RNA–Protein interactions for RNA: ENST00000262435.13

SMURF2-201, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF2, Length 2,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-201ENST00000262435 CCDC7Q96M83 1385 aa21.7■■□□□ 1.06
SMURF2-201ENST00000262435 KIF7Q2M1P5 1343 aa21.69■■□□□ 1.06
SMURF2-201ENST00000262435 ZNF608Q9ULD9 1512 aaPredicted RBP21.69■■□□□ 1.06
SMURF2-201ENST00000262435 MSH5O43196 834 aa21.68■■□□□ 1.06
SMURF2-201ENST00000262435 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
SMURF2-201ENST00000262435 CFDP1Q9UEE9 299 aaPredicted RBP21.68■■□□□ 1.06
SMURF2-201ENST00000262435 CDK11AQ9UQ88 783 aaPredicted RBP21.67■■□□□ 1.06
SMURF2-201ENST00000262435 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
SMURF2-201ENST00000262435 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
SMURF2-201ENST00000262435 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
SMURF2-201ENST00000262435 TARBP1Q13395 1621 aaKnown RBP21.65■■□□□ 1.06
SMURF2-201ENST00000262435 TCOF1Q13428 1488 aaKnown RBP21.65■■□□□ 1.06
SMURF2-201ENST00000262435 HECW1Q76N89 1606 aa21.64■■□□□ 1.06
SMURF2-201ENST00000262435 ABCC5O15440 1437 aa21.64■■□□□ 1.06
SMURF2-201ENST00000262435 DAPK1P53355 1430 aa21.64■■□□□ 1.05
SMURF2-201ENST00000262435 KDM2AQ9Y2K7 1162 aa21.64■■□□□ 1.05
SMURF2-201ENST00000262435 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
SMURF2-201ENST00000262435 PKD2Q13563 968 aa21.62■■□□□ 1.05
SMURF2-201ENST00000262435 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
SMURF2-201ENST00000262435 NCOA1Q15788 1441 aa21.59■■□□□ 1.05
SMURF2-201ENST00000262435 CHMP7Q8WUX9 453 aaPredicted RBP21.58■■□□□ 1.05
SMURF2-201ENST00000262435 WDR62O43379 1518 aa21.57■■□□□ 1.04
SMURF2-201ENST00000262435 RPRD2Q5VT52 1461 aaKnown RBP21.55■■□□□ 1.04
SMURF2-201ENST00000262435 PPP4R2Q9NY27 417 aa21.54■■□□□ 1.04
SMURF2-201ENST00000262435 SALL2Q9Y467 1007 aaPredicted RBP21.54■■□□□ 1.04
SMURF2-201ENST00000262435 NUP153P49790 1475 aaKnown RBP21.54■■□□□ 1.04
SMURF2-201ENST00000262435 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
SMURF2-201ENST00000262435 PBRM1Q86U86 1689 aa21.52■■□□□ 1.04
SMURF2-201ENST00000262435 ADAMTS12P58397 1594 aa21.52■■□□□ 1.04
SMURF2-201ENST00000262435 PLB1Q6P1J6 1458 aa21.51■■□□□ 1.03
SMURF2-201ENST00000262435 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
SMURF2-201ENST00000262435 TEX14Q8IWB6 1497 aa21.5■■□□□ 1.03
SMURF2-201ENST00000262435 AKNAQ7Z591 1439 aa21.5■■□□□ 1.03
SMURF2-201ENST00000262435 ERICH6Q7L0X2 663 aa21.49■■□□□ 1.03
SMURF2-201ENST00000262435 ZBED9Q6R2W3 1325 aa21.49■■□□□ 1.03
SMURF2-201ENST00000262435 USP47Q96K76 1375 aa21.47■■□□□ 1.03
SMURF2-201ENST00000262435 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
SMURF2-201ENST00000262435 ROCK1Q13464 1354 aa21.46■■□□□ 1.03
SMURF2-201ENST00000262435 SPATA31E1Q6ZUB1 1445 aa21.46■■□□□ 1.03
SMURF2-201ENST00000262435 CARD11Q9BXL7 1154 aa21.46■■□□□ 1.03
SMURF2-201ENST00000262435 HNRNPMP52272 730 aaKnown RBP eCLIP21.45■■□□□ 1.027e-8■■■■■ 30.6
SMURF2-201ENST00000262435 DCAF11Q8TEB1 546 aa21.44■■□□□ 1.02
SMURF2-201ENST00000262435 NUP155O75694 1391 aa21.44■■□□□ 1.02
SMURF2-201ENST00000262435 KIAA0586Q9BVV6 1533 aa21.43■■□□□ 1.02
SMURF2-201ENST00000262435 PZPP20742 1482 aa21.43■■□□□ 1.02
SMURF2-201ENST00000262435 RGL3Q3MIN7 710 aa21.43■■□□□ 1.02
SMURF2-201ENST00000262435 TMC1Q8TDI8 760 aa21.43■■□□□ 1.02
SMURF2-201ENST00000262435 JPH4Q96JJ6 628 aa21.43■■□□□ 1.02
SMURF2-201ENST00000262435 ST20-MTHFSA0A0A6YYL1 179 aa21.42■■□□□ 1.02
SMURF2-201ENST00000262435 CAMSAP2Q08AD1 1489 aa21.42■■□□□ 1.02
SMURF2-201ENST00000262435 PLEKHD1A6NEE1 506 aa21.4■■□□□ 1.02
SMURF2-201ENST00000262435 KIAA0556O60303 1618 aa21.4■■□□□ 1.02
SMURF2-201ENST00000262435 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.01
SMURF2-201ENST00000262435 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.01
SMURF2-201ENST00000262435 TROQ12816 1431 aaPredicted RBP21.38■■□□□ 1.01
SMURF2-201ENST00000262435 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
SMURF2-201ENST00000262435 DHX29Q7Z478 1369 aaKnown RBP21.38■■□□□ 1.01
SMURF2-201ENST00000262435 GRIN2AQ12879 1464 aa21.37■■□□□ 1.01
SMURF2-201ENST00000262435 TSPY4P0CV99 314 aa21.36■■□□□ 1.01
SMURF2-201ENST00000262435 TSPY10P0CW01 314 aa21.36■■□□□ 1.01
SMURF2-201ENST00000262435 KIAA1107Q9UPP5 1409 aa21.36■■□□□ 1.01
SMURF2-201ENST00000262435 ANKRD50Q9ULJ7 1429 aa21.35■■□□□ 1.01
SMURF2-201ENST00000262435 RAPGEF6Q8TEU7 1601 aa21.35■■□□□ 1.01
SMURF2-201ENST00000262435 CCDC136Q96JN2 1154 aa21.35■■□□□ 1.01
SMURF2-201ENST00000262435 ANKRD30AQ9BXX3 1397 aa21.35■■□□□ 1.01
SMURF2-201ENST00000262435 KIF14Q15058 1648 aa21.35■■□□□ 1.01
SMURF2-201ENST00000262435 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
SMURF2-201ENST00000262435 FANCIQ9NVI1 1328 aa21.33■■□□□ 1.01
SMURF2-201ENST00000262435 PNISRQ8TF01 805 aaKnown RBP21.32■■□□□ 1
SMURF2-201ENST00000262435 NUDCQ9Y266 331 aa21.32■■□□□ 1
SMURF2-201ENST00000262435 BCL11AQ9H165 835 aa21.31■■□□□ 1
SMURF2-201ENST00000262435 BCORL1Q5H9F3 1711 aa21.3■■□□□ 1
SMURF2-201ENST00000262435 ERCC6Q03468 1493 aa21.29■■□□□ 1
SMURF2-201ENST00000262435 ERICH6BQ5W0A0 696 aa21.28■■□□□ 1
SMURF2-201ENST00000262435 NBPF1Q3BBV0 1214 aa21.28■■□□□ 1
SMURF2-201ENST00000262435 NBR1Q14596 966 aa21.27■■□□□ 1
SMURF2-201ENST00000262435 PAK3O75914 559 aaPredicted RBP21.24■□□□□ 0.99
SMURF2-201ENST00000262435 CC2D1BQ5T0F9 858 aaKnown RBP21.24■□□□□ 0.99
SMURF2-201ENST00000262435 EIF4G3O43432 1585 aaKnown RBP21.24■□□□□ 0.99
SMURF2-201ENST00000262435 C9orf84Q5VXU9 1444 aa21.23■□□□□ 0.99
SMURF2-201ENST00000262435 ROCK2O75116 1388 aaKnown RBP21.22■□□□□ 0.99
SMURF2-201ENST00000262435 KIF15Q9NS87 1388 aa21.22■□□□□ 0.99
SMURF2-201ENST00000262435 CEP170Q5SW79 1584 aa21.21■□□□□ 0.99
SMURF2-201ENST00000262435 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
SMURF2-201ENST00000262435 SMG6Q86US8 1419 aaKnown RBP21.21■□□□□ 0.99
SMURF2-201ENST00000262435 MBD5Q9P267 1494 aa21.2■□□□□ 0.98
SMURF2-201ENST00000262435 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
SMURF2-201ENST00000262435 CDCA7LQ96GN5 454 aa21.18■□□□□ 0.98
SMURF2-201ENST00000262435 EXOC6Q8TAG9 804 aa21.17■□□□□ 0.98
SMURF2-201ENST00000262435 ATP10BO94823 1461 aa21.17■□□□□ 0.98
SMURF2-201ENST00000262435 PLIN1O60240 522 aa21.15■□□□□ 0.98
SMURF2-201ENST00000262435 SKAP1Q86WV1 359 aa21.15■□□□□ 0.98
SMURF2-201ENST00000262435 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
SMURF2-201ENST00000262435 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
SMURF2-201ENST00000262435 MYBBP1AQ9BQG0 1328 aaKnown RBP21.13■□□□□ 0.97
SMURF2-201ENST00000262435 KDM5CP41229 1560 aa21.13■□□□□ 0.97
SMURF2-201ENST00000262435 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
SMURF2-201ENST00000262435 NOP58Q9Y2X3 529 aaKnown RBP21.11■□□□□ 0.97
SMURF2-201ENST00000262435 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.97
SMURF2-201ENST00000262435 RALGAPBQ86X10 1494 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms