RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 PTPRGP23470 1445 aa18.74■□□□□ 0.59
HACD3-201ENST00000261875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.59
HACD3-201ENST00000261875 KIF14Q15058 1648 aa18.72■□□□□ 0.59
HACD3-201ENST00000261875 NUP160Q12769 1436 aa18.71■□□□□ 0.59
HACD3-201ENST00000261875 TROQ12816 1431 aaPredicted RBP18.71■□□□□ 0.58
HACD3-201ENST00000261875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.7■□□□□ 0.58
HACD3-201ENST00000261875 ARHGEF11O15085 1522 aa18.7■□□□□ 0.58
HACD3-201ENST00000261875 DAPK1P53355 1430 aa18.69■□□□□ 0.58
HACD3-201ENST00000261875 ABCC5O15440 1437 aa18.69■□□□□ 0.58
HACD3-201ENST00000261875 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
HACD3-201ENST00000261875 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
HACD3-201ENST00000261875 ATP10BO94823 1461 aa18.65■□□□□ 0.58
HACD3-201ENST00000261875 MYT1LQ9UL68 1186 aa18.64■□□□□ 0.57
HACD3-201ENST00000261875 MIA2Q96PC5 1412 aa18.64■□□□□ 0.57
HACD3-201ENST00000261875 CAMSAP2Q08AD1 1489 aa18.64■□□□□ 0.57
HACD3-201ENST00000261875 TSPY4P0CV99 314 aa18.63■□□□□ 0.57
HACD3-201ENST00000261875 TSPY10P0CW01 314 aa18.63■□□□□ 0.57
HACD3-201ENST00000261875 GPATCH8Q9UKJ3 1502 aaKnown RBP18.63■□□□□ 0.57
HACD3-201ENST00000261875 CHD1O14646 1710 aa18.63■□□□□ 0.57
HACD3-201ENST00000261875 PKD2Q13563 968 aa18.62■□□□□ 0.57
HACD3-201ENST00000261875 KDM2AQ9Y2K7 1162 aa18.62■□□□□ 0.57
HACD3-201ENST00000261875 TCOF1Q13428 1488 aaKnown RBP18.61■□□□□ 0.57
HACD3-201ENST00000261875 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
HACD3-201ENST00000261875 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
HACD3-201ENST00000261875 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
HACD3-201ENST00000261875 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
HACD3-201ENST00000261875 NUP155O75694 1391 aa18.55■□□□□ 0.56
HACD3-201ENST00000261875 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
HACD3-201ENST00000261875 ANP32CO43423 234 aa18.53■□□□□ 0.56
HACD3-201ENST00000261875 ANKRD30AQ9BXX3 1397 aa18.51■□□□□ 0.55
HACD3-201ENST00000261875 NCOA1Q15788 1441 aa18.51■□□□□ 0.55
HACD3-201ENST00000261875 TIMELESSQ9UNS1 1208 aa18.5■□□□□ 0.55
HACD3-201ENST00000261875 AKNAQ7Z591 1439 aa18.5■□□□□ 0.55
HACD3-201ENST00000261875 DNMT1P26358 1616 aaKnown RBP18.49■□□□□ 0.55
HACD3-201ENST00000261875 EIF4G2P78344 907 aaKnown RBP eCLIP18.49■□□□□ 0.55
HACD3-201ENST00000261875 ABCA8O94911 1581 aa18.49■□□□□ 0.55
HACD3-201ENST00000261875 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
HACD3-201ENST00000261875 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
HACD3-201ENST00000261875 BCANQ96GW7 911 aa18.48■□□□□ 0.55
HACD3-201ENST00000261875 GCC2Q8IWJ2 1684 aa18.47■□□□□ 0.55
HACD3-201ENST00000261875 KIF15Q9NS87 1388 aa18.47■□□□□ 0.55
HACD3-201ENST00000261875 C11orf95C9JLR9 678 aaPredicted RBP18.47■□□□□ 0.55
HACD3-201ENST00000261875 ANKRD30BQ9BXX2 1392 aa18.44■□□□□ 0.54
HACD3-201ENST00000261875 ARHGAP5Q13017 1502 aa18.44■□□□□ 0.54
HACD3-201ENST00000261875 WASHC2AQ641Q2 1341 aa18.44■□□□□ 0.54
HACD3-201ENST00000261875 ROCK1Q13464 1354 aa18.43■□□□□ 0.54
HACD3-201ENST00000261875 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
HACD3-201ENST00000261875 CDC42BPAQ5VT25 1732 aa18.42■□□□□ 0.54
HACD3-201ENST00000261875 DCAF11Q8TEB1 546 aa18.42■□□□□ 0.54
HACD3-201ENST00000261875 ABCC10Q5T3U5 1492 aa18.41■□□□□ 0.54
HACD3-201ENST00000261875 ITSN2Q9NZM3 1697 aa18.41■□□□□ 0.54
HACD3-201ENST00000261875 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
HACD3-201ENST00000261875 PZPP20742 1482 aa18.39■□□□□ 0.53
HACD3-201ENST00000261875 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
HACD3-201ENST00000261875 KDM5BQ9UGL1 1544 aa18.37■□□□□ 0.53
HACD3-201ENST00000261875 TTC37Q6PGP7 1564 aa18.36■□□□□ 0.53
HACD3-201ENST00000261875 CCDC184Q52MB2 194 aa18.35■□□□□ 0.53
HACD3-201ENST00000261875 FAM9BQ8IZU0 186 aa18.34■□□□□ 0.53
HACD3-201ENST00000261875 RPRD2Q5VT52 1461 aaKnown RBP18.33■□□□□ 0.52
HACD3-201ENST00000261875 CARD11Q9BXL7 1154 aa18.32■□□□□ 0.52
HACD3-201ENST00000261875 HNRNPUQ00839 825 aaKnown RBP eCLIP18.32■□□□□ 0.52
HACD3-201ENST00000261875 KIAA1107Q9UPP5 1409 aa18.32■□□□□ 0.52
HACD3-201ENST00000261875 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
HACD3-201ENST00000261875 SAMD9LQ8IVG5 1584 aa18.31■□□□□ 0.52
HACD3-201ENST00000261875 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.3■□□□□ 0.526e-6■■■■□ 21.5
HACD3-201ENST00000261875 ADCY10Q96PN6 1610 aa18.29■□□□□ 0.52
HACD3-201ENST00000261875 CCDC141Q6ZP82 1450 aa18.29■□□□□ 0.52
HACD3-201ENST00000261875 MBD5Q9P267 1494 aa18.28■□□□□ 0.52
HACD3-201ENST00000261875 ABCC2Q92887 1545 aa18.28■□□□□ 0.52
HACD3-201ENST00000261875 CDC42BPBQ9Y5S2 1711 aa18.28■□□□□ 0.52
HACD3-201ENST00000261875 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.52
HACD3-201ENST00000261875 TEX14Q8IWB6 1497 aa18.27■□□□□ 0.52
HACD3-201ENST00000261875 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.52
HACD3-201ENST00000261875 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.51
HACD3-201ENST00000261875 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
HACD3-201ENST00000261875 SPAG9O60271 1321 aaKnown RBP18.25■□□□□ 0.51
HACD3-201ENST00000261875 TRAPPC8Q9Y2L5 1435 aa18.25■□□□□ 0.51
HACD3-201ENST00000261875 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
HACD3-201ENST00000261875 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
HACD3-201ENST00000261875 USP47Q96K76 1375 aa18.24■□□□□ 0.51
HACD3-201ENST00000261875 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
HACD3-201ENST00000261875 MRS2Q9HD23 443 aa18.24■□□□□ 0.51
HACD3-201ENST00000261875 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
HACD3-201ENST00000261875 FKBP8Q14318 412 aa18.23■□□□□ 0.51
HACD3-201ENST00000261875 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
HACD3-201ENST00000261875 ADGRL2O95490 1459 aa18.23■□□□□ 0.51
HACD3-201ENST00000261875 CCDC7Q96M83 1385 aa18.23■□□□□ 0.51
HACD3-201ENST00000261875 CROCC2H7BZ55 1655 aa18.22■□□□□ 0.51
HACD3-201ENST00000261875 KIF3BO15066 747 aa18.22■□□□□ 0.51
HACD3-201ENST00000261875 SUPT16HQ9Y5B9 1047 aaKnown RBP18.22■□□□□ 0.51
HACD3-201ENST00000261875 ZCCHC11Q5TAX3 1644 aaKnown RBP18.2■□□□□ 0.5
HACD3-201ENST00000261875 CHGAP10645 457 aaKnown RBP18.2■□□□□ 0.5
HACD3-201ENST00000261875 SHROOM2Q13796 1616 aa18.2■□□□□ 0.5
HACD3-201ENST00000261875 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
HACD3-201ENST00000261875 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
HACD3-201ENST00000261875 CCDC144AA2RUR9 1427 aa18.18■□□□□ 0.5
HACD3-201ENST00000261875 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
HACD3-201ENST00000261875 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
HACD3-201ENST00000261875 CLASP1Q7Z460 1538 aa18.16■□□□□ 0.5
HACD3-201ENST00000261875 SALL2Q9Y467 1007 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms