RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
COPA-201ENST00000241704 OSCARQ8IYS5 282 aa14.5□□□□□ -0.09
COPA-201ENST00000241704 DCAF11Q8TEB1 546 aa14.5□□□□□ -0.09
COPA-201ENST00000241704 PEG3Q9GZU2 1588 aa14.5□□□□□ -0.09
COPA-201ENST00000241704 PRXQ9BXM0 1461 aa14.5□□□□□ -0.09
COPA-201ENST00000241704 B4GALNT3Q6L9W6 998 aa14.49□□□□□ -0.09
COPA-201ENST00000241704 POGKQ9P215 609 aa14.49□□□□□ -0.09
COPA-201ENST00000241704 PTPRGP23470 1445 aa14.49□□□□□ -0.09
COPA-201ENST00000241704 TOPBP1Q92547 1522 aa14.49□□□□□ -0.09
COPA-201ENST00000241704 HDGFP51858 240 aaKnown RBP14.48□□□□□ -0.09
COPA-201ENST00000241704 FOXD1Q16676 465 aa14.48□□□□□ -0.09
COPA-201ENST00000241704 NUP155O75694 1391 aa14.48□□□□□ -0.09
COPA-201ENST00000241704 GRIN2BQ13224 1484 aa14.47□□□□□ -0.09
COPA-201ENST00000241704 HNRNPMP52272 730 aaKnown RBP eCLIP14.46□□□□□ -0.095e-9■□□□□ 9.9
COPA-201ENST00000241704 IPO9Q96P70 1041 aaKnown RBP14.46□□□□□ -0.09
COPA-201ENST00000241704 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.1
COPA-201ENST00000241704 LAS1LQ9Y4W2 734 aaKnown RBP14.45□□□□□ -0.1
COPA-201ENST00000241704 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
COPA-201ENST00000241704 KNSTRNQ9Y448 316 aa14.44□□□□□ -0.1
COPA-201ENST00000241704 DHX57Q6P158 1386 aaKnown RBP14.44□□□□□ -0.1
COPA-201ENST00000241704 UNC13AQ9UPW8 1703 aa14.43□□□□□ -0.1
COPA-201ENST00000241704 UBE2Q2Q8WVN8 375 aa14.42□□□□□ -0.1
COPA-201ENST00000241704 ARAP1Q96P48 1450 aa14.42□□□□□ -0.1
COPA-201ENST00000241704 HSPA5P11021 654 aaKnown RBP14.42□□□□□ -0.1
COPA-201ENST00000241704 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
COPA-201ENST00000241704 DNMBPQ6XZF7 1577 aa14.4□□□□□ -0.1
COPA-201ENST00000241704 DDRGK1Q96HY6 314 aa14.4□□□□□ -0.1
COPA-201ENST00000241704 IFT140Q96RY7 1462 aa14.4□□□□□ -0.1
COPA-201ENST00000241704 LRRC9Q6ZRR7 1453 aa14.39□□□□□ -0.11
COPA-201ENST00000241704 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
COPA-201ENST00000241704 TMF1P82094 1093 aa14.38□□□□□ -0.11
COPA-201ENST00000241704 IL27Q8NEV9 243 aa14.38□□□□□ -0.11
COPA-201ENST00000241704 USP35Q9P2H5 1018 aa14.38□□□□□ -0.11
COPA-201ENST00000241704 SPAG9O60271 1321 aaKnown RBP14.38□□□□□ -0.11
COPA-201ENST00000241704 L3MBTL2Q969R5 705 aa14.37□□□□□ -0.11
COPA-201ENST00000241704 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
COPA-201ENST00000241704 PHLDB1Q86UU1 1377 aa14.37□□□□□ -0.11
COPA-201ENST00000241704 MYOM3Q5VTT5 1437 aa14.36□□□□□ -0.11
COPA-201ENST00000241704 LAMC3Q9Y6N6 1575 aa14.35□□□□□ -0.11
COPA-201ENST00000241704 RSPH6AQ9H0K4 717 aa14.35□□□□□ -0.11
COPA-201ENST00000241704 KIF3BO15066 747 aa14.35□□□□□ -0.11
COPA-201ENST00000241704 CFAP53Q96M91 514 aa14.34□□□□□ -0.11
COPA-201ENST00000241704 FYCO1Q9BQS8 1478 aa14.33□□□□□ -0.11
COPA-201ENST00000241704 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
COPA-201ENST00000241704 ABCA10Q8WWZ4 1543 aa14.33□□□□□ -0.12
COPA-201ENST00000241704 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.12
COPA-201ENST00000241704 DNAJC5BQ9UF47 199 aa14.32□□□□□ -0.12
COPA-201ENST00000241704 ARXQ96QS3 562 aa14.31□□□□□ -0.12
COPA-201ENST00000241704 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
COPA-201ENST00000241704 NCOA2Q15596 1464 aa14.29□□□□□ -0.12
COPA-201ENST00000241704 ROCK2O75116 1388 aaKnown RBP14.29□□□□□ -0.12
COPA-201ENST00000241704 PAK3O75914 559 aaPredicted RBP14.28□□□□□ -0.12
COPA-201ENST00000241704 CC2D1BQ5T0F9 858 aaKnown RBP14.28□□□□□ -0.12
COPA-201ENST00000241704 RRBP1Q9P2E9 1410 aaKnown RBP14.27□□□□□ -0.12
COPA-201ENST00000241704 ZNF644Q9H582 1327 aaPredicted RBP14.27□□□□□ -0.12
COPA-201ENST00000241704 SRPK2P78362 688 aaKnown RBP14.27□□□□□ -0.13
COPA-201ENST00000241704 STK26Q9P289 416 aa14.26□□□□□ -0.13
COPA-201ENST00000241704 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
COPA-201ENST00000241704 WASHC2CQ9Y4E1 1318 aa14.26□□□□□ -0.13
COPA-201ENST00000241704 SNAPC4Q5SXM2 1469 aa14.24□□□□□ -0.13
COPA-201ENST00000241704 SOX12O15370 315 aa14.24□□□□□ -0.13
COPA-201ENST00000241704 SENP3-EIF4A1A0A087X0R7 540 aa14.24□□□□□ -0.13
COPA-201ENST00000241704 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
COPA-201ENST00000241704 NUDCQ9Y266 331 aa14.23□□□□□ -0.13
COPA-201ENST00000241704 EID1Q9Y6B2 187 aa14.23□□□□□ -0.13
COPA-201ENST00000241704 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
COPA-201ENST00000241704 PRG4Q92954 1404 aaPredicted RBP14.23□□□□□ -0.13
COPA-201ENST00000241704 GSE1Q14687 1217 aa14.23□□□□□ -0.13
COPA-201ENST00000241704 FAM69CQ0P6D2 419 aa14.22□□□□□ -0.13
COPA-201ENST00000241704 UACAQ9BZF9 1416 aa14.22□□□□□ -0.13
COPA-201ENST00000241704 CCDC144AA2RUR9 1427 aa14.22□□□□□ -0.13
COPA-201ENST00000241704 VSIG10Q8N0Z9 540 aa14.21□□□□□ -0.13
COPA-201ENST00000241704 MAPK8IP3Q9UPT6 1336 aa14.2□□□□□ -0.14
COPA-201ENST00000241704 KIAA0586Q9BVV6 1533 aa14.2□□□□□ -0.14
COPA-201ENST00000241704 SYNJ2O15056 1496 aa14.19□□□□□ -0.14
COPA-201ENST00000241704 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
COPA-201ENST00000241704 TIAM1Q13009 1591 aa14.19□□□□□ -0.14
COPA-201ENST00000241704 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
COPA-201ENST00000241704 KTN1Q86UP2 1357 aaKnown RBP14.18□□□□□ -0.14
COPA-201ENST00000241704 MYH16Q9H6N6 1097 aa14.18□□□□□ -0.14
COPA-201ENST00000241704 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
COPA-201ENST00000241704 AEBP2Q6ZN18 517 aaPredicted RBP14.18□□□□□ -0.14
COPA-201ENST00000241704 KIF15Q9NS87 1388 aa14.18□□□□□ -0.14
COPA-201ENST00000241704 URB2Q14146 1524 aaKnown RBP14.18□□□□□ -0.14
COPA-201ENST00000241704 HSP90AA1P07900 732 aaKnown RBP14.18□□□□□ -0.14
COPA-201ENST00000241704 RALBP1Q15311 655 aa14.17□□□□□ -0.14
COPA-201ENST00000241704 UPF2Q9HAU5 1272 aaKnown RBP14.17□□□□□ -0.14
COPA-201ENST00000241704 EHBP1L1Q8N3D4 1523 aa14.17□□□□□ -0.14
COPA-201ENST00000241704 EIF3AQ14152 1382 aaKnown RBP14.17□□□□□ -0.14
COPA-201ENST00000241704 NPHP1O15259 732 aa14.16□□□□□ -0.14
COPA-201ENST00000241704 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
COPA-201ENST00000241704 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
COPA-201ENST00000241704 CUL7Q14999 1698 aa14.16□□□□□ -0.14
COPA-201ENST00000241704 MORC1Q86VD1 984 aa14.15□□□□□ -0.14
COPA-201ENST00000241704 ANKRD50Q9ULJ7 1429 aa14.15□□□□□ -0.14
COPA-201ENST00000241704 BRPF3Q9ULD4 1205 aa14.15□□□□□ -0.14
COPA-201ENST00000241704 TROQ12816 1431 aaPredicted RBP14.14□□□□□ -0.15
COPA-201ENST00000241704 L1TD1Q5T7N2 865 aaKnown RBP14.13□□□□□ -0.15
COPA-201ENST00000241704 ST20-MTHFSA0A0A6YYL1 179 aa14.13□□□□□ -0.15
COPA-201ENST00000241704 HSP90AA2PQ14568 343 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms