RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
SLC52A1-201ENST00000254853 ABCC5O15440 1437 aa23.7■■□□□ 1.39
SLC52A1-201ENST00000254853 NCOA1Q15788 1441 aa23.69■■□□□ 1.38
SLC52A1-201ENST00000254853 ZNF644Q9H582 1327 aaPredicted RBP23.69■■□□□ 1.38
SLC52A1-201ENST00000254853 NBPF8Q3BBV2 869 aa23.69■■□□□ 1.38
SLC52A1-201ENST00000254853 CCDC184Q52MB2 194 aa23.69■■□□□ 1.38
SLC52A1-201ENST00000254853 CCDC7Q96M83 1385 aa23.69■■□□□ 1.38
SLC52A1-201ENST00000254853 RPRD2Q5VT52 1461 aaKnown RBP23.69■■□□□ 1.38
SLC52A1-201ENST00000254853 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
SLC52A1-201ENST00000254853 DISP1Q96F81 1524 aa23.67■■□□□ 1.38
SLC52A1-201ENST00000254853 ZNF608Q9ULD9 1512 aaPredicted RBP23.66■■□□□ 1.38
SLC52A1-201ENST00000254853 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
SLC52A1-201ENST00000254853 NUP153P49790 1475 aaKnown RBP23.65■■□□□ 1.38
SLC52A1-201ENST00000254853 TEX14Q8IWB6 1497 aa23.65■■□□□ 1.38
SLC52A1-201ENST00000254853 IRX6P78412 446 aaPredicted RBP23.64■■□□□ 1.38
SLC52A1-201ENST00000254853 KIAA0586Q9BVV6 1533 aa23.64■■□□□ 1.37
SLC52A1-201ENST00000254853 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
SLC52A1-201ENST00000254853 SLC4A1APQ9BWU0 796 aaKnown RBP23.62■■□□□ 1.37
SLC52A1-201ENST00000254853 IFT140Q96RY7 1462 aa23.6■■□□□ 1.37
SLC52A1-201ENST00000254853 RAPGEF6Q8TEU7 1601 aa23.6■■□□□ 1.37
SLC52A1-201ENST00000254853 SPATA31E1Q6ZUB1 1445 aa23.57■■□□□ 1.36
SLC52A1-201ENST00000254853 CDK11AQ9UQ88 783 aaPredicted RBP23.57■■□□□ 1.36
SLC52A1-201ENST00000254853 KIF7Q2M1P5 1343 aa23.56■■□□□ 1.36
SLC52A1-201ENST00000254853 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
SLC52A1-201ENST00000254853 MRS2Q9HD23 443 aa23.56■■□□□ 1.36
SLC52A1-201ENST00000254853 PZPP20742 1482 aa23.54■■□□□ 1.36
SLC52A1-201ENST00000254853 PRG4Q92954 1404 aaPredicted RBP23.54■■□□□ 1.36
SLC52A1-201ENST00000254853 GRIN2AQ12879 1464 aa23.53■■□□□ 1.36
SLC52A1-201ENST00000254853 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
SLC52A1-201ENST00000254853 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
SLC52A1-201ENST00000254853 CFDP1Q9UEE9 299 aaPredicted RBP23.5■■□□□ 1.35
SLC52A1-201ENST00000254853 ERICH6BQ5W0A0 696 aa23.48■■□□□ 1.35
SLC52A1-201ENST00000254853 POLR1AO95602 1720 aaPredicted RBP23.48■■□□□ 1.35
SLC52A1-201ENST00000254853 ZBED9Q6R2W3 1325 aa23.47■■□□□ 1.35
SLC52A1-201ENST00000254853 GPATCH8Q9UKJ3 1502 aaKnown RBP23.46■■□□□ 1.35
SLC52A1-201ENST00000254853 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
SLC52A1-201ENST00000254853 PPP4R2Q9NY27 417 aa23.44■■□□□ 1.34
SLC52A1-201ENST00000254853 ZNF777Q9ULD5 760 aaPredicted RBP23.44■■□□□ 1.34
SLC52A1-201ENST00000254853 PLB1Q6P1J6 1458 aa23.44■■□□□ 1.34
SLC52A1-201ENST00000254853 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
SLC52A1-201ENST00000254853 ADGBQ8N7X0 1667 aa23.44■■□□□ 1.34
SLC52A1-201ENST00000254853 ITSN2Q9NZM3 1697 aa23.43■■□□□ 1.34
SLC52A1-201ENST00000254853 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
SLC52A1-201ENST00000254853 KIF14Q15058 1648 aa23.42■■□□□ 1.34
SLC52A1-201ENST00000254853 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
SLC52A1-201ENST00000254853 MSH5O43196 834 aa23.4■■□□□ 1.34
SLC52A1-201ENST00000254853 PKD2Q13563 968 aa23.4■■□□□ 1.34
SLC52A1-201ENST00000254853 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
SLC52A1-201ENST00000254853 DHX29Q7Z478 1369 aaKnown RBP23.39■■□□□ 1.33
SLC52A1-201ENST00000254853 USP47Q96K76 1375 aa23.38■■□□□ 1.33
SLC52A1-201ENST00000254853 ADCY10Q96PN6 1610 aa23.38■■□□□ 1.33
SLC52A1-201ENST00000254853 CROCC2H7BZ55 1655 aa23.38■■□□□ 1.33
SLC52A1-201ENST00000254853 CEP170Q5SW79 1584 aa23.38■■□□□ 1.33
SLC52A1-201ENST00000254853 ANKRD30AQ9BXX3 1397 aa23.37■■□□□ 1.33
SLC52A1-201ENST00000254853 BCORL1Q5H9F3 1711 aa23.36■■□□□ 1.33
SLC52A1-201ENST00000254853 CHMP7Q8WUX9 453 aaPredicted RBP23.36■■□□□ 1.33
SLC52A1-201ENST00000254853 FANCIQ9NVI1 1328 aa23.35■■□□□ 1.33
SLC52A1-201ENST00000254853 POLR3GLQ9BT43 218 aa23.35■■□□□ 1.33
SLC52A1-201ENST00000254853 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
SLC52A1-201ENST00000254853 CNGB1Q14028 1251 aaPredicted RBP23.34■■□□□ 1.33
SLC52A1-201ENST00000254853 ANKRD50Q9ULJ7 1429 aa23.33■■□□□ 1.33
SLC52A1-201ENST00000254853 B4GALNT3Q6L9W6 998 aa23.32■■□□□ 1.32
SLC52A1-201ENST00000254853 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
SLC52A1-201ENST00000254853 KDM5CP41229 1560 aa23.31■■□□□ 1.32
SLC52A1-201ENST00000254853 FBLN2P98095 1184 aa23.3■■□□□ 1.32
SLC52A1-201ENST00000254853 CARMIL2Q6F5E8 1435 aa23.29■■□□□ 1.32
SLC52A1-201ENST00000254853 JPH4Q96JJ6 628 aa23.28■■□□□ 1.32
SLC52A1-201ENST00000254853 NUP155O75694 1391 aa23.27■■□□□ 1.32
SLC52A1-201ENST00000254853 UHRF1BP1Q6BDS2 1440 aa23.26■■□□□ 1.31
SLC52A1-201ENST00000254853 SMG6Q86US8 1419 aaKnown RBP23.26■■□□□ 1.31
SLC52A1-201ENST00000254853 ARID4BQ4LE39 1312 aaPredicted RBP23.26■■□□□ 1.31
SLC52A1-201ENST00000254853 PLEKHD1A6NEE1 506 aa23.25■■□□□ 1.31
SLC52A1-201ENST00000254853 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
SLC52A1-201ENST00000254853 C9orf84Q5VXU9 1444 aa23.24■■□□□ 1.31
SLC52A1-201ENST00000254853 CDC42BPAQ5VT25 1732 aa23.24■■□□□ 1.31
SLC52A1-201ENST00000254853 ABCC10Q5T3U5 1492 aa23.24■■□□□ 1.31
SLC52A1-201ENST00000254853 NUP160Q12769 1436 aa23.23■■□□□ 1.31
SLC52A1-201ENST00000254853 SHANK2Q9UPX8 1470 aa23.23■■□□□ 1.31
SLC52A1-201ENST00000254853 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
SLC52A1-201ENST00000254853 NUDCQ9Y266 331 aa23.21■■□□□ 1.31
SLC52A1-201ENST00000254853 ERCC6Q03468 1493 aa23.21■■□□□ 1.31
SLC52A1-201ENST00000254853 ABCA8O94911 1581 aa23.2■■□□□ 1.3
SLC52A1-201ENST00000254853 ATP10BO94823 1461 aa23.2■■□□□ 1.3
SLC52A1-201ENST00000254853 ROCK2O75116 1388 aaKnown RBP23.19■■□□□ 1.3
SLC52A1-201ENST00000254853 ARHGEF12Q9NZN5 1544 aa23.19■■□□□ 1.3
SLC52A1-201ENST00000254853 PNISRQ8TF01 805 aaKnown RBP23.18■■□□□ 1.3
SLC52A1-201ENST00000254853 KDM2AQ9Y2K7 1162 aa23.18■■□□□ 1.3
SLC52A1-201ENST00000254853 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
SLC52A1-201ENST00000254853 TSPY4P0CV99 314 aa23.17■■□□□ 1.3
SLC52A1-201ENST00000254853 TSPY10P0CW01 314 aa23.17■■□□□ 1.3
SLC52A1-201ENST00000254853 SENP3-EIF4A1A0A087X0R7 540 aa23.15■■□□□ 1.3
SLC52A1-201ENST00000254853 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.3
SLC52A1-201ENST00000254853 RNF123Q5XPI4 1314 aa23.14■■□□□ 1.3
SLC52A1-201ENST00000254853 KIF15Q9NS87 1388 aa23.14■■□□□ 1.3
SLC52A1-201ENST00000254853 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
SLC52A1-201ENST00000254853 TMC1Q8TDI8 760 aa23.14■■□□□ 1.29
SLC52A1-201ENST00000254853 ERICH6Q7L0X2 663 aa23.13■■□□□ 1.29
SLC52A1-201ENST00000254853 PTPRGP23470 1445 aa23.12■■□□□ 1.29
SLC52A1-201ENST00000254853 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
SLC52A1-201ENST00000254853 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms