RNA–Protein interactions for RNA: ENST00000270583.9

KLHDC4-201, Transcript of kelch domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KLHDC4, Length 1,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-201ENST00000270583 ZNF777Q9ULD5 760 aaPredicted RBP29.8■■■□□ 2.36
KLHDC4-201ENST00000270583 ARHGAP5Q13017 1502 aa29.8■■■□□ 2.36
KLHDC4-201ENST00000270583 PLCH2O75038 1416 aa29.78■■■□□ 2.36
KLHDC4-201ENST00000270583 ITGAEP38570 1179 aa29.76■■■□□ 2.36
KLHDC4-201ENST00000270583 CAMSAP2Q08AD1 1489 aa29.76■■■□□ 2.35
KLHDC4-201ENST00000270583 ZNF644Q9H582 1327 aaPredicted RBP29.76■■■□□ 2.35
KLHDC4-201ENST00000270583 DIP2BQ9P265 1576 aa29.74■■■□□ 2.35
KLHDC4-201ENST00000270583 ARAP3Q8WWN8 1544 aa29.72■■■□□ 2.35
KLHDC4-201ENST00000270583 GLI2P10070 1586 aa29.72■■■□□ 2.35
KLHDC4-201ENST00000270583 CD109Q6YHK3 1445 aa29.71■■■□□ 2.35
KLHDC4-201ENST00000270583 SAMD9LQ8IVG5 1584 aa29.7■■■□□ 2.34
KLHDC4-201ENST00000270583 EFCAB2Q5VUJ9 269 aa29.69■■■□□ 2.34
KLHDC4-201ENST00000270583 FAM69CQ0P6D2 419 aa29.68■■■□□ 2.34
KLHDC4-201ENST00000270583 MAP3K4Q9Y6R4 1608 aa29.67■■■□□ 2.34
KLHDC4-201ENST00000270583 FANCAO15360 1455 aa29.64■■■□□ 2.34
KLHDC4-201ENST00000270583 DNMT1P26358 1616 aaKnown RBP29.64■■■□□ 2.34
KLHDC4-201ENST00000270583 KIF13AQ9H1H9 1805 aa29.63■■■□□ 2.33
KLHDC4-201ENST00000270583 PLEKHH2Q8IVE3 1493 aa29.61■■■□□ 2.33
KLHDC4-201ENST00000270583 DAPK1P53355 1430 aa29.6■■■□□ 2.33
KLHDC4-201ENST00000270583 SYCP2Q9BX26 1530 aa29.59■■■□□ 2.33
KLHDC4-201ENST00000270583 CFAP74Q9C0B2 1584 aa29.59■■■□□ 2.33
KLHDC4-201ENST00000270583 HNRNPMP52272 730 aaKnown RBP eCLIP29.58■■■□□ 2.338e-7■■■■□ 20.9
KLHDC4-201ENST00000270583 PTPRKQ15262 1439 aa29.58■■■□□ 2.33
KLHDC4-201ENST00000270583 ABCC5O15440 1437 aa29.57■■■□□ 2.32
KLHDC4-201ENST00000270583 ABCC1P33527 1531 aa29.57■■■□□ 2.32
KLHDC4-201ENST00000270583 TSPOAP1O95153 1857 aa29.57■■■□□ 2.32
KLHDC4-201ENST00000270583 KIAA1107Q9UPP5 1409 aa29.56■■■□□ 2.32
KLHDC4-201ENST00000270583 ARHGEF5Q12774 1597 aa29.56■■■□□ 2.32
KLHDC4-201ENST00000270583 CROCC2H7BZ55 1655 aa29.55■■■□□ 2.32
KLHDC4-201ENST00000270583 MBD5Q9P267 1494 aa29.55■■■□□ 2.32
KLHDC4-201ENST00000270583 AKNAQ7Z591 1439 aa29.52■■■□□ 2.32
KLHDC4-201ENST00000270583 CHIC2Q9UKJ5 165 aa29.52■■■□□ 2.32
KLHDC4-201ENST00000270583 ADGRL1O94910 1474 aa29.51■■■□□ 2.32
KLHDC4-201ENST00000270583 ARHGEF12Q9NZN5 1544 aa29.51■■■□□ 2.31
KLHDC4-201ENST00000270583 CCDC141Q6ZP82 1450 aa29.51■■■□□ 2.31
KLHDC4-201ENST00000270583 RSPH4AQ5TD94 716 aa29.5■■■□□ 2.31
KLHDC4-201ENST00000270583 NEO1Q92859 1461 aa29.49■■■□□ 2.31
KLHDC4-201ENST00000270583 PPRC1Q5VV67 1664 aaKnown RBP29.48■■■□□ 2.31
KLHDC4-201ENST00000270583 TSPY4P0CV99 314 aa29.46■■■□□ 2.31
KLHDC4-201ENST00000270583 TSPY10P0CW01 314 aa29.46■■■□□ 2.31
KLHDC4-201ENST00000270583 SCAPERQ9BY12 1400 aa29.46■■■□□ 2.31
KLHDC4-201ENST00000270583 ADGBQ8N7X0 1667 aa29.45■■■□□ 2.31
KLHDC4-201ENST00000270583 TRHP20396 242 aaPredicted RBP29.45■■■□□ 2.31
KLHDC4-201ENST00000270583 SHANK2Q9UPX8 1470 aa29.45■■■□□ 2.3
KLHDC4-201ENST00000270583 TEX14Q8IWB6 1497 aa29.44■■■□□ 2.3
KLHDC4-201ENST00000270583 C9orf84Q5VXU9 1444 aa29.43■■■□□ 2.3
KLHDC4-201ENST00000270583 TRAPPC8Q9Y2L5 1435 aa29.43■■■□□ 2.3
KLHDC4-201ENST00000270583 RRP7BPQ9NSQ0 103 aa29.4■■■□□ 2.3
KLHDC4-201ENST00000270583 ROCK1Q13464 1354 aa29.4■■■□□ 2.3
KLHDC4-201ENST00000270583 HFM1A2PYH4 1435 aa29.39■■■□□ 2.29
KLHDC4-201ENST00000270583 SETD5Q9C0A6 1442 aa29.39■■■□□ 2.29
KLHDC4-201ENST00000270583 MAST1Q9Y2H9 1570 aa29.37■■■□□ 2.29
KLHDC4-201ENST00000270583 ADGRL2O95490 1459 aa29.37■■■□□ 2.29
KLHDC4-201ENST00000270583 AFAP1Q8N556 730 aa29.37■■■□□ 2.29
KLHDC4-201ENST00000270583 GCC2Q8IWJ2 1684 aa29.36■■■□□ 2.29
KLHDC4-201ENST00000270583 ANKRD30AQ9BXX3 1397 aa29.36■■■□□ 2.29
KLHDC4-201ENST00000270583 NAIPQ13075 1403 aa29.35■■■□□ 2.29
KLHDC4-201ENST00000270583 NCOA1Q15788 1441 aa29.34■■■□□ 2.29
KLHDC4-201ENST00000270583 ZNF518AQ6AHZ1 1483 aa29.34■■■□□ 2.29
KLHDC4-201ENST00000270583 RAB3GAP2Q9H2M9 1393 aa29.32■■■□□ 2.28
KLHDC4-201ENST00000270583 POGZQ7Z3K3 1410 aa29.32■■■□□ 2.28
KLHDC4-201ENST00000270583 DENND4BO75064 1496 aaPredicted RBP29.32■■■□□ 2.28
KLHDC4-201ENST00000270583 SPAG9O60271 1321 aaKnown RBP29.31■■■□□ 2.28
KLHDC4-201ENST00000270583 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
KLHDC4-201ENST00000270583 PLXNC1O60486 1568 aa29.26■■■□□ 2.28
KLHDC4-201ENST00000270583 ZFYVE16Q7Z3T8 1539 aa29.26■■■□□ 2.27
KLHDC4-201ENST00000270583 MYT1LQ9UL68 1186 aa29.26■■■□□ 2.27
KLHDC4-201ENST00000270583 RTEL1-TNFRSF6BF6WH68 1400 aa29.26■■■□□ 2.27
KLHDC4-201ENST00000270583 KDM5CP41229 1560 aa29.26■■■□□ 2.27
KLHDC4-201ENST00000270583 INO80Q9ULG1 1556 aaPredicted RBP29.26■■■□□ 2.27
KLHDC4-201ENST00000270583 RAPGEF3O95398 923 aa29.25■■■□□ 2.27
KLHDC4-201ENST00000270583 ATP7AQ04656 1500 aa29.25■■■□□ 2.27
KLHDC4-201ENST00000270583 KIF15Q9NS87 1388 aa29.24■■■□□ 2.27
KLHDC4-201ENST00000270583 KDM6BO15054 1643 aa29.22■■■□□ 2.27
KLHDC4-201ENST00000270583 KIDINS220Q9ULH0 1771 aa29.2■■■□□ 2.27
KLHDC4-201ENST00000270583 HECW2Q9P2P5 1572 aa29.2■■■□□ 2.27
KLHDC4-201ENST00000270583 HRCP23327 699 aa29.2■■■□□ 2.26
KLHDC4-201ENST00000270583 FRMPD1Q5SYB0 1578 aa29.19■■■□□ 2.26
KLHDC4-201ENST00000270583 ANKRD50Q9ULJ7 1429 aa29.17■■■□□ 2.26
KLHDC4-201ENST00000270583 MLH3Q9UHC1 1453 aa29.17■■■□□ 2.26
KLHDC4-201ENST00000270583 DUOX2Q9NRD8 1548 aa29.15■■■□□ 2.26
KLHDC4-201ENST00000270583 COL17A1Q9UMD9 1497 aaPredicted RBP29.13■■■□□ 2.25
KLHDC4-201ENST00000270583 ZMYM4Q5VZL5 1548 aa29.11■■■□□ 2.25
KLHDC4-201ENST00000270583 CCER1Q8TC90 406 aaPredicted RBP29.1■■■□□ 2.25
KLHDC4-201ENST00000270583 ABCA6Q8N139 1617 aa29.08■■■□□ 2.25
KLHDC4-201ENST00000270583 ERBINQ96RT1 1412 aa29.07■■■□□ 2.24
KLHDC4-201ENST00000270583 TRIM52Q96A61 297 aa29.07■■■□□ 2.24
KLHDC4-201ENST00000270583 ACIN1Q9UKV3 1341 aaKnown RBP29.05■■■□□ 2.24
KLHDC4-201ENST00000270583 MAGI2Q86UL8 1455 aa29.04■■■□□ 2.24
KLHDC4-201ENST00000270583 DHX57Q6P158 1386 aaKnown RBP29.04■■■□□ 2.24
KLHDC4-201ENST00000270583 DIP2CQ9Y2E4 1556 aa29.03■■■□□ 2.24
KLHDC4-201ENST00000270583 DHX29Q7Z478 1369 aaKnown RBP29.02■■■□□ 2.24
KLHDC4-201ENST00000270583 YEATS2Q9ULM3 1422 aa29.02■■■□□ 2.24
KLHDC4-201ENST00000270583 A2MP01023 1474 aa29.01■■■□□ 2.24
KLHDC4-201ENST00000270583 EIF2AK4Q9P2K8 1649 aaKnown RBP28.97■■■□□ 2.23
KLHDC4-201ENST00000270583 UNC13BO14795 1591 aa28.94■■■□□ 2.22
KLHDC4-201ENST00000270583 NUP155O75694 1391 aa28.92■■■□□ 2.22
KLHDC4-201ENST00000270583 KIF3BO15066 747 aa28.92■■■□□ 2.22
KLHDC4-201ENST00000270583 ARHGEF40Q8TER5 1519 aa28.92■■■□□ 2.22
KLHDC4-201ENST00000270583 ATP10AO60312 1499 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms