RNA–Protein interactions for RNA: ENST00000273582.9

RUBCN-201, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RUBCN, Length 6,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-201ENST00000273582 TRIM52Q96A61 297 aa13.43□□□□□ -0.26
RUBCN-201ENST00000273582 NUP160Q12769 1436 aa13.43□□□□□ -0.26
RUBCN-201ENST00000273582 IQGAP2Q13576 1575 aa13.43□□□□□ -0.26
RUBCN-201ENST00000273582 NGEFQ8N5V2 710 aa13.42□□□□□ -0.26
RUBCN-201ENST00000273582 SHANK2Q9UPX8 1470 aa13.42□□□□□ -0.26
RUBCN-201ENST00000273582 HECW1Q76N89 1606 aa13.42□□□□□ -0.26
RUBCN-201ENST00000273582 PDE3BQ13370 1112 aa13.42□□□□□ -0.26
RUBCN-201ENST00000273582 PTPN23Q9H3S7 1636 aa13.41□□□□□ -0.26
RUBCN-201ENST00000273582 ANKRD50Q9ULJ7 1429 aa13.41□□□□□ -0.26
RUBCN-201ENST00000273582 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
RUBCN-201ENST00000273582 HSPA5P11021 654 aaKnown RBP13.4□□□□□ -0.26
RUBCN-201ENST00000273582 KIAA1107Q9UPP5 1409 aa13.4□□□□□ -0.26
RUBCN-201ENST00000273582 ABCC5O15440 1437 aa13.4□□□□□ -0.27
RUBCN-201ENST00000273582 ARHGEF12Q9NZN5 1544 aa13.39□□□□□ -0.27
RUBCN-201ENST00000273582 PPP4R2Q9NY27 417 aa13.39□□□□□ -0.27
RUBCN-201ENST00000273582 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
RUBCN-201ENST00000273582 DAPK1P53355 1430 aa13.39□□□□□ -0.27
RUBCN-201ENST00000273582 UHRF1BP1Q6BDS2 1440 aa13.38□□□□□ -0.27
RUBCN-201ENST00000273582 FANCIQ9NVI1 1328 aa13.38□□□□□ -0.27
RUBCN-201ENST00000273582 GRIN2AQ12879 1464 aa13.38□□□□□ -0.27
RUBCN-201ENST00000273582 GPRASP1Q5JY77 1395 aa13.38□□□□□ -0.27
RUBCN-201ENST00000273582 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
RUBCN-201ENST00000273582 HNRNPUQ00839 825 aaKnown RBP eCLIP13.37□□□□□ -0.27
RUBCN-201ENST00000273582 RRP7BPQ9NSQ0 103 aa13.37□□□□□ -0.27
RUBCN-201ENST00000273582 NUP153P49790 1475 aaKnown RBP13.37□□□□□ -0.27
RUBCN-201ENST00000273582 ZMYM4Q5VZL5 1548 aa13.36□□□□□ -0.27
RUBCN-201ENST00000273582 PTPRGP23470 1445 aa13.36□□□□□ -0.27
RUBCN-201ENST00000273582 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
RUBCN-201ENST00000273582 RALBP1Q15311 655 aa13.35□□□□□ -0.27
RUBCN-201ENST00000273582 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
RUBCN-201ENST00000273582 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
RUBCN-201ENST00000273582 FKBP8Q14318 412 aa13.34□□□□□ -0.27
RUBCN-201ENST00000273582 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
RUBCN-201ENST00000273582 PLEKHH2Q8IVE3 1493 aa13.34□□□□□ -0.27
RUBCN-201ENST00000273582 KDM5BQ9UGL1 1544 aa13.34□□□□□ -0.27
RUBCN-201ENST00000273582 RNF123Q5XPI4 1314 aa13.33□□□□□ -0.28
RUBCN-201ENST00000273582 DISP1Q96F81 1524 aa13.32□□□□□ -0.28
RUBCN-201ENST00000273582 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
RUBCN-201ENST00000273582 WDR62O43379 1518 aa13.32□□□□□ -0.28
RUBCN-201ENST00000273582 SUPT6HQ7KZ85 1726 aaKnown RBP13.32□□□□□ -0.28
RUBCN-201ENST00000273582 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
RUBCN-201ENST00000273582 PRDM2Q13029 1718 aa13.31□□□□□ -0.28
RUBCN-201ENST00000273582 NLRP13Q86W25 1043 aa13.31□□□□□ -0.28
RUBCN-201ENST00000273582 ADAMTS12P58397 1594 aa13.31□□□□□ -0.28
RUBCN-201ENST00000273582 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
RUBCN-201ENST00000273582 BCANQ96GW7 911 aa13.3□□□□□ -0.28
RUBCN-201ENST00000273582 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
RUBCN-201ENST00000273582 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
RUBCN-201ENST00000273582 ATP10AO60312 1499 aa13.29□□□□□ -0.28
RUBCN-201ENST00000273582 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
RUBCN-201ENST00000273582 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
RUBCN-201ENST00000273582 PKD2Q13563 968 aa13.28□□□□□ -0.28
RUBCN-201ENST00000273582 NUP155O75694 1391 aa13.28□□□□□ -0.28
RUBCN-201ENST00000273582 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.29
RUBCN-201ENST00000273582 NBPF8Q3BBV2 869 aa13.26□□□□□ -0.29
RUBCN-201ENST00000273582 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
RUBCN-201ENST00000273582 USP47Q96K76 1375 aa13.25□□□□□ -0.29
RUBCN-201ENST00000273582 KIF15Q9NS87 1388 aa13.24□□□□□ -0.29
RUBCN-201ENST00000273582 EFCAB2Q5VUJ9 269 aa13.24□□□□□ -0.29
RUBCN-201ENST00000273582 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
RUBCN-201ENST00000273582 PNISRQ8TF01 805 aaKnown RBP13.23□□□□□ -0.29
RUBCN-201ENST00000273582 SMG6Q86US8 1419 aaKnown RBP13.23□□□□□ -0.29
RUBCN-201ENST00000273582 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
RUBCN-201ENST00000273582 MAGI3Q5TCQ9 1506 aa13.22□□□□□ -0.29
RUBCN-201ENST00000273582 LRPPRCP42704 1394 aaKnown RBP13.22□□□□□ -0.29
RUBCN-201ENST00000273582 RALGAPBQ86X10 1494 aa13.22□□□□□ -0.29
RUBCN-201ENST00000273582 RBM19Q9Y4C8 960 aaKnown RBP13.21□□□□□ -0.29
RUBCN-201ENST00000273582 PZPP20742 1482 aa13.21□□□□□ -0.3
RUBCN-201ENST00000273582 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.3
RUBCN-201ENST00000273582 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
RUBCN-201ENST00000273582 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
RUBCN-201ENST00000273582 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
RUBCN-201ENST00000273582 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
RUBCN-201ENST00000273582 KDM5DQ9BY66 1539 aa13.19□□□□□ -0.3
RUBCN-201ENST00000273582 CARD11Q9BXL7 1154 aa13.19□□□□□ -0.3
RUBCN-201ENST00000273582 EIF5BO60841 1220 aaKnown RBP13.18□□□□□ -0.3
RUBCN-201ENST00000273582 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
RUBCN-201ENST00000273582 KIAA0556O60303 1618 aa13.18□□□□□ -0.3
RUBCN-201ENST00000273582 CCDC141Q6ZP82 1450 aa13.17□□□□□ -0.3
RUBCN-201ENST00000273582 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
RUBCN-201ENST00000273582 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
RUBCN-201ENST00000273582 SBNO2Q9Y2G9 1366 aa13.17□□□□□ -0.3
RUBCN-201ENST00000273582 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
RUBCN-201ENST00000273582 CCDC144AA2RUR9 1427 aa13.16□□□□□ -0.3
RUBCN-201ENST00000273582 MS4A1P11836 297 aa13.16□□□□□ -0.3
RUBCN-201ENST00000273582 KCNH8Q96L42 1107 aa13.16□□□□□ -0.3
RUBCN-201ENST00000273582 DNMT1P26358 1616 aaKnown RBP13.15□□□□□ -0.3
RUBCN-201ENST00000273582 ZNF644Q9H582 1327 aaPredicted RBP13.15□□□□□ -0.3
RUBCN-201ENST00000273582 AAMPQ13685 434 aa13.14□□□□□ -0.31
RUBCN-201ENST00000273582 CAMSAP2Q08AD1 1489 aa13.14□□□□□ -0.31
RUBCN-201ENST00000273582 CDK13Q14004 1512 aaKnown RBP13.14□□□□□ -0.31
RUBCN-201ENST00000273582 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
RUBCN-201ENST00000273582 ATP10BO94823 1461 aa13.12□□□□□ -0.31
RUBCN-201ENST00000273582 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
RUBCN-201ENST00000273582 PARD3Q8TEW0 1356 aa13.12□□□□□ -0.31
RUBCN-201ENST00000273582 CTTNBP2Q8WZ74 1663 aa13.11□□□□□ -0.31
RUBCN-201ENST00000273582 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
RUBCN-201ENST00000273582 PLB1Q6P1J6 1458 aa13.1□□□□□ -0.31
RUBCN-201ENST00000273582 TCERG1O14776 1098 aaKnown RBP13.1□□□□□ -0.31
RUBCN-201ENST00000273582 ARAP3Q8WWN8 1544 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms