RNA–Protein interactions for RNA: ENST00000264694.12

SNX25-201, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX25, Length 3,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-201ENST00000264694 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
SNX25-201ENST00000264694 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
SNX25-201ENST00000264694 SMG6Q86US8 1419 aaKnown RBP17.93■□□□□ 0.46
SNX25-201ENST00000264694 ZNF326Q5BKZ1 582 aaKnown RBP17.93■□□□□ 0.46
SNX25-201ENST00000264694 MAGI3Q5TCQ9 1506 aa17.92■□□□□ 0.46
SNX25-201ENST00000264694 EHBP1L1Q8N3D4 1523 aa17.91■□□□□ 0.46
SNX25-201ENST00000264694 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
SNX25-201ENST00000264694 TDRD9Q8NDG6 1382 aaKnown RBP17.91■□□□□ 0.46
SNX25-201ENST00000264694 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
SNX25-201ENST00000264694 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
SNX25-201ENST00000264694 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
SNX25-201ENST00000264694 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
SNX25-201ENST00000264694 CUL7Q14999 1698 aa17.88■□□□□ 0.45
SNX25-201ENST00000264694 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
SNX25-201ENST00000264694 ANKRD30BQ9BXX2 1392 aa17.87■□□□□ 0.45
SNX25-201ENST00000264694 SPATA31E1Q6ZUB1 1445 aa17.86■□□□□ 0.45
SNX25-201ENST00000264694 GCC2Q8IWJ2 1684 aa17.85■□□□□ 0.45
SNX25-201ENST00000264694 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
SNX25-201ENST00000264694 RTN4Q9NQC3 1192 aaKnown RBP17.85■□□□□ 0.45
SNX25-201ENST00000264694 SAMD9Q5K651 1589 aa17.84■□□□□ 0.45
SNX25-201ENST00000264694 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
SNX25-201ENST00000264694 SALL2Q9Y467 1007 aaPredicted RBP17.84■□□□□ 0.45
SNX25-201ENST00000264694 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
SNX25-201ENST00000264694 RPRD2Q5VT52 1461 aaKnown RBP17.84■□□□□ 0.45
SNX25-201ENST00000264694 IL27Q8NEV9 243 aa17.84■□□□□ 0.45
SNX25-201ENST00000264694 TCOF1Q13428 1488 aaKnown RBP17.83■□□□□ 0.45
SNX25-201ENST00000264694 TEX14Q8IWB6 1497 aa17.83■□□□□ 0.45
SNX25-201ENST00000264694 ARHGEF11O15085 1522 aa17.83■□□□□ 0.44
SNX25-201ENST00000264694 TMC1Q8TDI8 760 aa17.83■□□□□ 0.44
SNX25-201ENST00000264694 NESP48681 1621 aa17.82■□□□□ 0.44
SNX25-201ENST00000264694 ZNF644Q9H582 1327 aaPredicted RBP17.81■□□□□ 0.44
SNX25-201ENST00000264694 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
SNX25-201ENST00000264694 PNISRQ8TF01 805 aaKnown RBP17.8■□□□□ 0.44
SNX25-201ENST00000264694 CDK13Q14004 1512 aaKnown RBP17.79■□□□□ 0.44
SNX25-201ENST00000264694 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
SNX25-201ENST00000264694 USP47Q96K76 1375 aa17.78■□□□□ 0.44
SNX25-201ENST00000264694 NEFMP07197 916 aa17.76■□□□□ 0.43
SNX25-201ENST00000264694 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
SNX25-201ENST00000264694 RRP1P56182 461 aaKnown RBP17.74■□□□□ 0.43
SNX25-201ENST00000264694 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
SNX25-201ENST00000264694 ABCA5Q8WWZ7 1642 aa17.73■□□□□ 0.43
SNX25-201ENST00000264694 PDE4AP27815 886 aa17.73■□□□□ 0.43
SNX25-201ENST00000264694 DAPK1P53355 1430 aa17.73■□□□□ 0.43
SNX25-201ENST00000264694 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
SNX25-201ENST00000264694 SKAP1Q86WV1 359 aa17.72■□□□□ 0.43
SNX25-201ENST00000264694 BCORL1Q5H9F3 1711 aa17.71■□□□□ 0.43
SNX25-201ENST00000264694 ABCC5O15440 1437 aa17.7■□□□□ 0.42
SNX25-201ENST00000264694 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
SNX25-201ENST00000264694 RCAN3Q9UKA8 241 aa17.69■□□□□ 0.42
SNX25-201ENST00000264694 TCERG1O14776 1098 aaKnown RBP17.68■□□□□ 0.42
SNX25-201ENST00000264694 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
SNX25-201ENST00000264694 POLR1AO95602 1720 aaPredicted RBP17.68■□□□□ 0.42
SNX25-201ENST00000264694 PKD2Q13563 968 aa17.67■□□□□ 0.42
SNX25-201ENST00000264694 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
SNX25-201ENST00000264694 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
SNX25-201ENST00000264694 BACH2Q9BYV9 841 aa17.66■□□□□ 0.42
SNX25-201ENST00000264694 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
SNX25-201ENST00000264694 PLIN1O60240 522 aa17.66■□□□□ 0.42
SNX25-201ENST00000264694 LAMC3Q9Y6N6 1575 aa17.65■□□□□ 0.42
SNX25-201ENST00000264694 ZNF777Q9ULD5 760 aaPredicted RBP17.64■□□□□ 0.42
SNX25-201ENST00000264694 PZPP20742 1482 aa17.64■□□□□ 0.41
SNX25-201ENST00000264694 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
SNX25-201ENST00000264694 ST20-MTHFSA0A0A6YYL1 179 aa17.63■□□□□ 0.41
SNX25-201ENST00000264694 KIF15Q9NS87 1388 aa17.62■□□□□ 0.41
SNX25-201ENST00000264694 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
SNX25-201ENST00000264694 LRPPRCP42704 1394 aaKnown RBP17.61■□□□□ 0.41
SNX25-201ENST00000264694 MBD5Q9P267 1494 aa17.6■□□□□ 0.41
SNX25-201ENST00000264694 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
SNX25-201ENST00000264694 BRD4O60885 1362 aaPredicted RBP17.58■□□□□ 0.4
SNX25-201ENST00000264694 KIAA1107Q9UPP5 1409 aa17.58■□□□□ 0.4
SNX25-201ENST00000264694 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.4
SNX25-201ENST00000264694 ARID4BQ4LE39 1312 aaPredicted RBP17.58■□□□□ 0.4
SNX25-201ENST00000264694 KDM5CP41229 1560 aa17.58■□□□□ 0.4
SNX25-201ENST00000264694 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
SNX25-201ENST00000264694 WDR62O43379 1518 aa17.57■□□□□ 0.4
SNX25-201ENST00000264694 KIF21AQ7Z4S6 1674 aa17.57■□□□□ 0.4
SNX25-201ENST00000264694 PPM1GO15355 546 aaPredicted RBP17.57■□□□□ 0.4
SNX25-201ENST00000264694 USP35Q9P2H5 1018 aa17.57■□□□□ 0.4
SNX25-201ENST00000264694 BRPF3Q9ULD4 1205 aa17.57■□□□□ 0.4
SNX25-201ENST00000264694 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
SNX25-201ENST00000264694 MS4A1P11836 297 aa17.56■□□□□ 0.4
SNX25-201ENST00000264694 RALBP1Q15311 655 aa17.56■□□□□ 0.4
SNX25-201ENST00000264694 CRBNQ96SW2 442 aa17.56■□□□□ 0.4
SNX25-201ENST00000264694 IQGAP2Q13576 1575 aa17.54■□□□□ 0.4
SNX25-201ENST00000264694 DCAF11Q8TEB1 546 aa17.53■□□□□ 0.4
SNX25-201ENST00000264694 KIF14Q15058 1648 aa17.53■□□□□ 0.4
SNX25-201ENST00000264694 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.39
SNX25-201ENST00000264694 NLRP13Q86W25 1043 aa17.52■□□□□ 0.39
SNX25-201ENST00000264694 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
SNX25-201ENST00000264694 C20orf194Q5TEA3 1177 aa17.5■□□□□ 0.39
SNX25-201ENST00000264694 PRG4Q92954 1404 aaPredicted RBP17.49■□□□□ 0.39
SNX25-201ENST00000264694 RALGAPBQ86X10 1494 aa17.49■□□□□ 0.39
SNX25-201ENST00000264694 NFKBIBQ15653 356 aa17.49■□□□□ 0.39
SNX25-201ENST00000264694 NUP155O75694 1391 aa17.49■□□□□ 0.39
SNX25-201ENST00000264694 PDE3BQ13370 1112 aa17.48■□□□□ 0.39
SNX25-201ENST00000264694 CAMSAP2Q08AD1 1489 aa17.48■□□□□ 0.39
SNX25-201ENST00000264694 GSE1Q14687 1217 aa17.48■□□□□ 0.39
SNX25-201ENST00000264694 DDRGK1Q96HY6 314 aa17.48■□□□□ 0.39
SNX25-201ENST00000264694 KTN1Q86UP2 1357 aaKnown RBP17.48■□□□□ 0.39
SNX25-201ENST00000264694 NUP153P49790 1475 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms