RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 ABCC5O15440 1437 aa23.42■■□□□ 1.34
PDE4C-201ENST00000262805 DNMT1P26358 1616 aaKnown RBP23.39■■□□□ 1.34
PDE4C-201ENST00000262805 RAPGEF6Q8TEU7 1601 aa23.38■■□□□ 1.33
PDE4C-201ENST00000262805 EIF4G2P78344 907 aaKnown RBP eCLIP23.37■■□□□ 1.33
PDE4C-201ENST00000262805 C11orf95C9JLR9 678 aaPredicted RBP23.37■■□□□ 1.33
PDE4C-201ENST00000262805 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
PDE4C-201ENST00000262805 ROCK1Q13464 1354 aa23.36■■□□□ 1.33
PDE4C-201ENST00000262805 ANKRD30BQ9BXX2 1392 aa23.36■■□□□ 1.33
PDE4C-201ENST00000262805 NEFLP07196 543 aa23.34■■□□□ 1.33
PDE4C-201ENST00000262805 NBPF8Q3BBV2 869 aa23.34■■□□□ 1.33
PDE4C-201ENST00000262805 MYT1Q01538 1121 aa23.34■■□□□ 1.33
PDE4C-201ENST00000262805 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
PDE4C-201ENST00000262805 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.32
PDE4C-201ENST00000262805 HNRNPUQ00839 825 aaKnown RBP eCLIP23.32■■□□□ 1.32
PDE4C-201ENST00000262805 RPRD2Q5VT52 1461 aaKnown RBP23.32■■□□□ 1.32
PDE4C-201ENST00000262805 TEX14Q8IWB6 1497 aa23.31■■□□□ 1.32
PDE4C-201ENST00000262805 CCDC184Q52MB2 194 aa23.31■■□□□ 1.32
PDE4C-201ENST00000262805 CNTLNQ9NXG0 1405 aa23.29■■□□□ 1.32
PDE4C-201ENST00000262805 SLC4A1APQ9BWU0 796 aaKnown RBP23.28■■□□□ 1.32
PDE4C-201ENST00000262805 PLB1Q6P1J6 1458 aa23.28■■□□□ 1.32
PDE4C-201ENST00000262805 NCOA1Q15788 1441 aa23.27■■□□□ 1.32
PDE4C-201ENST00000262805 CCDC7Q96M83 1385 aa23.26■■□□□ 1.31
PDE4C-201ENST00000262805 CAMSAP2Q08AD1 1489 aa23.25■■□□□ 1.31
PDE4C-201ENST00000262805 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
PDE4C-201ENST00000262805 CDK11AQ9UQ88 783 aaPredicted RBP23.25■■□□□ 1.31
PDE4C-201ENST00000262805 KIF14Q15058 1648 aa23.25■■□□□ 1.31
PDE4C-201ENST00000262805 TROQ12816 1431 aaPredicted RBP23.24■■□□□ 1.31
PDE4C-201ENST00000262805 PZPP20742 1482 aa23.24■■□□□ 1.31
PDE4C-201ENST00000262805 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
PDE4C-201ENST00000262805 CFDP1Q9UEE9 299 aaPredicted RBP23.22■■□□□ 1.31
PDE4C-201ENST00000262805 ZNF777Q9ULD5 760 aaPredicted RBP23.21■■□□□ 1.31
PDE4C-201ENST00000262805 GPATCH8Q9UKJ3 1502 aaKnown RBP23.21■■□□□ 1.31
PDE4C-201ENST00000262805 SPATA31E1Q6ZUB1 1445 aa23.19■■□□□ 1.3
PDE4C-201ENST00000262805 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
PDE4C-201ENST00000262805 IRX6P78412 446 aaPredicted RBP23.19■■□□□ 1.3
PDE4C-201ENST00000262805 FBLN2P98095 1184 aa23.19■■□□□ 1.3
PDE4C-201ENST00000262805 PRKRIP1Q9H875 184 aaPredicted RBP23.18■■□□□ 1.3
PDE4C-201ENST00000262805 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
PDE4C-201ENST00000262805 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
PDE4C-201ENST00000262805 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
PDE4C-201ENST00000262805 ADCY10Q96PN6 1610 aa23.14■■□□□ 1.29
PDE4C-201ENST00000262805 CROCC2H7BZ55 1655 aa23.14■■□□□ 1.29
PDE4C-201ENST00000262805 POLR1AO95602 1720 aaPredicted RBP23.12■■□□□ 1.29
PDE4C-201ENST00000262805 FAM9BQ8IZU0 186 aa23.12■■□□□ 1.29
PDE4C-201ENST00000262805 CHD1O14646 1710 aa23.1■■□□□ 1.29
PDE4C-201ENST00000262805 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
PDE4C-201ENST00000262805 ADGRL2O95490 1459 aa23.1■■□□□ 1.29
PDE4C-201ENST00000262805 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
PDE4C-201ENST00000262805 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
PDE4C-201ENST00000262805 MBD5Q9P267 1494 aa23.09■■□□□ 1.29
PDE4C-201ENST00000262805 KIAA1107Q9UPP5 1409 aa23.09■■□□□ 1.29
PDE4C-201ENST00000262805 PKD2Q13563 968 aa23.08■■□□□ 1.29
PDE4C-201ENST00000262805 ZNF326Q5BKZ1 582 aaKnown RBP23.07■■□□□ 1.28
PDE4C-201ENST00000262805 NUP160Q12769 1436 aa23.06■■□□□ 1.28
PDE4C-201ENST00000262805 CDC42BPAQ5VT25 1732 aa23.06■■□□□ 1.28
PDE4C-201ENST00000262805 CARMIL2Q6F5E8 1435 aa23.06■■□□□ 1.28
PDE4C-201ENST00000262805 BCORL1Q5H9F3 1711 aa23.05■■□□□ 1.28
PDE4C-201ENST00000262805 ANKRD30AQ9BXX3 1397 aa23.04■■□□□ 1.28
PDE4C-201ENST00000262805 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
PDE4C-201ENST00000262805 CNGB1Q14028 1251 aaPredicted RBP23.02■■□□□ 1.28
PDE4C-201ENST00000262805 USP47Q96K76 1375 aa23.01■■□□□ 1.27
PDE4C-201ENST00000262805 ABCA8O94911 1581 aa23.01■■□□□ 1.27
PDE4C-201ENST00000262805 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
PDE4C-201ENST00000262805 ANP32EQ9BTT0 268 aa23■■□□□ 1.27
PDE4C-201ENST00000262805 ATP10BO94823 1461 aa23■■□□□ 1.27
PDE4C-201ENST00000262805 DHX29Q7Z478 1369 aaKnown RBP22.99■■□□□ 1.27
PDE4C-201ENST00000262805 PLEKHD1A6NEE1 506 aa22.99■■□□□ 1.27
PDE4C-201ENST00000262805 POLR3GLQ9BT43 218 aa22.99■■□□□ 1.27
PDE4C-201ENST00000262805 C9orf84Q5VXU9 1444 aa22.97■■□□□ 1.27
PDE4C-201ENST00000262805 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
PDE4C-201ENST00000262805 KDM5CP41229 1560 aa22.97■■□□□ 1.27
PDE4C-201ENST00000262805 NUP155O75694 1391 aa22.96■■□□□ 1.27
PDE4C-201ENST00000262805 SHANK2Q9UPX8 1470 aa22.92■■□□□ 1.26
PDE4C-201ENST00000262805 HNRNPMP52272 730 aaKnown RBP eCLIP22.92■■□□□ 1.26
PDE4C-201ENST00000262805 UHRF1BP1Q6BDS2 1440 aa22.88■■□□□ 1.25
PDE4C-201ENST00000262805 RALGAPBQ86X10 1494 aa22.88■■□□□ 1.25
PDE4C-201ENST00000262805 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
PDE4C-201ENST00000262805 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
PDE4C-201ENST00000262805 KIF15Q9NS87 1388 aa22.87■■□□□ 1.25
PDE4C-201ENST00000262805 TSPY4P0CV99 314 aa22.86■■□□□ 1.25
PDE4C-201ENST00000262805 TSPY10P0CW01 314 aa22.86■■□□□ 1.25
PDE4C-201ENST00000262805 SENP3-EIF4A1A0A087X0R7 540 aa22.86■■□□□ 1.25
PDE4C-201ENST00000262805 KDM5DQ9BY66 1539 aa22.85■■□□□ 1.25
PDE4C-201ENST00000262805 PPP4R2Q9NY27 417 aa22.85■■□□□ 1.25
PDE4C-201ENST00000262805 CARD11Q9BXL7 1154 aa22.85■■□□□ 1.25
PDE4C-201ENST00000262805 CLASP1Q7Z460 1538 aa22.84■■□□□ 1.25
PDE4C-201ENST00000262805 ERICH6BQ5W0A0 696 aa22.83■■□□□ 1.24
PDE4C-201ENST00000262805 ARHGEF12Q9NZN5 1544 aa22.82■■□□□ 1.24
PDE4C-201ENST00000262805 B4GALNT3Q6L9W6 998 aa22.82■■□□□ 1.24
PDE4C-201ENST00000262805 PTPRGP23470 1445 aa22.82■■□□□ 1.24
PDE4C-201ENST00000262805 SAMD9LQ8IVG5 1584 aa22.82■■□□□ 1.24
PDE4C-201ENST00000262805 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
PDE4C-201ENST00000262805 MSH5O43196 834 aa22.81■■□□□ 1.24
PDE4C-201ENST00000262805 ARHGEF5Q12774 1597 aa22.81■■□□□ 1.24
PDE4C-201ENST00000262805 DCAF11Q8TEB1 546 aa22.81■■□□□ 1.24
PDE4C-201ENST00000262805 ST20-MTHFSA0A0A6YYL1 179 aa22.8■■□□□ 1.24
PDE4C-201ENST00000262805 ARID4BQ4LE39 1312 aaPredicted RBP22.78■■□□□ 1.24
PDE4C-201ENST00000262805 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
PDE4C-201ENST00000262805 PREX2Q70Z35 1606 aa22.76■■□□□ 1.23
PDE4C-201ENST00000262805 CCDC141Q6ZP82 1450 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms