST00000275560 NUP153P49790 1475 aaKnown RBP24.85■■□□□ 1.57
SSC4D-201ENST00000275560 CAMSAP2Q08AD1 1489 aa24.84■■□□□ 1.57
SSC4D-201ENST00000275560 PBRM1Q86U86 1689 aa24.84■■□□□ 1.57
SSC4D-201ENST00000275560 ARID4BQ4LE39 1312 aaPredicted RBP24.83■■□□□ 1.57
SSC4D-201ENST00000275560 BRD4O60885 1362 aaPredicted RBP24.83■■□□□ 1.57
SSC4D-201ENST00000275560 ROCK2O75116 1388 aaKnown RBP24.82■■□□□ 1.56
SSC4D-201ENST00000275560 DCAF11Q8TEB1 546 aa24.81■■□□□ 1.56
SSC4D-201ENST00000275560 RALGAPBQ86X10 1494 aa24.79■■□□□ 1.56
SSC4D-201ENST00000275560 RALBP1Q15311 655 aa24.78■■□□□ 1.56
SSC4D-201ENST00000275560 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
SSC4D-201ENST00000275560 NUP155O75694 1391 aa24.78■■□□□ 1.56
SSC4D-201ENST00000275560 SLC4A3P48751 1232 aa24.77■■□□□ 1.56
SSC4D-201ENST00000275560 CRBNQ96SW2 442 aa24.76■■□□□ 1.55
SSC4D-201ENST00000275560 DISP1Q96F81 1524 aa24.75■■□□□ 1.55
SSC4D-201ENST00000275560 ANKRD50Q9ULJ7 1429 aa24.74■■□□□ 1.55
SSC4D-201ENST00000275560 CC2D1BQ5T0F9 858 aaKnown RBP24.74■■□□□ 1.55
SSC4D-201ENST00000275560 UHRF1BP1Q6BDS2 1440 aa24.73■■□□□ 1.55
SSC4D-201ENST00000275560 KIAA0586Q9BVV6 1533 aa24.73■■□□□ 1.55
SSC4D-201ENST00000275560 NLRP13Q86W25 1043 aa24.72■■□□□ 1.55
SSC4D-201ENST00000275560 GPATCH8Q9UKJ3 1502 aaKnown RBP24.72■■□□□ 1.55
SSC4D-201ENST00000275560 ADGBQ8N7X0 1667 aa24.71■■□□□ 1.55
SSC4D-201ENST00000275560 KIAA0556O60303 1618 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms