RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 WDR62O43379 1518 aa17.74■□□□□ 0.43
SEC23B-201ENST00000262544 SUPT6HQ7KZ85 1726 aaKnown RBP17.73■□□□□ 0.43
SEC23B-201ENST00000262544 LRRIQ1Q96JM4 1722 aa17.72■□□□□ 0.43
SEC23B-201ENST00000262544 KIF7Q2M1P5 1343 aa17.71■□□□□ 0.43
SEC23B-201ENST00000262544 PKD2Q13563 968 aa17.71■□□□□ 0.43
SEC23B-201ENST00000262544 EPRSP07814 1512 aaKnown RBP17.7■□□□□ 0.42
SEC23B-201ENST00000262544 EHBP1L1Q8N3D4 1523 aa17.69■□□□□ 0.42
SEC23B-201ENST00000262544 MSH5O43196 834 aa17.69■□□□□ 0.42
SEC23B-201ENST00000262544 THOC2Q8NI27 1593 aaKnown RBP17.68■□□□□ 0.42
SEC23B-201ENST00000262544 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
SEC23B-201ENST00000262544 RGL3Q3MIN7 710 aa17.68■□□□□ 0.42
SEC23B-201ENST00000262544 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
SEC23B-201ENST00000262544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.429e-6■■■□□ 18.9
SEC23B-201ENST00000262544 UGGT2Q9NYU1 1516 aa17.66■□□□□ 0.42
SEC23B-201ENST00000262544 DENND4BO75064 1496 aaPredicted RBP17.65■□□□□ 0.42
SEC23B-201ENST00000262544 PRG4Q92954 1404 aaPredicted RBP17.65■□□□□ 0.42
SEC23B-201ENST00000262544 CNTLNQ9NXG0 1405 aa17.64■□□□□ 0.41
SEC23B-201ENST00000262544 TMC1Q8TDI8 760 aa17.63■□□□□ 0.41
SEC23B-201ENST00000262544 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
SEC23B-201ENST00000262544 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
SEC23B-201ENST00000262544 DCAF11Q8TEB1 546 aa17.61■□□□□ 0.41
SEC23B-201ENST00000262544 PPP4R2Q9NY27 417 aa17.61■□□□□ 0.41
SEC23B-201ENST00000262544 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
SEC23B-201ENST00000262544 KDM5BQ9UGL1 1544 aa17.6■□□□□ 0.41
SEC23B-201ENST00000262544 IFT140Q96RY7 1462 aa17.6■□□□□ 0.41
SEC23B-201ENST00000262544 HNRNPMP52272 730 aaKnown RBP eCLIP17.6■□□□□ 0.41
SEC23B-201ENST00000262544 DAPK1P53355 1430 aa17.6■□□□□ 0.41
SEC23B-201ENST00000262544 ANKRD30BQ9BXX2 1392 aa17.59■□□□□ 0.41
SEC23B-201ENST00000262544 IQGAP2Q13576 1575 aa17.59■□□□□ 0.41
SEC23B-201ENST00000262544 ABCC5O15440 1437 aa17.58■□□□□ 0.41
SEC23B-201ENST00000262544 NBR1Q14596 966 aa17.58■□□□□ 0.4
SEC23B-201ENST00000262544 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
SEC23B-201ENST00000262544 AKNAQ7Z591 1439 aa17.57■□□□□ 0.4
SEC23B-201ENST00000262544 HECW1Q76N89 1606 aa17.56■□□□□ 0.4
SEC23B-201ENST00000262544 NUP155O75694 1391 aa17.56■□□□□ 0.4
SEC23B-201ENST00000262544 ST20-MTHFSA0A0A6YYL1 179 aa17.56■□□□□ 0.4
SEC23B-201ENST00000262544 USP47Q96K76 1375 aa17.55■□□□□ 0.4
SEC23B-201ENST00000262544 PLEKHD1A6NEE1 506 aa17.55■□□□□ 0.4
SEC23B-201ENST00000262544 TSPY4P0CV99 314 aa17.55■□□□□ 0.4
SEC23B-201ENST00000262544 TSPY10P0CW01 314 aa17.55■□□□□ 0.4
SEC23B-201ENST00000262544 PLB1Q6P1J6 1458 aa17.54■□□□□ 0.4
SEC23B-201ENST00000262544 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
SEC23B-201ENST00000262544 NCOA1Q15788 1441 aa17.53■□□□□ 0.4
SEC23B-201ENST00000262544 JPH4Q96JJ6 628 aa17.52■□□□□ 0.4
SEC23B-201ENST00000262544 ADAMTS12P58397 1594 aa17.52■□□□□ 0.4
SEC23B-201ENST00000262544 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.4
SEC23B-201ENST00000262544 MIA2Q96PC5 1412 aa17.51■□□□□ 0.39
SEC23B-201ENST00000262544 CC2D1BQ5T0F9 858 aaKnown RBP17.49■□□□□ 0.39
SEC23B-201ENST00000262544 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
SEC23B-201ENST00000262544 RPRD2Q5VT52 1461 aaKnown RBP17.49■□□□□ 0.39
SEC23B-201ENST00000262544 NUP153P49790 1475 aaKnown RBP17.48■□□□□ 0.39
SEC23B-201ENST00000262544 TCOF1Q13428 1488 aaKnown RBP17.48■□□□□ 0.39
SEC23B-201ENST00000262544 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
SEC23B-201ENST00000262544 EIF4G3O43432 1585 aaKnown RBP17.44■□□□□ 0.38
SEC23B-201ENST00000262544 ANKRD30AQ9BXX3 1397 aa17.43■□□□□ 0.38
SEC23B-201ENST00000262544 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
SEC23B-201ENST00000262544 ANKRD50Q9ULJ7 1429 aa17.42■□□□□ 0.38
SEC23B-201ENST00000262544 MYT1LQ9UL68 1186 aa17.42■□□□□ 0.38
SEC23B-201ENST00000262544 NUDCQ9Y266 331 aa17.42■□□□□ 0.38
SEC23B-201ENST00000262544 CAMSAP2Q08AD1 1489 aa17.42■□□□□ 0.38
SEC23B-201ENST00000262544 TEX14Q8IWB6 1497 aa17.42■□□□□ 0.38
SEC23B-201ENST00000262544 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
SEC23B-201ENST00000262544 GCC2Q8IWJ2 1684 aa17.4■□□□□ 0.38
SEC23B-201ENST00000262544 PLIN1O60240 522 aa17.39■□□□□ 0.37
SEC23B-201ENST00000262544 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
SEC23B-201ENST00000262544 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.37
SEC23B-201ENST00000262544 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
SEC23B-201ENST00000262544 ROCK1Q13464 1354 aa17.39■□□□□ 0.37
SEC23B-201ENST00000262544 KIAA0586Q9BVV6 1533 aa17.38■□□□□ 0.37
SEC23B-201ENST00000262544 TROQ12816 1431 aaPredicted RBP17.38■□□□□ 0.37
SEC23B-201ENST00000262544 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
SEC23B-201ENST00000262544 PZPP20742 1482 aa17.38■□□□□ 0.37
SEC23B-201ENST00000262544 KIAA1107Q9UPP5 1409 aa17.37■□□□□ 0.37
SEC23B-201ENST00000262544 CDCA7LQ96GN5 454 aa17.37■□□□□ 0.37
SEC23B-201ENST00000262544 SPATA31E1Q6ZUB1 1445 aa17.37■□□□□ 0.37
SEC23B-201ENST00000262544 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
SEC23B-201ENST00000262544 GPATCH8Q9UKJ3 1502 aaKnown RBP17.36■□□□□ 0.37
SEC23B-201ENST00000262544 SENP3Q9H4L4 574 aaPredicted RBP17.36■□□□□ 0.37
SEC23B-201ENST00000262544 FANCIQ9NVI1 1328 aa17.36■□□□□ 0.37
SEC23B-201ENST00000262544 GRIN2AQ12879 1464 aa17.36■□□□□ 0.37
SEC23B-201ENST00000262544 EXOC6Q8TAG9 804 aa17.35■□□□□ 0.37
SEC23B-201ENST00000262544 DHX29Q7Z478 1369 aaKnown RBP17.35■□□□□ 0.37
SEC23B-201ENST00000262544 KIF14Q15058 1648 aa17.34■□□□□ 0.37
SEC23B-201ENST00000262544 KIAA0556O60303 1618 aa17.34■□□□□ 0.37
SEC23B-201ENST00000262544 KIF15Q9NS87 1388 aa17.33■□□□□ 0.37
SEC23B-201ENST00000262544 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
SEC23B-201ENST00000262544 ANP32AP39687 249 aaKnown RBP17.32■□□□□ 0.36
SEC23B-201ENST00000262544 DNMT1P26358 1616 aaKnown RBP17.31■□□□□ 0.36
SEC23B-201ENST00000262544 CARMIL2Q6F5E8 1435 aa17.31■□□□□ 0.36
SEC23B-201ENST00000262544 C9orf84Q5VXU9 1444 aa17.3■□□□□ 0.36
SEC23B-201ENST00000262544 NOP58Q9Y2X3 529 aaKnown RBP17.3■□□□□ 0.36
SEC23B-201ENST00000262544 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
SEC23B-201ENST00000262544 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
SEC23B-201ENST00000262544 PANK3Q9H999 370 aa17.27■□□□□ 0.36
SEC23B-201ENST00000262544 SYNJ2O15056 1496 aa17.27■□□□□ 0.35
SEC23B-201ENST00000262544 BCORL1Q5H9F3 1711 aa17.27■□□□□ 0.35
SEC23B-201ENST00000262544 MYBBP1AQ9BQG0 1328 aaKnown RBP17.26■□□□□ 0.35
SEC23B-201ENST00000262544 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
SEC23B-201ENST00000262544 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
SEC23B-201ENST00000262544 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms