RNA–Protein interactions for RNA: ENST00000261890.6

RAB11A-201, Transcript of RAB11A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-201ENST00000261890 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
RAB11A-201ENST00000261890 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
RAB11A-201ENST00000261890 SUPT5HO00267 1087 aaKnown RBP12.98□□□□□ -0.33
RAB11A-201ENST00000261890 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
RAB11A-201ENST00000261890 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
RAB11A-201ENST00000261890 APLP2Q06481 763 aa12.39□□□□□ -0.43
RAB11A-201ENST00000261890 ABCC9O60706 1549 aa12.29□□□□□ -0.44
RAB11A-201ENST00000261890 TRIM41Q8WV44 630 aa12.22□□□□□ -0.45
RAB11A-201ENST00000261890 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
RAB11A-201ENST00000261890 UBTFP17480 764 aaKnown RBP12.01□□□□□ -0.49
RAB11A-201ENST00000261890 CCDC180Q9P1Z9 1646 aa12.01□□□□□ -0.49
RAB11A-201ENST00000261890 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAB11A-201ENST00000261890 ATP1B4Q9UN42 357 aaPredicted RBP11.94□□□□□ -0.5
RAB11A-201ENST00000261890 RANGAP1P46060 587 aaPredicted RBP11.92□□□□□ -0.5
RAB11A-201ENST00000261890 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
RAB11A-201ENST00000261890 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
RAB11A-201ENST00000261890 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
RAB11A-201ENST00000261890 SCRIBQ14160 1630 aa11.71□□□□□ -0.54
RAB11A-201ENST00000261890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
RAB11A-201ENST00000261890 ZEB1P37275 1124 aaPredicted RBP11.7□□□□□ -0.54
RAB11A-201ENST00000261890 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
RAB11A-201ENST00000261890 NACADO15069 1562 aa11.67□□□□□ -0.54
RAB11A-201ENST00000261890 CHIC1Q5VXU3 224 aa11.66□□□□□ -0.54
RAB11A-201ENST00000261890 PCGF6Q9BYE7 350 aa11.64□□□□□ -0.55
RAB11A-201ENST00000261890 CCER1Q8TC90 406 aaPredicted RBP11.61□□□□□ -0.55
RAB11A-201ENST00000261890 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
RAB11A-201ENST00000261890 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
RAB11A-201ENST00000261890 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
RAB11A-201ENST00000261890 FBLN2P98095 1184 aa11.48□□□□□ -0.57
RAB11A-201ENST00000261890 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
RAB11A-201ENST00000261890 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
RAB11A-201ENST00000261890 ITGAEP38570 1179 aa11.39□□□□□ -0.59
RAB11A-201ENST00000261890 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
RAB11A-201ENST00000261890 PPARGC1BQ86YN6 1023 aaKnown RBP11.37□□□□□ -0.59
RAB11A-201ENST00000261890 CDK11AQ9UQ88 783 aaPredicted RBP11.34□□□□□ -0.59
RAB11A-201ENST00000261890 BAZ1BQ9UIG0 1483 aaKnown RBP11.3□□□□□ -0.6
RAB11A-201ENST00000261890 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
RAB11A-201ENST00000261890 CENPBP07199 599 aaPredicted RBP11.29□□□□□ -0.6
RAB11A-201ENST00000261890 MYO15BQ96JP2 1530 aa11.29□□□□□ -0.6
RAB11A-201ENST00000261890 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAB11A-201ENST00000261890 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.61
RAB11A-201ENST00000261890 RSF1Q96T23 1441 aaPredicted RBP11.25□□□□□ -0.61
RAB11A-201ENST00000261890 TRIM52Q96A61 297 aa11.21□□□□□ -0.61
RAB11A-201ENST00000261890 CHMP7Q8WUX9 453 aaPredicted RBP11.21□□□□□ -0.61
RAB11A-201ENST00000261890 P3H3Q8IVL6 736 aa11.18□□□□□ -0.62
RAB11A-201ENST00000261890 EEA1Q15075 1411 aa11.16□□□□□ -0.62
RAB11A-201ENST00000261890 ERCC6Q03468 1493 aa11.15□□□□□ -0.62
RAB11A-201ENST00000261890 NEFLP07196 543 aa11.14□□□□□ -0.63
RAB11A-201ENST00000261890 POLR3GLQ9BT43 218 aa11.12□□□□□ -0.63
RAB11A-201ENST00000261890 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
RAB11A-201ENST00000261890 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
RAB11A-201ENST00000261890 WRNQ14191 1432 aaPredicted RBP eCLIP11.1□□□□□ -0.63
RAB11A-201ENST00000261890 ZNF777Q9ULD5 760 aaPredicted RBP11.08□□□□□ -0.64
RAB11A-201ENST00000261890 KIF27Q86VH2 1401 aa11.07□□□□□ -0.64
RAB11A-201ENST00000261890 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
RAB11A-201ENST00000261890 SLC4A1APQ9BWU0 796 aaKnown RBP11.05□□□□□ -0.64
RAB11A-201ENST00000261890 PDS5BQ9NTI5 1447 aa11.05□□□□□ -0.64
RAB11A-201ENST00000261890 CECR2Q9BXF3 1484 aa11.04□□□□□ -0.64
RAB11A-201ENST00000261890 ACIN1Q9UKV3 1341 aaKnown RBP11.01□□□□□ -0.65
RAB11A-201ENST00000261890 HRCP23327 699 aa11□□□□□ -0.65
RAB11A-201ENST00000261890 NEUROD1Q13562 356 aa10.98□□□□□ -0.65
RAB11A-201ENST00000261890 TSPY4P0CV99 314 aa10.98□□□□□ -0.65
RAB11A-201ENST00000261890 TSPY10P0CW01 314 aa10.98□□□□□ -0.65
RAB11A-201ENST00000261890 MTUS2Q5JR59 1369 aa10.98□□□□□ -0.65
RAB11A-201ENST00000261890 GOLGA3Q08378 1498 aa10.98□□□□□ -0.65
RAB11A-201ENST00000261890 BCANQ96GW7 911 aa10.97□□□□□ -0.65
RAB11A-201ENST00000261890 PLEKHD1A6NEE1 506 aa10.97□□□□□ -0.65
RAB11A-201ENST00000261890 CLIP1P30622 1438 aa10.96□□□□□ -0.66
RAB11A-201ENST00000261890 MROH2BQ7Z745 1585 aa10.93□□□□□ -0.66
RAB11A-201ENST00000261890 STAG3Q9UJ98 1225 aa10.93□□□□□ -0.66
RAB11A-201ENST00000261890 CEP164Q9UPV0 1460 aa10.93□□□□□ -0.66
RAB11A-201ENST00000261890 ZNF326Q5BKZ1 582 aaKnown RBP10.93□□□□□ -0.66
RAB11A-201ENST00000261890 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
RAB11A-201ENST00000261890 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.66
RAB11A-201ENST00000261890 ERICH6Q7L0X2 663 aa10.89□□□□□ -0.67
RAB11A-201ENST00000261890 CCDC88BA6NC98 1476 aa10.88□□□□□ -0.67
RAB11A-201ENST00000261890 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
RAB11A-201ENST00000261890 ATAD2BQ9ULI0 1458 aa10.87□□□□□ -0.67
RAB11A-201ENST00000261890 TNIKQ9UKE5 1360 aa10.86□□□□□ -0.67
RAB11A-201ENST00000261890 CUX2O14529 1486 aa10.86□□□□□ -0.67
RAB11A-201ENST00000261890 CARMIL1Q5VZK9 1371 aa10.86□□□□□ -0.67
RAB11A-201ENST00000261890 KCNH8Q96L42 1107 aa10.84□□□□□ -0.67
RAB11A-201ENST00000261890 NEFMP07197 916 aa10.84□□□□□ -0.67
RAB11A-201ENST00000261890 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
RAB11A-201ENST00000261890 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
RAB11A-201ENST00000261890 SOGA1O94964 1423 aa10.83□□□□□ -0.68
RAB11A-201ENST00000261890 ABCC8Q09428 1581 aa10.83□□□□□ -0.68
RAB11A-201ENST00000261890 ANP32CO43423 234 aa10.82□□□□□ -0.68
RAB11A-201ENST00000261890 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
RAB11A-201ENST00000261890 CARMIL2Q6F5E8 1435 aa10.82□□□□□ -0.68
RAB11A-201ENST00000261890 TONSLQ96HA7 1378 aa10.82□□□□□ -0.68
RAB11A-201ENST00000261890 SMARCA4P51532 1647 aa10.81□□□□□ -0.68
RAB11A-201ENST00000261890 CEP162Q5TB80 1403 aa10.81□□□□□ -0.68
RAB11A-201ENST00000261890 DIEXFQ68CQ4 756 aaKnown RBP10.8□□□□□ -0.68
RAB11A-201ENST00000261890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.8□□□□□ -0.68
RAB11A-201ENST00000261890 CFDP1Q9UEE9 299 aaPredicted RBP10.8□□□□□ -0.68
RAB11A-201ENST00000261890 CHIC2Q9UKJ5 165 aa10.79□□□□□ -0.68
RAB11A-201ENST00000261890 EIF4G1Q04637 1599 aaKnown RBP10.74□□□□□ -0.69
RAB11A-201ENST00000261890 NCAPD3P42695 1498 aa10.73□□□□□ -0.69
RAB11A-201ENST00000261890 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms