RNA–Protein interactions for RNA: ENST00000261776.9

VAC14-201, Transcript of Vac14, PIKFYVE complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAC14, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-201ENST00000261776 PKD2Q13563 968 aa23.27■■□□□ 1.32
VAC14-201ENST00000261776 THOC2Q8NI27 1593 aaKnown RBP23.26■■□□□ 1.31
VAC14-201ENST00000261776 DENND4BO75064 1496 aaPredicted RBP23.26■■□□□ 1.31
VAC14-201ENST00000261776 EHBP1L1Q8N3D4 1523 aa23.25■■□□□ 1.31
VAC14-201ENST00000261776 LAMC3Q9Y6N6 1575 aa23.24■■□□□ 1.31
VAC14-201ENST00000261776 ZNF608Q9ULD9 1512 aaPredicted RBP23.24■■□□□ 1.31
VAC14-201ENST00000261776 CCDC7Q96M83 1385 aa23.24■■□□□ 1.31
VAC14-201ENST00000261776 UGGT2Q9NYU1 1516 aa23.23■■□□□ 1.31
VAC14-201ENST00000261776 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
VAC14-201ENST00000261776 RGL3Q3MIN7 710 aa23.21■■□□□ 1.31
VAC14-201ENST00000261776 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
VAC14-201ENST00000261776 SAMD9Q5K651 1589 aa23.2■■□□□ 1.3
VAC14-201ENST00000261776 KDM5BQ9UGL1 1544 aa23.19■■□□□ 1.3
VAC14-201ENST00000261776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.19■■□□□ 1.32e-6■■□□□ 11.6
VAC14-201ENST00000261776 ABCA5Q8WWZ7 1642 aa23.18■■□□□ 1.3
VAC14-201ENST00000261776 CNTLNQ9NXG0 1405 aa23.18■■□□□ 1.3
VAC14-201ENST00000261776 ANKRD30BQ9BXX2 1392 aa23.13■■□□□ 1.29
VAC14-201ENST00000261776 CARD11Q9BXL7 1154 aa23.13■■□□□ 1.29
VAC14-201ENST00000261776 DAPK1P53355 1430 aa23.13■■□□□ 1.29
VAC14-201ENST00000261776 HNRNPMP52272 730 aaKnown RBP eCLIP23.13■■□□□ 1.29
VAC14-201ENST00000261776 DCAF11Q8TEB1 546 aa23.13■■□□□ 1.29
VAC14-201ENST00000261776 ABCC5O15440 1437 aa23.13■■□□□ 1.29
VAC14-201ENST00000261776 IQGAP2Q13576 1575 aa23.13■■□□□ 1.29
VAC14-201ENST00000261776 TMC1Q8TDI8 760 aa23.12■■□□□ 1.29
VAC14-201ENST00000261776 PPP4R2Q9NY27 417 aa23.12■■□□□ 1.29
VAC14-201ENST00000261776 AKNAQ7Z591 1439 aa23.09■■□□□ 1.29
VAC14-201ENST00000261776 HECW1Q76N89 1606 aa23.09■■□□□ 1.29
VAC14-201ENST00000261776 ST20-MTHFSA0A0A6YYL1 179 aa23.07■■□□□ 1.28
VAC14-201ENST00000261776 NBR1Q14596 966 aa23.07■■□□□ 1.28
VAC14-201ENST00000261776 PLB1Q6P1J6 1458 aa23.06■■□□□ 1.28
VAC14-201ENST00000261776 NUP155O75694 1391 aa23.06■■□□□ 1.28
VAC14-201ENST00000261776 USP47Q96K76 1375 aa23.05■■□□□ 1.28
VAC14-201ENST00000261776 NCOA1Q15788 1441 aa23.04■■□□□ 1.28
VAC14-201ENST00000261776 PLEKHD1A6NEE1 506 aa23.04■■□□□ 1.28
VAC14-201ENST00000261776 CCDC136Q96JN2 1154 aa23.04■■□□□ 1.28
VAC14-201ENST00000261776 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
VAC14-201ENST00000261776 TSPY4P0CV99 314 aa23.02■■□□□ 1.28
VAC14-201ENST00000261776 TSPY10P0CW01 314 aa23.02■■□□□ 1.28
VAC14-201ENST00000261776 TARBP1Q13395 1621 aaKnown RBP23.02■■□□□ 1.28
VAC14-201ENST00000261776 MIA2Q96PC5 1412 aa23.01■■□□□ 1.27
VAC14-201ENST00000261776 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
VAC14-201ENST00000261776 ZBED9Q6R2W3 1325 aa23■■□□□ 1.27
VAC14-201ENST00000261776 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
VAC14-201ENST00000261776 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
VAC14-201ENST00000261776 NPM2Q86SE8 214 aaKnown RBP23■■□□□ 1.27
VAC14-201ENST00000261776 RPRD2Q5VT52 1461 aaKnown RBP22.99■■□□□ 1.27
VAC14-201ENST00000261776 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
VAC14-201ENST00000261776 WDR62O43379 1518 aa22.98■■□□□ 1.27
VAC14-201ENST00000261776 DEKP35659 375 aaKnown RBP22.97■■□□□ 1.27
VAC14-201ENST00000261776 CC2D1BQ5T0F9 858 aaKnown RBP22.97■■□□□ 1.27
VAC14-201ENST00000261776 PBRM1Q86U86 1689 aa22.94■■□□□ 1.26
VAC14-201ENST00000261776 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
VAC14-201ENST00000261776 DISP1Q96F81 1524 aa22.92■■□□□ 1.26
VAC14-201ENST00000261776 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
VAC14-201ENST00000261776 ADAMTS12P58397 1594 aa22.91■■□□□ 1.26
VAC14-201ENST00000261776 TEX14Q8IWB6 1497 aa22.91■■□□□ 1.26
VAC14-201ENST00000261776 NBPF1Q3BBV0 1214 aa22.91■■□□□ 1.26
VAC14-201ENST00000261776 GCC2Q8IWJ2 1684 aa22.91■■□□□ 1.26
VAC14-201ENST00000261776 CAMSAP2Q08AD1 1489 aa22.91■■□□□ 1.26
VAC14-201ENST00000261776 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.25
VAC14-201ENST00000261776 SKAP1Q86WV1 359 aa22.88■■□□□ 1.25
VAC14-201ENST00000261776 ANKRD50Q9ULJ7 1429 aa22.88■■□□□ 1.25
VAC14-201ENST00000261776 NUDCQ9Y266 331 aa22.88■■□□□ 1.25
VAC14-201ENST00000261776 PZPP20742 1482 aa22.87■■□□□ 1.25
VAC14-201ENST00000261776 PAK3O75914 559 aaPredicted RBP22.86■■□□□ 1.25
VAC14-201ENST00000261776 KIAA0586Q9BVV6 1533 aa22.86■■□□□ 1.25
VAC14-201ENST00000261776 PLIN1O60240 522 aa22.85■■□□□ 1.25
VAC14-201ENST00000261776 ROCK1Q13464 1354 aa22.85■■□□□ 1.25
VAC14-201ENST00000261776 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
VAC14-201ENST00000261776 SPATA31E1Q6ZUB1 1445 aa22.84■■□□□ 1.25
VAC14-201ENST00000261776 PNISRQ8TF01 805 aaKnown RBP22.84■■□□□ 1.25
VAC14-201ENST00000261776 GPATCH8Q9UKJ3 1502 aaKnown RBP22.83■■□□□ 1.25
VAC14-201ENST00000261776 KIAA1107Q9UPP5 1409 aa22.83■■□□□ 1.25
VAC14-201ENST00000261776 MYT1LQ9UL68 1186 aa22.83■■□□□ 1.25
VAC14-201ENST00000261776 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.24
VAC14-201ENST00000261776 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.24
VAC14-201ENST00000261776 GRIN2AQ12879 1464 aa22.82■■□□□ 1.24
VAC14-201ENST00000261776 ROCK2O75116 1388 aaKnown RBP22.82■■□□□ 1.24
VAC14-201ENST00000261776 KIF14Q15058 1648 aa22.82■■□□□ 1.24
VAC14-201ENST00000261776 KIAA0556O60303 1618 aa22.81■■□□□ 1.24
VAC14-201ENST00000261776 EXOC6Q8TAG9 804 aa22.8■■□□□ 1.24
VAC14-201ENST00000261776 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
VAC14-201ENST00000261776 RAPGEF6Q8TEU7 1601 aa22.79■■□□□ 1.24
VAC14-201ENST00000261776 NOP58Q9Y2X3 529 aaKnown RBP22.78■■□□□ 1.24
VAC14-201ENST00000261776 DNMT1P26358 1616 aaKnown RBP22.78■■□□□ 1.24
VAC14-201ENST00000261776 KIF15Q9NS87 1388 aa22.77■■□□□ 1.23
VAC14-201ENST00000261776 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
VAC14-201ENST00000261776 BCORL1Q5H9F3 1711 aa22.74■■□□□ 1.23
VAC14-201ENST00000261776 C9orf84Q5VXU9 1444 aa22.73■■□□□ 1.23
VAC14-201ENST00000261776 CARMIL2Q6F5E8 1435 aa22.73■■□□□ 1.23
VAC14-201ENST00000261776 ERICH6BQ5W0A0 696 aa22.69■■□□□ 1.22
VAC14-201ENST00000261776 PANK3Q9H999 370 aa22.69■■□□□ 1.22
VAC14-201ENST00000261776 ANP32AP39687 249 aaKnown RBP22.68■■□□□ 1.22
VAC14-201ENST00000261776 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
VAC14-201ENST00000261776 RCAN3Q9UKA8 241 aa22.68■■□□□ 1.22
VAC14-201ENST00000261776 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
VAC14-201ENST00000261776 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
VAC14-201ENST00000261776 SMG6Q86US8 1419 aaKnown RBP22.66■■□□□ 1.22
VAC14-201ENST00000261776 LAS1LQ9Y4W2 734 aaKnown RBP22.65■■□□□ 1.22
VAC14-201ENST00000261776 RTN4Q9NQC3 1192 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms