RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 KDM6BO15054 1643 aa16.8■□□□□ 0.28
NR1D1-201ENST00000246672 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
NR1D1-201ENST00000246672 NUDCQ9Y266 331 aa16.8■□□□□ 0.28
NR1D1-201ENST00000246672 SUPT6HQ7KZ85 1726 aaKnown RBP16.79■□□□□ 0.28
NR1D1-201ENST00000246672 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
NR1D1-201ENST00000246672 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
NR1D1-201ENST00000246672 USP35Q9P2H5 1018 aa16.77■□□□□ 0.28
NR1D1-201ENST00000246672 WASHC2CQ9Y4E1 1318 aa16.77■□□□□ 0.28
NR1D1-201ENST00000246672 GCC2Q8IWJ2 1684 aa16.76■□□□□ 0.27
NR1D1-201ENST00000246672 GRIN2BQ13224 1484 aa16.76■□□□□ 0.27
NR1D1-201ENST00000246672 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
NR1D1-201ENST00000246672 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
NR1D1-201ENST00000246672 UGGT2Q9NYU1 1516 aa16.74■□□□□ 0.27
NR1D1-201ENST00000246672 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
NR1D1-201ENST00000246672 CUL7Q14999 1698 aa16.74■□□□□ 0.27
NR1D1-201ENST00000246672 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
NR1D1-201ENST00000246672 MAGI3Q5TCQ9 1506 aa16.72■□□□□ 0.27
NR1D1-201ENST00000246672 SPATA31E1Q6ZUB1 1445 aa16.72■□□□□ 0.27
NR1D1-201ENST00000246672 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
NR1D1-201ENST00000246672 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
NR1D1-201ENST00000246672 SAMD9Q5K651 1589 aa16.7■□□□□ 0.26
NR1D1-201ENST00000246672 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
NR1D1-201ENST00000246672 PDE4AP27815 886 aa16.7■□□□□ 0.26
NR1D1-201ENST00000246672 TCOF1Q13428 1488 aaKnown RBP16.7■□□□□ 0.26
NR1D1-201ENST00000246672 ABCA5Q8WWZ7 1642 aa16.69■□□□□ 0.26
NR1D1-201ENST00000246672 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
NR1D1-201ENST00000246672 DHX29Q7Z478 1369 aaKnown RBP16.68■□□□□ 0.26
NR1D1-201ENST00000246672 PPM1GO15355 546 aaPredicted RBP16.68■□□□□ 0.26
NR1D1-201ENST00000246672 RPRD2Q5VT52 1461 aaKnown RBP16.68■□□□□ 0.26
NR1D1-201ENST00000246672 TEX14Q8IWB6 1497 aa16.68■□□□□ 0.26
NR1D1-201ENST00000246672 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
NR1D1-201ENST00000246672 DNMBPQ6XZF7 1577 aa16.68■□□□□ 0.26
NR1D1-201ENST00000246672 POLR1AO95602 1720 aaPredicted RBP16.68■□□□□ 0.26
NR1D1-201ENST00000246672 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
NR1D1-201ENST00000246672 TCERG1O14776 1098 aaKnown RBP16.67■□□□□ 0.26
NR1D1-201ENST00000246672 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
NR1D1-201ENST00000246672 EIF5BO60841 1220 aaKnown RBP16.66■□□□□ 0.26
NR1D1-201ENST00000246672 BACH2Q9BYV9 841 aa16.66■□□□□ 0.26
NR1D1-201ENST00000246672 GSE1Q14687 1217 aa16.64■□□□□ 0.25
NR1D1-201ENST00000246672 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.25
NR1D1-201ENST00000246672 PNISRQ8TF01 805 aaKnown RBP16.62■□□□□ 0.25
NR1D1-201ENST00000246672 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
NR1D1-201ENST00000246672 ARID3CA6NKF2 412 aa16.6■□□□□ 0.25
NR1D1-201ENST00000246672 TMC1Q8TDI8 760 aa16.59■□□□□ 0.25
NR1D1-201ENST00000246672 RRP1P56182 461 aaKnown RBP16.59■□□□□ 0.25
NR1D1-201ENST00000246672 BCORL1Q5H9F3 1711 aa16.59■□□□□ 0.25
NR1D1-201ENST00000246672 ZNF326Q5BKZ1 582 aaKnown RBP16.58■□□□□ 0.25
NR1D1-201ENST00000246672 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
NR1D1-201ENST00000246672 MIA2Q96PC5 1412 aa16.58■□□□□ 0.24
NR1D1-201ENST00000246672 MS4A1P11836 297 aa16.57■□□□□ 0.24
NR1D1-201ENST00000246672 NFKBIBQ15653 356 aa16.57■□□□□ 0.24
NR1D1-201ENST00000246672 USP47Q96K76 1375 aa16.56■□□□□ 0.24
NR1D1-201ENST00000246672 FRAT1Q92837 279 aaPredicted RBP16.56■□□□□ 0.24
NR1D1-201ENST00000246672 EPRSP07814 1512 aaKnown RBP16.54■□□□□ 0.24
NR1D1-201ENST00000246672 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
NR1D1-201ENST00000246672 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
NR1D1-201ENST00000246672 DAPK1P53355 1430 aa16.53■□□□□ 0.24
NR1D1-201ENST00000246672 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
NR1D1-201ENST00000246672 KIF21AQ7Z4S6 1674 aa16.52■□□□□ 0.23
NR1D1-201ENST00000246672 ROCK1Q13464 1354 aa16.52■□□□□ 0.23
NR1D1-201ENST00000246672 DDRGK1Q96HY6 314 aa16.52■□□□□ 0.23
NR1D1-201ENST00000246672 RCAN3Q9UKA8 241 aa16.51■□□□□ 0.23
NR1D1-201ENST00000246672 NESP48681 1621 aa16.51■□□□□ 0.23
NR1D1-201ENST00000246672 ZNF644Q9H582 1327 aaPredicted RBP16.51■□□□□ 0.23
NR1D1-201ENST00000246672 ABCC5O15440 1437 aa16.51■□□□□ 0.23
NR1D1-201ENST00000246672 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
NR1D1-201ENST00000246672 LRPPRCP42704 1394 aaKnown RBP16.5■□□□□ 0.23
NR1D1-201ENST00000246672 MBD5Q9P267 1494 aa16.49■□□□□ 0.23
NR1D1-201ENST00000246672 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
NR1D1-201ENST00000246672 KDM5CP41229 1560 aa16.47■□□□□ 0.23
NR1D1-201ENST00000246672 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
NR1D1-201ENST00000246672 PZPP20742 1482 aa16.47■□□□□ 0.23
NR1D1-201ENST00000246672 KIF15Q9NS87 1388 aa16.46■□□□□ 0.23
NR1D1-201ENST00000246672 DNMT1P26358 1616 aaKnown RBP16.46■□□□□ 0.23
NR1D1-201ENST00000246672 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.22
NR1D1-201ENST00000246672 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
NR1D1-201ENST00000246672 BRD4O60885 1362 aaPredicted RBP16.45■□□□□ 0.22
NR1D1-201ENST00000246672 ROCK2O75116 1388 aaKnown RBP16.45■□□□□ 0.22
NR1D1-201ENST00000246672 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
NR1D1-201ENST00000246672 KIF14Q15058 1648 aa16.44■□□□□ 0.22
NR1D1-201ENST00000246672 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
NR1D1-201ENST00000246672 PLIN1O60240 522 aa16.43■□□□□ 0.22
NR1D1-201ENST00000246672 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
NR1D1-201ENST00000246672 FAM43AQ8N2R8 423 aa16.42■□□□□ 0.22
NR1D1-201ENST00000246672 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
NR1D1-201ENST00000246672 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
NR1D1-201ENST00000246672 CDCA7LQ96GN5 454 aa16.41■□□□□ 0.22
NR1D1-201ENST00000246672 WDR62O43379 1518 aa16.41■□□□□ 0.22
NR1D1-201ENST00000246672 PKD2Q13563 968 aa16.41■□□□□ 0.22
NR1D1-201ENST00000246672 KIAA1107Q9UPP5 1409 aa16.41■□□□□ 0.22
NR1D1-201ENST00000246672 RALBP1Q15311 655 aa16.4■□□□□ 0.22
NR1D1-201ENST00000246672 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
NR1D1-201ENST00000246672 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
NR1D1-201ENST00000246672 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
NR1D1-201ENST00000246672 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
NR1D1-201ENST00000246672 IQGAP2Q13576 1575 aa16.36■□□□□ 0.21
NR1D1-201ENST00000246672 KDM2AQ9Y2K7 1162 aa16.36■□□□□ 0.21
NR1D1-201ENST00000246672 KTN1Q86UP2 1357 aaKnown RBP16.36■□□□□ 0.21
NR1D1-201ENST00000246672 UHRF1BP1Q6BDS2 1440 aa16.34■□□□□ 0.21
NR1D1-201ENST00000246672 NLRP13Q86W25 1043 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms