RNA–Protein interactions for RNA: ENST00000261890.6

RAB11A-201, Transcript of RAB11A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-201ENST00000261890 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
RAB11A-201ENST00000261890 RAB3GAP2Q9H2M9 1393 aa10.26□□□□□ -0.77
RAB11A-201ENST00000261890 CUX1P39880 1505 aa10.26□□□□□ -0.77
RAB11A-201ENST00000261890 PPM1GO15355 546 aaPredicted RBP10.26□□□□□ -0.77
RAB11A-201ENST00000261890 BCL11AQ9H165 835 aa10.26□□□□□ -0.77
RAB11A-201ENST00000261890 SALL2Q9Y467 1007 aaPredicted RBP10.26□□□□□ -0.77
RAB11A-201ENST00000261890 HIRIP3Q9BW71 556 aaPredicted RBP10.25□□□□□ -0.77
RAB11A-201ENST00000261890 UPF2Q9HAU5 1272 aaKnown RBP10.25□□□□□ -0.77
RAB11A-201ENST00000261890 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
RAB11A-201ENST00000261890 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
RAB11A-201ENST00000261890 EFCAB5A4FU69 1503 aa10.24□□□□□ -0.77
RAB11A-201ENST00000261890 CASKIN1Q8WXD9 1431 aa10.24□□□□□ -0.77
RAB11A-201ENST00000261890 MYT1Q01538 1121 aa10.24□□□□□ -0.77
RAB11A-201ENST00000261890 STAC3Q96MF2 364 aa10.24□□□□□ -0.77
RAB11A-201ENST00000261890 GTF3C3Q9Y5Q9 886 aa10.23□□□□□ -0.77
RAB11A-201ENST00000261890 KIF21BO75037 1637 aa10.23□□□□□ -0.77
RAB11A-201ENST00000261890 SNAPC4Q5SXM2 1469 aa10.23□□□□□ -0.77
RAB11A-201ENST00000261890 VGFO15240 615 aaPredicted RBP10.23□□□□□ -0.77
RAB11A-201ENST00000261890 ROCK2O75116 1388 aaKnown RBP10.22□□□□□ -0.77
RAB11A-201ENST00000261890 CHMP4BQ9H444 224 aaKnown RBP10.22□□□□□ -0.77
RAB11A-201ENST00000261890 STK26Q9P289 416 aa10.22□□□□□ -0.77
RAB11A-201ENST00000261890 DNAJC5BQ9UF47 199 aa10.22□□□□□ -0.77
RAB11A-201ENST00000261890 ABCA10Q8WWZ4 1543 aa10.21□□□□□ -0.77
RAB11A-201ENST00000261890 SYNJ1O43426 1573 aa10.21□□□□□ -0.78
RAB11A-201ENST00000261890 CCDC144AA2RUR9 1427 aa10.2□□□□□ -0.78
RAB11A-201ENST00000261890 MORC1Q86VD1 984 aa10.2□□□□□ -0.78
RAB11A-201ENST00000261890 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.2□□□□□ -0.78
RAB11A-201ENST00000261890 TERF2IPQ9NYB0 399 aa10.2□□□□□ -0.78
RAB11A-201ENST00000261890 PLEKHH2Q8IVE3 1493 aa10.2□□□□□ -0.78
RAB11A-201ENST00000261890 KIAA0586Q9BVV6 1533 aa10.2□□□□□ -0.78
RAB11A-201ENST00000261890 FYCO1Q9BQS8 1478 aa10.19□□□□□ -0.78
RAB11A-201ENST00000261890 MS4A1P11836 297 aa10.19□□□□□ -0.78
RAB11A-201ENST00000261890 ANP32AP39687 249 aaKnown RBP10.19□□□□□ -0.78
RAB11A-201ENST00000261890 EIF5BO60841 1220 aaKnown RBP10.19□□□□□ -0.78
RAB11A-201ENST00000261890 CHMP4AQ9BY43 222 aa10.19□□□□□ -0.78
RAB11A-201ENST00000261890 MAGI1Q96QZ7 1491 aaPredicted RBP10.19□□□□□ -0.78
RAB11A-201ENST00000261890 PRXQ9BXM0 1461 aa10.18□□□□□ -0.78
RAB11A-201ENST00000261890 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
RAB11A-201ENST00000261890 PRDM2Q13029 1718 aa10.18□□□□□ -0.78
RAB11A-201ENST00000261890 SAFB2Q14151 953 aaKnown RBP eCLIP10.17□□□□□ -0.78
RAB11A-201ENST00000261890 U2SURPO15042 1029 aaKnown RBP10.16□□□□□ -0.78
RAB11A-201ENST00000261890 FKBP8Q14318 412 aa10.16□□□□□ -0.78
RAB11A-201ENST00000261890 FOXD1Q16676 465 aa10.16□□□□□ -0.78
RAB11A-201ENST00000261890 HSPA5P11021 654 aaKnown RBP10.16□□□□□ -0.78
RAB11A-201ENST00000261890 FGD6Q6ZV73 1430 aa10.15□□□□□ -0.78
RAB11A-201ENST00000261890 MIER1Q8N108 512 aa10.15□□□□□ -0.78
RAB11A-201ENST00000261890 KTN1Q86UP2 1357 aaKnown RBP10.15□□□□□ -0.78
RAB11A-201ENST00000261890 CC2D1BQ5T0F9 858 aaKnown RBP10.15□□□□□ -0.78
RAB11A-201ENST00000261890 CALD1Q05682 793 aaKnown RBP10.15□□□□□ -0.79
RAB11A-201ENST00000261890 KIF15Q9NS87 1388 aa10.14□□□□□ -0.79
RAB11A-201ENST00000261890 LRRC9Q6ZRR7 1453 aa10.14□□□□□ -0.79
RAB11A-201ENST00000261890 ARHGAP5Q13017 1502 aa10.14□□□□□ -0.79
RAB11A-201ENST00000261890 RALBP1Q15311 655 aa10.14□□□□□ -0.79
RAB11A-201ENST00000261890 HSP90AA1P07900 732 aaKnown RBP10.13□□□□□ -0.79
RAB11A-201ENST00000261890 PAK3O75914 559 aaPredicted RBP10.13□□□□□ -0.79
RAB11A-201ENST00000261890 TNNT2P45379 298 aaPredicted RBP10.13□□□□□ -0.79
RAB11A-201ENST00000261890 L3MBTL2Q969R5 705 aa10.13□□□□□ -0.79
RAB11A-201ENST00000261890 AEBP2Q6ZN18 517 aaPredicted RBP10.13□□□□□ -0.79
RAB11A-201ENST00000261890 NGDNQ8NEJ9 315 aaKnown RBP10.12□□□□□ -0.79
RAB11A-201ENST00000261890 RTF1Q92541 710 aaKnown RBP10.12□□□□□ -0.79
RAB11A-201ENST00000261890 CUL7Q14999 1698 aa10.12□□□□□ -0.79
RAB11A-201ENST00000261890 TROQ12816 1431 aaPredicted RBP10.12□□□□□ -0.79
RAB11A-201ENST00000261890 ARXQ96QS3 562 aa10.12□□□□□ -0.79
RAB11A-201ENST00000261890 NCOA2Q15596 1464 aa10.11□□□□□ -0.79
RAB11A-201ENST00000261890 FTSJ3Q8IY81 847 aaKnown RBP10.11□□□□□ -0.79
RAB11A-201ENST00000261890 CCER2I3L3R5 266 aa10.11□□□□□ -0.79
RAB11A-201ENST00000261890 MIA2Q96PC5 1412 aa10.11□□□□□ -0.79
RAB11A-201ENST00000261890 HECW1Q76N89 1606 aa10.11□□□□□ -0.79
RAB11A-201ENST00000261890 CSB-PGBD3P0DP91 1061 aa10.11□□□□□ -0.79
RAB11A-201ENST00000261890 LAS1LQ9Y4W2 734 aaKnown RBP10.1□□□□□ -0.79
RAB11A-201ENST00000261890 POGZQ7Z3K3 1410 aa10.1□□□□□ -0.79
RAB11A-201ENST00000261890 UNC13AQ9UPW8 1703 aa10.1□□□□□ -0.79
RAB11A-201ENST00000261890 EHBP1L1Q8N3D4 1523 aa10.1□□□□□ -0.79
RAB11A-201ENST00000261890 ANKRD50Q9ULJ7 1429 aa10.09□□□□□ -0.79
RAB11A-201ENST00000261890 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
RAB11A-201ENST00000261890 NPHP1O15259 732 aa10.09□□□□□ -0.79
RAB11A-201ENST00000261890 EVC2Q86UK5 1308 aa10.09□□□□□ -0.79
RAB11A-201ENST00000261890 GRIN2AQ12879 1464 aa10.09□□□□□ -0.79
RAB11A-201ENST00000261890 IQGAP2Q13576 1575 aa10.08□□□□□ -0.8
RAB11A-201ENST00000261890 SOX12O15370 315 aa10.07□□□□□ -0.8
RAB11A-201ENST00000261890 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
RAB11A-201ENST00000261890 TRAK1Q9UPV9 953 aa10.06□□□□□ -0.8
RAB11A-201ENST00000261890 CASC1Q6TDU7 716 aa10.05□□□□□ -0.8
RAB11A-201ENST00000261890 AFAP1Q8N556 730 aa10.05□□□□□ -0.8
RAB11A-201ENST00000261890 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
RAB11A-201ENST00000261890 ZNF644Q9H582 1327 aaPredicted RBP10.05□□□□□ -0.8
RAB11A-201ENST00000261890 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
RAB11A-201ENST00000261890 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
RAB11A-201ENST00000261890 NUTM2DQ5VT03 806 aaPredicted RBP10.05□□□□□ -0.8
RAB11A-201ENST00000261890 PHLDB1Q86UU1 1377 aa10.04□□□□□ -0.8
RAB11A-201ENST00000261890 U2AF1L5P0DN76 240 aaPredicted RBP10.04□□□□□ -0.8
RAB11A-201ENST00000261890 U2AF1Q01081 240 aaKnown RBP eCLIP10.04□□□□□ -0.8
RAB11A-201ENST00000261890 AMPHP49418 695 aa10.03□□□□□ -0.8
RAB11A-201ENST00000261890 HDAC5Q9UQL6 1122 aa10.03□□□□□ -0.8
RAB11A-201ENST00000261890 THEMISQ8N1K5 641 aaPredicted RBP10.03□□□□□ -0.8
RAB11A-201ENST00000261890 IPO8O15397 1037 aaKnown RBP10.03□□□□□ -0.8
RAB11A-201ENST00000261890 HFM1A2PYH4 1435 aa10.03□□□□□ -0.8
RAB11A-201ENST00000261890 SLC52A1Q9NWF4 448 aa10.03□□□□□ -0.8
RAB11A-201ENST00000261890 CCDC9Q9Y3X0 531 aaKnown RBP10.02□□□□□ -0.81
RAB11A-201ENST00000261890 RRBP1Q9P2E9 1410 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms