RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 PLCH2O75038 1416 aa29.08■■■□□ 2.25
SBDS-201ENST00000246868 CDC42BPBQ9Y5S2 1711 aa29.08■■■□□ 2.25
SBDS-201ENST00000246868 ZNF777Q9ULD5 760 aaPredicted RBP29.07■■■□□ 2.24
SBDS-201ENST00000246868 ARAP3Q8WWN8 1544 aa29.06■■■□□ 2.24
SBDS-201ENST00000246868 GLI2P10070 1586 aa29.04■■■□□ 2.24
SBDS-201ENST00000246868 CAMSAP2Q08AD1 1489 aa29.03■■■□□ 2.24
SBDS-201ENST00000246868 DIP2BQ9P265 1576 aa29.03■■■□□ 2.24
SBDS-201ENST00000246868 EFCAB2Q5VUJ9 269 aa29.02■■■□□ 2.24
SBDS-201ENST00000246868 CD109Q6YHK3 1445 aa29.02■■■□□ 2.24
SBDS-201ENST00000246868 ZNF644Q9H582 1327 aaPredicted RBP29■■■□□ 2.23
SBDS-201ENST00000246868 ITGAEP38570 1179 aa29■■■□□ 2.23
SBDS-201ENST00000246868 FAM69CQ0P6D2 419 aa29■■■□□ 2.23
SBDS-201ENST00000246868 PLEKHH2Q8IVE3 1493 aa28.95■■■□□ 2.23
SBDS-201ENST00000246868 MAP3K4Q9Y6R4 1608 aa28.95■■■□□ 2.23
SBDS-201ENST00000246868 SAMD9LQ8IVG5 1584 aa28.95■■■□□ 2.23
SBDS-201ENST00000246868 FANCAO15360 1455 aa28.95■■■□□ 2.22
SBDS-201ENST00000246868 CFAP74Q9C0B2 1584 aa28.91■■■□□ 2.22
SBDS-201ENST00000246868 DNMT1P26358 1616 aaKnown RBP28.9■■■□□ 2.22
SBDS-201ENST00000246868 KIAA1107Q9UPP5 1409 aa28.89■■■□□ 2.22
SBDS-201ENST00000246868 KIF13AQ9H1H9 1805 aa28.88■■■□□ 2.21
SBDS-201ENST00000246868 DAPK1P53355 1430 aa28.88■■■□□ 2.21
SBDS-201ENST00000246868 RSPH4AQ5TD94 716 aa28.87■■■□□ 2.21
SBDS-201ENST00000246868 SYCP2Q9BX26 1530 aa28.86■■■□□ 2.21
SBDS-201ENST00000246868 ARHGEF5Q12774 1597 aa28.86■■■□□ 2.21
SBDS-201ENST00000246868 ABCC1P33527 1531 aa28.85■■■□□ 2.21
SBDS-201ENST00000246868 HNRNPMP52272 730 aaKnown RBP eCLIP28.85■■■□□ 2.21
SBDS-201ENST00000246868 ABCC5O15440 1437 aa28.85■■■□□ 2.21
SBDS-201ENST00000246868 AKNAQ7Z591 1439 aa28.83■■■□□ 2.21
SBDS-201ENST00000246868 MBD5Q9P267 1494 aa28.83■■■□□ 2.21
SBDS-201ENST00000246868 NEO1Q92859 1461 aa28.82■■■□□ 2.2
SBDS-201ENST00000246868 ADGRL1O94910 1474 aa28.82■■■□□ 2.2
SBDS-201ENST00000246868 CCDC141Q6ZP82 1450 aa28.82■■■□□ 2.2
SBDS-201ENST00000246868 PTPRKQ15262 1439 aa28.81■■■□□ 2.2
SBDS-201ENST00000246868 TSPOAP1O95153 1857 aa28.8■■■□□ 2.2
SBDS-201ENST00000246868 CROCC2H7BZ55 1655 aa28.8■■■□□ 2.2
SBDS-201ENST00000246868 TEX14Q8IWB6 1497 aa28.8■■■□□ 2.2
SBDS-201ENST00000246868 TSPY4P0CV99 314 aa28.8■■■□□ 2.2
SBDS-201ENST00000246868 TSPY10P0CW01 314 aa28.8■■■□□ 2.2
SBDS-201ENST00000246868 CHIC2Q9UKJ5 165 aa28.77■■■□□ 2.2
SBDS-201ENST00000246868 SHANK2Q9UPX8 1470 aa28.77■■■□□ 2.2
SBDS-201ENST00000246868 ARHGEF12Q9NZN5 1544 aa28.77■■■□□ 2.2
SBDS-201ENST00000246868 SCAPERQ9BY12 1400 aa28.76■■■□□ 2.19
SBDS-201ENST00000246868 TRHP20396 242 aaPredicted RBP28.73■■■□□ 2.19
SBDS-201ENST00000246868 ROCK1Q13464 1354 aa28.73■■■□□ 2.19
SBDS-201ENST00000246868 PPRC1Q5VV67 1664 aaKnown RBP28.73■■■□□ 2.19
SBDS-201ENST00000246868 C9orf84Q5VXU9 1444 aa28.73■■■□□ 2.19
SBDS-201ENST00000246868 ADGBQ8N7X0 1667 aa28.72■■■□□ 2.19
SBDS-201ENST00000246868 TRAPPC8Q9Y2L5 1435 aa28.71■■■□□ 2.19
SBDS-201ENST00000246868 ANKRD30AQ9BXX3 1397 aa28.69■■■□□ 2.18
SBDS-201ENST00000246868 HFM1A2PYH4 1435 aa28.68■■■□□ 2.18
SBDS-201ENST00000246868 ADGRL2O95490 1459 aa28.68■■■□□ 2.18
SBDS-201ENST00000246868 SETD5Q9C0A6 1442 aa28.67■■■□□ 2.18
SBDS-201ENST00000246868 ZNF518AQ6AHZ1 1483 aa28.67■■■□□ 2.18
SBDS-201ENST00000246868 MAST1Q9Y2H9 1570 aa28.67■■■□□ 2.18
SBDS-201ENST00000246868 RRP7BPQ9NSQ0 103 aa28.66■■■□□ 2.18
SBDS-201ENST00000246868 AFAP1Q8N556 730 aa28.65■■■□□ 2.18
SBDS-201ENST00000246868 DENND4BO75064 1496 aaPredicted RBP28.65■■■□□ 2.18
SBDS-201ENST00000246868 NCOA1Q15788 1441 aa28.64■■■□□ 2.18
SBDS-201ENST00000246868 POGZQ7Z3K3 1410 aa28.64■■■□□ 2.18
SBDS-201ENST00000246868 SPAG9O60271 1321 aaKnown RBP28.64■■■□□ 2.17
SBDS-201ENST00000246868 NAIPQ13075 1403 aa28.63■■■□□ 2.17
SBDS-201ENST00000246868 GCC2Q8IWJ2 1684 aa28.62■■■□□ 2.17
SBDS-201ENST00000246868 RTEL1-TNFRSF6BF6WH68 1400 aa28.59■■■□□ 2.17
SBDS-201ENST00000246868 RAB3GAP2Q9H2M9 1393 aa28.59■■■□□ 2.17
SBDS-201ENST00000246868 MYT1LQ9UL68 1186 aa28.58■■■□□ 2.17
SBDS-201ENST00000246868 PLXNC1O60486 1568 aa28.57■■■□□ 2.16
SBDS-201ENST00000246868 KDM5CP41229 1560 aa28.56■■■□□ 2.16
SBDS-201ENST00000246868 KIF15Q9NS87 1388 aa28.56■■■□□ 2.16
SBDS-201ENST00000246868 ZFYVE16Q7Z3T8 1539 aa28.56■■■□□ 2.16
SBDS-201ENST00000246868 ATP7AQ04656 1500 aa28.55■■■□□ 2.16
SBDS-201ENST00000246868 RAPGEF3O95398 923 aa28.54■■■□□ 2.16
SBDS-201ENST00000246868 HRCP23327 699 aa28.54■■■□□ 2.16
SBDS-201ENST00000246868 RICTORQ6R327 1708 aa28.54■■■□□ 2.16
SBDS-201ENST00000246868 INO80Q9ULG1 1556 aaPredicted RBP28.54■■■□□ 2.16
SBDS-201ENST00000246868 HECW2Q9P2P5 1572 aa28.51■■■□□ 2.15
SBDS-201ENST00000246868 MLH3Q9UHC1 1453 aa28.51■■■□□ 2.15
SBDS-201ENST00000246868 ACIN1Q9UKV3 1341 aaKnown RBP28.49■■■□□ 2.15
SBDS-201ENST00000246868 ANKRD50Q9ULJ7 1429 aa28.48■■■□□ 2.15
SBDS-201ENST00000246868 DUOX2Q9NRD8 1548 aa28.47■■■□□ 2.15
SBDS-201ENST00000246868 KIDINS220Q9ULH0 1771 aa28.47■■■□□ 2.15
SBDS-201ENST00000246868 FRMPD1Q5SYB0 1578 aa28.46■■■□□ 2.15
SBDS-201ENST00000246868 ZMYM4Q5VZL5 1548 aa28.44■■■□□ 2.14
SBDS-201ENST00000246868 KDM6BO15054 1643 aa28.42■■■□□ 2.14
SBDS-201ENST00000246868 MAGI2Q86UL8 1455 aa28.4■■■□□ 2.14
SBDS-201ENST00000246868 ERBINQ96RT1 1412 aa28.4■■■□□ 2.14
SBDS-201ENST00000246868 COL17A1Q9UMD9 1497 aaPredicted RBP28.4■■■□□ 2.14
SBDS-201ENST00000246868 CCER1Q8TC90 406 aaPredicted RBP28.37■■■□□ 2.13
SBDS-201ENST00000246868 TRIM52Q96A61 297 aa28.36■■■□□ 2.13
SBDS-201ENST00000246868 DHX29Q7Z478 1369 aaKnown RBP28.35■■■□□ 2.13
SBDS-201ENST00000246868 ABCA6Q8N139 1617 aa28.35■■■□□ 2.13
SBDS-201ENST00000246868 A2MP01023 1474 aa28.34■■■□□ 2.13
SBDS-201ENST00000246868 DIP2CQ9Y2E4 1556 aa28.32■■■□□ 2.12
SBDS-201ENST00000246868 YEATS2Q9ULM3 1422 aa28.31■■■□□ 2.12
SBDS-201ENST00000246868 DHX57Q6P158 1386 aaKnown RBP28.3■■■□□ 2.12
SBDS-201ENST00000246868 EIF2AK4Q9P2K8 1649 aaKnown RBP28.29■■■□□ 2.12
SBDS-201ENST00000246868 ATP10AO60312 1499 aa28.25■■■□□ 2.11
SBDS-201ENST00000246868 ARHGEF40Q8TER5 1519 aa28.25■■■□□ 2.11
SBDS-201ENST00000246868 UNC13BO14795 1591 aa28.24■■■□□ 2.11
SBDS-201ENST00000246868 NUP155O75694 1391 aa28.24■■■□□ 2.11
SBDS-201ENST00000246868 KIF3BO15066 747 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms