RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 SENP3-EIF4A1A0A087X0R7 540 aa23.5■■□□□ 1.35
SSPN-201ENST00000242729 CHMP7Q8WUX9 453 aaPredicted RBP23.5■■□□□ 1.35
SSPN-201ENST00000242729 WDR62O43379 1518 aa23.48■■□□□ 1.35
SSPN-201ENST00000242729 TCOF1Q13428 1488 aaKnown RBP23.47■■□□□ 1.35
SSPN-201ENST00000242729 PRG4Q92954 1404 aaPredicted RBP23.47■■□□□ 1.35
SSPN-201ENST00000242729 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
SSPN-201ENST00000242729 CFDP1Q9UEE9 299 aaPredicted RBP23.45■■□□□ 1.34
SSPN-201ENST00000242729 DAPK1P53355 1430 aa23.43■■□□□ 1.34
SSPN-201ENST00000242729 DISP1Q96F81 1524 aa23.42■■□□□ 1.34
SSPN-201ENST00000242729 ABCC5O15440 1437 aa23.42■■□□□ 1.34
SSPN-201ENST00000242729 NUP153P49790 1475 aaKnown RBP23.42■■□□□ 1.34
SSPN-201ENST00000242729 MIA2Q96PC5 1412 aa23.4■■□□□ 1.34
SSPN-201ENST00000242729 CDK11AQ9UQ88 783 aaPredicted RBP23.4■■□□□ 1.34
SSPN-201ENST00000242729 PLB1Q6P1J6 1458 aa23.4■■□□□ 1.34
SSPN-201ENST00000242729 GCC2Q8IWJ2 1684 aa23.37■■□□□ 1.33
SSPN-201ENST00000242729 ERCC6Q03468 1493 aa23.36■■□□□ 1.33
SSPN-201ENST00000242729 KIAA0586Q9BVV6 1533 aa23.36■■□□□ 1.33
SSPN-201ENST00000242729 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
SSPN-201ENST00000242729 ANKRD30BQ9BXX2 1392 aa23.35■■□□□ 1.33
SSPN-201ENST00000242729 KIAA0556O60303 1618 aa23.35■■□□□ 1.33
SSPN-201ENST00000242729 GRIN2AQ12879 1464 aa23.34■■□□□ 1.33
SSPN-201ENST00000242729 MRS2Q9HD23 443 aa23.33■■□□□ 1.33
SSPN-201ENST00000242729 PKD2Q13563 968 aa23.31■■□□□ 1.32
SSPN-201ENST00000242729 JPH4Q96JJ6 628 aa23.31■■□□□ 1.32
SSPN-201ENST00000242729 CCDC7Q96M83 1385 aa23.3■■□□□ 1.32
SSPN-201ENST00000242729 PRKRIP1Q9H875 184 aaPredicted RBP23.29■■□□□ 1.32
SSPN-201ENST00000242729 EIF4G3O43432 1585 aaKnown RBP23.29■■□□□ 1.32
SSPN-201ENST00000242729 KIF7Q2M1P5 1343 aa23.29■■□□□ 1.32
SSPN-201ENST00000242729 KDM2AQ9Y2K7 1162 aa23.28■■□□□ 1.32
SSPN-201ENST00000242729 AKNAQ7Z591 1439 aa23.27■■□□□ 1.32
SSPN-201ENST00000242729 RAPGEF6Q8TEU7 1601 aa23.27■■□□□ 1.32
SSPN-201ENST00000242729 CNTLNQ9NXG0 1405 aa23.26■■□□□ 1.31
SSPN-201ENST00000242729 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
SSPN-201ENST00000242729 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
SSPN-201ENST00000242729 ROCK1Q13464 1354 aa23.23■■□□□ 1.31
SSPN-201ENST00000242729 KIF14Q15058 1648 aa23.23■■□□□ 1.31
SSPN-201ENST00000242729 DNMT1P26358 1616 aaKnown RBP23.22■■□□□ 1.31
SSPN-201ENST00000242729 TROQ12816 1431 aaPredicted RBP23.22■■□□□ 1.31
SSPN-201ENST00000242729 HNRNPMP52272 730 aaKnown RBP eCLIP23.22■■□□□ 1.31
SSPN-201ENST00000242729 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
SSPN-201ENST00000242729 TEX14Q8IWB6 1497 aa23.21■■□□□ 1.31
SSPN-201ENST00000242729 PLEKHD1A6NEE1 506 aa23.2■■□□□ 1.3
SSPN-201ENST00000242729 NCOA1Q15788 1441 aa23.2■■□□□ 1.3
SSPN-201ENST00000242729 GPATCH8Q9UKJ3 1502 aaKnown RBP23.2■■□□□ 1.3
SSPN-201ENST00000242729 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
SSPN-201ENST00000242729 PZPP20742 1482 aa23.18■■□□□ 1.3
SSPN-201ENST00000242729 NUP155O75694 1391 aa23.15■■□□□ 1.3
SSPN-201ENST00000242729 SYNJ2O15056 1496 aa23.11■■□□□ 1.29
SSPN-201ENST00000242729 USP47Q96K76 1375 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 ANKRD30AQ9BXX3 1397 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 CARMIL2Q6F5E8 1435 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 ANKRD50Q9ULJ7 1429 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 TSPY4P0CV99 314 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 TSPY10P0CW01 314 aa23.1■■□□□ 1.29
SSPN-201ENST00000242729 B4GALNT3Q6L9W6 998 aa23.09■■□□□ 1.29
SSPN-201ENST00000242729 SPATA31E1Q6ZUB1 1445 aa23.09■■□□□ 1.29
SSPN-201ENST00000242729 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
SSPN-201ENST00000242729 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.09■■□□□ 1.29
SSPN-201ENST00000242729 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
SSPN-201ENST00000242729 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
SSPN-201ENST00000242729 KIAA1107Q9UPP5 1409 aa23.07■■□□□ 1.28
SSPN-201ENST00000242729 MYT1Q01538 1121 aa23.07■■□□□ 1.28
SSPN-201ENST00000242729 MAGI1Q96QZ7 1491 aaPredicted RBP23.06■■□□□ 1.28
SSPN-201ENST00000242729 ANP32EQ9BTT0 268 aa23.04■■□□□ 1.28
SSPN-201ENST00000242729 ATP10BO94823 1461 aa23.03■■□□□ 1.28
SSPN-201ENST00000242729 ST20-MTHFSA0A0A6YYL1 179 aa23.02■■□□□ 1.28
SSPN-201ENST00000242729 SALL2Q9Y467 1007 aaPredicted RBP23.02■■□□□ 1.28
SSPN-201ENST00000242729 C9orf84Q5VXU9 1444 aa23.01■■□□□ 1.27
SSPN-201ENST00000242729 KIF15Q9NS87 1388 aa22.98■■□□□ 1.27
SSPN-201ENST00000242729 ZBED9Q6R2W3 1325 aa22.97■■□□□ 1.27
SSPN-201ENST00000242729 BCORL1Q5H9F3 1711 aa22.97■■□□□ 1.27
SSPN-201ENST00000242729 DHX29Q7Z478 1369 aaKnown RBP22.96■■□□□ 1.27
SSPN-201ENST00000242729 ITSN2Q9NZM3 1697 aa22.95■■□□□ 1.26
SSPN-201ENST00000242729 NUP160Q12769 1436 aa22.95■■□□□ 1.26
SSPN-201ENST00000242729 TMC1Q8TDI8 760 aa22.94■■□□□ 1.26
SSPN-201ENST00000242729 PTPRGP23470 1445 aa22.93■■□□□ 1.26
SSPN-201ENST00000242729 MSH5O43196 834 aa22.92■■□□□ 1.26
SSPN-201ENST00000242729 PPP4R2Q9NY27 417 aa22.92■■□□□ 1.26
SSPN-201ENST00000242729 ADGRL2O95490 1459 aa22.91■■□□□ 1.26
SSPN-201ENST00000242729 ADGBQ8N7X0 1667 aa22.91■■□□□ 1.26
SSPN-201ENST00000242729 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 NBPF1Q3BBV0 1214 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 CDC42BPAQ5VT25 1732 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 ABCC10Q5T3U5 1492 aa22.9■■□□□ 1.26
SSPN-201ENST00000242729 ROCK2O75116 1388 aaKnown RBP22.87■■□□□ 1.25
SSPN-201ENST00000242729 CROCC2H7BZ55 1655 aa22.86■■□□□ 1.25
SSPN-201ENST00000242729 ABCA8O94911 1581 aa22.86■■□□□ 1.25
SSPN-201ENST00000242729 ADCY10Q96PN6 1610 aa22.84■■□□□ 1.25
SSPN-201ENST00000242729 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
SSPN-201ENST00000242729 KDM5CP41229 1560 aa22.82■■□□□ 1.24
SSPN-201ENST00000242729 CC2D1BQ5T0F9 858 aaKnown RBP22.79■■□□□ 1.24
SSPN-201ENST00000242729 NUDCQ9Y266 331 aa22.77■■□□□ 1.24
SSPN-201ENST00000242729 RALGAPBQ86X10 1494 aa22.76■■□□□ 1.23
SSPN-201ENST00000242729 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
SSPN-201ENST00000242729 SYCP2Q9BX26 1530 aa22.74■■□□□ 1.23
SSPN-201ENST00000242729 SAMD9LQ8IVG5 1584 aa22.74■■□□□ 1.23
SSPN-201ENST00000242729 ARHGAP5Q13017 1502 aa22.73■■□□□ 1.23
SSPN-201ENST00000242729 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
SSPN-201ENST00000242729 CCDC136Q96JN2 1154 aa22.72■■□□□ 1.23
SSPN-201ENST00000242729 POLR1AO95602 1720 aaPredicted RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms