RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 LRRC9Q6ZRR7 1453 aa19.32■□□□□ 0.68
CLNS1A-201ENST00000263309 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
CLNS1A-201ENST00000263309 RSPH4AQ5TD94 716 aa19.3■□□□□ 0.68
CLNS1A-201ENST00000263309 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
CLNS1A-201ENST00000263309 KANK4Q5T7N3 995 aaPredicted RBP19.29■□□□□ 0.68
CLNS1A-201ENST00000263309 SUPT6HQ7KZ85 1726 aaKnown RBP19.28■□□□□ 0.68
CLNS1A-201ENST00000263309 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.68
CLNS1A-201ENST00000263309 LRRIQ1Q96JM4 1722 aa19.27■□□□□ 0.68
CLNS1A-201ENST00000263309 MYO5CQ9NQX4 1742 aa19.25■□□□□ 0.67
CLNS1A-201ENST00000263309 DENND4BO75064 1496 aaPredicted RBP19.25■□□□□ 0.67
CLNS1A-201ENST00000263309 PLEKHH2Q8IVE3 1493 aa19.25■□□□□ 0.67
CLNS1A-201ENST00000263309 NCOA2Q15596 1464 aa19.24■□□□□ 0.67
CLNS1A-201ENST00000263309 SCAPERQ9BY12 1400 aa19.24■□□□□ 0.67
CLNS1A-201ENST00000263309 TTC37Q6PGP7 1564 aa19.23■□□□□ 0.67
CLNS1A-201ENST00000263309 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
CLNS1A-201ENST00000263309 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
CLNS1A-201ENST00000263309 HECW2Q9P2P5 1572 aa19.23■□□□□ 0.67
CLNS1A-201ENST00000263309 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
CLNS1A-201ENST00000263309 RAPGEF3O95398 923 aa19.21■□□□□ 0.67
CLNS1A-201ENST00000263309 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
CLNS1A-201ENST00000263309 MIA2Q96PC5 1412 aa19.17■□□□□ 0.66
CLNS1A-201ENST00000263309 HNRNPMP52272 730 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLNS1A-201ENST00000263309 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
CLNS1A-201ENST00000263309 MYOM3Q5VTT5 1437 aa19.15■□□□□ 0.66
CLNS1A-201ENST00000263309 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
CLNS1A-201ENST00000263309 PREX2Q70Z35 1606 aa19.14■□□□□ 0.66
CLNS1A-201ENST00000263309 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
CLNS1A-201ENST00000263309 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
CLNS1A-201ENST00000263309 ARID4BQ4LE39 1312 aaPredicted RBP19.14■□□□□ 0.65
CLNS1A-201ENST00000263309 FAM50AQ14320 339 aaKnown RBP19.13■□□□□ 0.65
CLNS1A-201ENST00000263309 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
CLNS1A-201ENST00000263309 MAGI2Q86UL8 1455 aa19.12■□□□□ 0.65
CLNS1A-201ENST00000263309 CDC42BPAQ5VT25 1732 aa19.09■□□□□ 0.65
CLNS1A-201ENST00000263309 POGZQ7Z3K3 1410 aa19.08■□□□□ 0.65
CLNS1A-201ENST00000263309 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.64
CLNS1A-201ENST00000263309 ESF1Q9H501 851 aaKnown RBP19.07■□□□□ 0.64
CLNS1A-201ENST00000263309 ZNF644Q9H582 1327 aaPredicted RBP19.06■□□□□ 0.64
CLNS1A-201ENST00000263309 CAMSAP2Q08AD1 1489 aa19.03■□□□□ 0.64
CLNS1A-201ENST00000263309 FGD6Q6ZV73 1430 aa19.03■□□□□ 0.64
CLNS1A-201ENST00000263309 ABCC1P33527 1531 aa19.03■□□□□ 0.64
CLNS1A-201ENST00000263309 TRAPPC8Q9Y2L5 1435 aa19■□□□□ 0.63
CLNS1A-201ENST00000263309 SYCP2Q9BX26 1530 aa19■□□□□ 0.63
CLNS1A-201ENST00000263309 CCDC141Q6ZP82 1450 aa19■□□□□ 0.63
CLNS1A-201ENST00000263309 MLH3Q9UHC1 1453 aa19■□□□□ 0.63
CLNS1A-201ENST00000263309 SAMD9LQ8IVG5 1584 aa19■□□□□ 0.63
CLNS1A-201ENST00000263309 ZFYVE16Q7Z3T8 1539 aa19■□□□□ 0.63
CLNS1A-201ENST00000263309 RTEL1-TNFRSF6BF6WH68 1400 aa19■□□□□ 0.63
CLNS1A-201ENST00000263309 ATP10AO60312 1499 aa18.99■□□□□ 0.63
CLNS1A-201ENST00000263309 ZMYM4Q5VZL5 1548 aa18.96■□□□□ 0.63
CLNS1A-201ENST00000263309 ITGAEP38570 1179 aa18.96■□□□□ 0.63
CLNS1A-201ENST00000263309 PTPRMP28827 1452 aa18.96■□□□□ 0.63
CLNS1A-201ENST00000263309 PTPN23Q9H3S7 1636 aa18.96■□□□□ 0.63
CLNS1A-201ENST00000263309 RICTORQ6R327 1708 aa18.95■□□□□ 0.62
CLNS1A-201ENST00000263309 ARHGEF12Q9NZN5 1544 aa18.95■□□□□ 0.62
CLNS1A-201ENST00000263309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLNS1A-201ENST00000263309 C9orf84Q5VXU9 1444 aa18.94■□□□□ 0.62
CLNS1A-201ENST00000263309 MBD5Q9P267 1494 aa18.94■□□□□ 0.62
CLNS1A-201ENST00000263309 ADAMTSL3P82987 1691 aa18.94■□□□□ 0.62
CLNS1A-201ENST00000263309 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
CLNS1A-201ENST00000263309 ARHGEF5Q12774 1597 aa18.93■□□□□ 0.62
CLNS1A-201ENST00000263309 CHIC2Q9UKJ5 165 aa18.92■□□□□ 0.62
CLNS1A-201ENST00000263309 KDM5CP41229 1560 aa18.92■□□□□ 0.62
CLNS1A-201ENST00000263309 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
CLNS1A-201ENST00000263309 MLECQ14165 292 aa18.91■□□□□ 0.62
CLNS1A-201ENST00000263309 FBXO41Q8TF61 875 aa18.91■□□□□ 0.62
CLNS1A-201ENST00000263309 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
CLNS1A-201ENST00000263309 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
CLNS1A-201ENST00000263309 RRP7BPQ9NSQ0 103 aa18.89■□□□□ 0.61
CLNS1A-201ENST00000263309 YEATS2Q9ULM3 1422 aa18.89■□□□□ 0.61
CLNS1A-201ENST00000263309 FRMPD1Q5SYB0 1578 aa18.89■□□□□ 0.61
CLNS1A-201ENST00000263309 DAPK1P53355 1430 aa18.88■□□□□ 0.61
CLNS1A-201ENST00000263309 DHX29Q7Z478 1369 aaKnown RBP18.87■□□□□ 0.61
CLNS1A-201ENST00000263309 ARHGEF40Q8TER5 1519 aa18.87■□□□□ 0.61
CLNS1A-201ENST00000263309 A2MP01023 1474 aa18.86■□□□□ 0.61
CLNS1A-201ENST00000263309 KIF3BO15066 747 aa18.86■□□□□ 0.61
CLNS1A-201ENST00000263309 GGT6Q6P531 493 aa18.86■□□□□ 0.61
CLNS1A-201ENST00000263309 ABCC5O15440 1437 aa18.85■□□□□ 0.61
CLNS1A-201ENST00000263309 SHANK2Q9UPX8 1470 aa18.84■□□□□ 0.61
CLNS1A-201ENST00000263309 ACIN1Q9UKV3 1341 aaKnown RBP18.84■□□□□ 0.61
CLNS1A-201ENST00000263309 BCORL1Q5H9F3 1711 aa18.83■□□□□ 0.61
CLNS1A-201ENST00000263309 LMTK3Q96Q04 1460 aa18.83■□□□□ 0.6
CLNS1A-201ENST00000263309 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.6
CLNS1A-201ENST00000263309 MADDQ8WXG6 1647 aa18.82■□□□□ 0.6
CLNS1A-201ENST00000263309 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
CLNS1A-201ENST00000263309 DNMT1P26358 1616 aaKnown RBP18.81■□□□□ 0.6
CLNS1A-201ENST00000263309 KANK1Q14678 1352 aa18.81■□□□□ 0.6
CLNS1A-201ENST00000263309 MAST1Q9Y2H9 1570 aa18.8■□□□□ 0.6
CLNS1A-201ENST00000263309 WASHC2CQ9Y4E1 1318 aa18.79■□□□□ 0.6
CLNS1A-201ENST00000263309 REREQ9P2R6 1566 aa18.79■□□□□ 0.6
CLNS1A-201ENST00000263309 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
CLNS1A-201ENST00000263309 KIDINS220Q9ULH0 1771 aa18.78■□□□□ 0.6
CLNS1A-201ENST00000263309 INO80Q9ULG1 1556 aaPredicted RBP18.78■□□□□ 0.6
CLNS1A-201ENST00000263309 DIP2CQ9Y2E4 1556 aa18.78■□□□□ 0.6
CLNS1A-201ENST00000263309 AGLP35573 1532 aa18.78■□□□□ 0.6
CLNS1A-201ENST00000263309 DUOX2Q9NRD8 1548 aa18.78■□□□□ 0.6
CLNS1A-201ENST00000263309 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
CLNS1A-201ENST00000263309 NCOA1Q15788 1441 aa18.76■□□□□ 0.59
CLNS1A-201ENST00000263309 CNTLNQ9NXG0 1405 aa18.75■□□□□ 0.59
CLNS1A-201ENST00000263309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.592e-7■■■□□ 16.1
CLNS1A-201ENST00000263309 ABCA6Q8N139 1617 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms