RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 LRRIQ1Q96JM4 1722 aa18.44■□□□□ 0.54
PFDN1-201ENST00000261813 ATF5Q9Y2D1 282 aaPredicted RBP18.44■□□□□ 0.54
PFDN1-201ENST00000261813 VPS8Q8N3P4 1428 aa18.4■□□□□ 0.54
PFDN1-201ENST00000261813 GLI2P10070 1586 aa18.39■□□□□ 0.53
PFDN1-201ENST00000261813 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
PFDN1-201ENST00000261813 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
PFDN1-201ENST00000261813 KCNH8Q96L42 1107 aa18.36■□□□□ 0.53
PFDN1-201ENST00000261813 KDM6BO15054 1643 aa18.33■□□□□ 0.53
PFDN1-201ENST00000261813 MAGI3Q5TCQ9 1506 aa18.32■□□□□ 0.52
PFDN1-201ENST00000261813 MAP3K4Q9Y6R4 1608 aa18.31■□□□□ 0.52
PFDN1-201ENST00000261813 CDK11AQ9UQ88 783 aaPredicted RBP18.3■□□□□ 0.52
PFDN1-201ENST00000261813 TROQ12816 1431 aaPredicted RBP18.3■□□□□ 0.52
PFDN1-201ENST00000261813 ABCA9Q8IUA7 1624 aa18.29■□□□□ 0.52
PFDN1-201ENST00000261813 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
PFDN1-201ENST00000261813 PPRC1Q5VV67 1664 aaKnown RBP18.28■□□□□ 0.52
PFDN1-201ENST00000261813 KDM4FA0A1W2PPD8 638 aa18.28■□□□□ 0.52
PFDN1-201ENST00000261813 TSPOAP1O95153 1857 aa18.27■□□□□ 0.52
PFDN1-201ENST00000261813 CD109Q6YHK3 1445 aa18.27■□□□□ 0.52
PFDN1-201ENST00000261813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.27■□□□□ 0.51
PFDN1-201ENST00000261813 KIF14Q15058 1648 aa18.26■□□□□ 0.51
PFDN1-201ENST00000261813 TIAM1Q13009 1591 aa18.25■□□□□ 0.51
PFDN1-201ENST00000261813 TTC37Q6PGP7 1564 aa18.25■□□□□ 0.51
PFDN1-201ENST00000261813 ABCB7O75027 752 aa18.23■□□□□ 0.51
PFDN1-201ENST00000261813 MAP3K1Q13233 1512 aa18.21■□□□□ 0.51
PFDN1-201ENST00000261813 EHBP1L1Q8N3D4 1523 aa18.2■□□□□ 0.5
PFDN1-201ENST00000261813 MTUS2Q5JR59 1369 aa18.2■□□□□ 0.5
PFDN1-201ENST00000261813 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
PFDN1-201ENST00000261813 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
PFDN1-201ENST00000261813 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
PFDN1-201ENST00000261813 POLA2Q14181 598 aa18.15■□□□□ 0.5
PFDN1-201ENST00000261813 PLCH2O75038 1416 aa18.14■□□□□ 0.5
PFDN1-201ENST00000261813 MYO5CQ9NQX4 1742 aa18.14■□□□□ 0.49
PFDN1-201ENST00000261813 ARAP3Q8WWN8 1544 aa18.12■□□□□ 0.49
PFDN1-201ENST00000261813 NEO1Q92859 1461 aa18.11■□□□□ 0.49
PFDN1-201ENST00000261813 FANCAO15360 1455 aa18.11■□□□□ 0.49
PFDN1-201ENST00000261813 COL17A1Q9UMD9 1497 aaPredicted RBP18.11■□□□□ 0.49
PFDN1-201ENST00000261813 SUPT6HQ7KZ85 1726 aaKnown RBP18.1■□□□□ 0.49
PFDN1-201ENST00000261813 NCOA2Q15596 1464 aa18.1■□□□□ 0.49
PFDN1-201ENST00000261813 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
PFDN1-201ENST00000261813 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
PFDN1-201ENST00000261813 CDC42BPBQ9Y5S2 1711 aa18.09■□□□□ 0.49
PFDN1-201ENST00000261813 GPATCH8Q9UKJ3 1502 aaKnown RBP18.09■□□□□ 0.49
PFDN1-201ENST00000261813 ARHGAP5Q13017 1502 aa18.08■□□□□ 0.48
PFDN1-201ENST00000261813 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.48
PFDN1-201ENST00000261813 PHLDB1Q86UU1 1377 aa18.07■□□□□ 0.48
PFDN1-201ENST00000261813 AKNAQ7Z591 1439 aa18.07■□□□□ 0.48
PFDN1-201ENST00000261813 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
PFDN1-201ENST00000261813 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
PFDN1-201ENST00000261813 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
PFDN1-201ENST00000261813 ILDR1Q86SU0 546 aaPredicted RBP18.03■□□□□ 0.48
PFDN1-201ENST00000261813 ITSN2Q9NZM3 1697 aa18.01■□□□□ 0.47
PFDN1-201ENST00000261813 CFDP1Q9UEE9 299 aaPredicted RBP18■□□□□ 0.47
PFDN1-201ENST00000261813 FRMPD1Q5SYB0 1578 aa17.99■□□□□ 0.47
PFDN1-201ENST00000261813 SAMD9LQ8IVG5 1584 aa17.99■□□□□ 0.47
PFDN1-201ENST00000261813 SCAPERQ9BY12 1400 aa17.99■□□□□ 0.47
PFDN1-201ENST00000261813 DENND4BO75064 1496 aaPredicted RBP17.99■□□□□ 0.47
PFDN1-201ENST00000261813 ABCC1P33527 1531 aa17.99■□□□□ 0.47
PFDN1-201ENST00000261813 RAPGEF3O95398 923 aa17.98■□□□□ 0.47
PFDN1-201ENST00000261813 ARHGEF12Q9NZN5 1544 aa17.97■□□□□ 0.47
PFDN1-201ENST00000261813 ZNF777Q9ULD5 760 aaPredicted RBP17.97■□□□□ 0.47
PFDN1-201ENST00000261813 MYOM3Q5VTT5 1437 aa17.96■□□□□ 0.47
PFDN1-201ENST00000261813 RICTORQ6R327 1708 aa17.96■□□□□ 0.47
PFDN1-201ENST00000261813 POGZQ7Z3K3 1410 aa17.95■□□□□ 0.46
PFDN1-201ENST00000261813 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
PFDN1-201ENST00000261813 PPARGC1BQ86YN6 1023 aaKnown RBP17.94■□□□□ 0.46
PFDN1-201ENST00000261813 SYCP2Q9BX26 1530 aa17.93■□□□□ 0.46
PFDN1-201ENST00000261813 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
PFDN1-201ENST00000261813 CAMSAP2Q08AD1 1489 aa17.91■□□□□ 0.46
PFDN1-201ENST00000261813 PLEKHH2Q8IVE3 1493 aa17.91■□□□□ 0.46
PFDN1-201ENST00000261813 MIA2Q96PC5 1412 aa17.91■□□□□ 0.46
PFDN1-201ENST00000261813 KIAA1107Q9UPP5 1409 aa17.91■□□□□ 0.46
PFDN1-201ENST00000261813 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
PFDN1-201ENST00000261813 ZNF518AQ6AHZ1 1483 aa17.91■□□□□ 0.46
PFDN1-201ENST00000261813 HNRNPMP52272 730 aaKnown RBP eCLIP17.9■□□□□ 0.46
PFDN1-201ENST00000261813 AFAP1Q8N556 730 aa17.9■□□□□ 0.46
PFDN1-201ENST00000261813 KDM5CP41229 1560 aa17.89■□□□□ 0.45
PFDN1-201ENST00000261813 HECW2Q9P2P5 1572 aa17.89■□□□□ 0.45
PFDN1-201ENST00000261813 MBD5Q9P267 1494 aa17.88■□□□□ 0.45
PFDN1-201ENST00000261813 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
PFDN1-201ENST00000261813 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
PFDN1-201ENST00000261813 PTPN23Q9H3S7 1636 aa17.85■□□□□ 0.45
PFDN1-201ENST00000261813 TCOF1Q13428 1488 aaKnown RBP17.84■□□□□ 0.45
PFDN1-201ENST00000261813 MAGI2Q86UL8 1455 aa17.84■□□□□ 0.45
PFDN1-201ENST00000261813 ARHGEF40Q8TER5 1519 aa17.84■□□□□ 0.45
PFDN1-201ENST00000261813 YEATS2Q9ULM3 1422 aa17.84■□□□□ 0.45
PFDN1-201ENST00000261813 ZFYVE16Q7Z3T8 1539 aa17.83■□□□□ 0.45
PFDN1-201ENST00000261813 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.44
PFDN1-201ENST00000261813 ARHGEF5Q12774 1597 aa17.82■□□□□ 0.44
PFDN1-201ENST00000261813 CCDC141Q6ZP82 1450 aa17.82■□□□□ 0.44
PFDN1-201ENST00000261813 KIDINS220Q9ULH0 1771 aa17.79■□□□□ 0.44
PFDN1-201ENST00000261813 INO80Q9ULG1 1556 aaPredicted RBP17.79■□□□□ 0.44
PFDN1-201ENST00000261813 SPAG9O60271 1321 aaKnown RBP17.78■□□□□ 0.44
PFDN1-201ENST00000261813 ABCA6Q8N139 1617 aa17.78■□□□□ 0.44
PFDN1-201ENST00000261813 RSPH4AQ5TD94 716 aa17.78■□□□□ 0.44
PFDN1-201ENST00000261813 DIP2CQ9Y2E4 1556 aa17.78■□□□□ 0.44
PFDN1-201ENST00000261813 ATP7AQ04656 1500 aa17.77■□□□□ 0.44
PFDN1-201ENST00000261813 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.43
PFDN1-201ENST00000261813 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
PFDN1-201ENST00000261813 ABCC5O15440 1437 aa17.75■□□□□ 0.43
PFDN1-201ENST00000261813 ATP10AO60312 1499 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms