RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 KDM5BQ9UGL1 1544 aa7.9□□□□□ -1.14
PPFIBP1-201ENST00000228425 TMCO4Q5TGY1 634 aa7.9□□□□□ -1.14
PPFIBP1-201ENST00000228425 TRIM44Q96DX7 344 aaPredicted RBP7.9□□□□□ -1.15
PPFIBP1-201ENST00000228425 CLSTN1O94985 981 aa7.9□□□□□ -1.15
PPFIBP1-201ENST00000228425 ZRSR1Q15695 479 aaKnown RBP7.9□□□□□ -1.15
PPFIBP1-201ENST00000228425 GOLGA3Q08378 1498 aa7.89□□□□□ -1.15
PPFIBP1-201ENST00000228425 CEP162Q5TB80 1403 aa7.89□□□□□ -1.15
PPFIBP1-201ENST00000228425 POLA1P09884 1462 aaPredicted RBP7.89□□□□□ -1.15
PPFIBP1-201ENST00000228425 WRNQ14191 1432 aaPredicted RBP eCLIP7.89□□□□□ -1.15
PPFIBP1-201ENST00000228425 TOPBP1Q92547 1522 aa7.89□□□□□ -1.15
PPFIBP1-201ENST00000228425 APBB1O00213 710 aa7.88□□□□□ -1.15
PPFIBP1-201ENST00000228425 CHGAP10645 457 aaKnown RBP7.88□□□□□ -1.15
PPFIBP1-201ENST00000228425 SOGA1O94964 1423 aa7.88□□□□□ -1.15
PPFIBP1-201ENST00000228425 CLIP1P30622 1438 aa7.88□□□□□ -1.15
PPFIBP1-201ENST00000228425 NCLP19338 710 aaKnown RBP7.88□□□□□ -1.15
PPFIBP1-201ENST00000228425 CEP164Q9UPV0 1460 aa7.87□□□□□ -1.15
PPFIBP1-201ENST00000228425 NPHP1O15259 732 aa7.87□□□□□ -1.15
PPFIBP1-201ENST00000228425 TNNT2P45379 298 aaPredicted RBP7.86□□□□□ -1.15
PPFIBP1-201ENST00000228425 BCCIPQ9P287 314 aaKnown RBP eCLIP7.86□□□□□ -1.15
PPFIBP1-201ENST00000228425 FBXW7Q969H0 707 aa7.86□□□□□ -1.15
PPFIBP1-201ENST00000228425 SNAPC4Q5SXM2 1469 aa7.86□□□□□ -1.15
PPFIBP1-201ENST00000228425 MAGI3Q5TCQ9 1506 aa7.86□□□□□ -1.15
PPFIBP1-201ENST00000228425 E9PSI1 815 aa7.85□□□□□ -1.15
PPFIBP1-201ENST00000228425 ARID3CA6NKF2 412 aa7.85□□□□□ -1.15
PPFIBP1-201ENST00000228425 MYH16Q9H6N6 1097 aa7.85□□□□□ -1.15
PPFIBP1-201ENST00000228425 PPP1R1BQ9UD71 204 aaPredicted RBP7.85□□□□□ -1.15
PPFIBP1-201ENST00000228425 CADPSQ9ULU8 1353 aa7.84□□□□□ -1.15
PPFIBP1-201ENST00000228425 CTTNBP2Q8WZ74 1663 aa7.84□□□□□ -1.15
PPFIBP1-201ENST00000228425 LAS1LQ9Y4W2 734 aaKnown RBP7.84□□□□□ -1.16
PPFIBP1-201ENST00000228425 ADAMTS12P58397 1594 aa7.81□□□□□ -1.16
PPFIBP1-201ENST00000228425 ZMYND15Q9H091 742 aa7.81□□□□□ -1.16
PPFIBP1-201ENST00000228425 FOXD4L5Q5VV16 416 aaPredicted RBP7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 SAMD1Q6SPF0 538 aaPredicted RBP7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 FOXD4L4Q8WXT5 416 aaPredicted RBP7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 CLASP1Q7Z460 1538 aa7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 CFAP43Q8NDM7 1665 aa7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 ZNF592Q92610 1267 aa7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 IGSF3O75054 1194 aa7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 PUS7Q96PZ0 661 aaKnown RBP7.8□□□□□ -1.16
PPFIBP1-201ENST00000228425 BCL11BQ9C0K0 894 aaPredicted RBP7.79□□□□□ -1.16
PPFIBP1-201ENST00000228425 EIF4G3O43432 1585 aaKnown RBP7.79□□□□□ -1.16
PPFIBP1-201ENST00000228425 OSCARQ8IYS5 282 aa7.79□□□□□ -1.16
PPFIBP1-201ENST00000228425 TRHP20396 242 aaPredicted RBP7.78□□□□□ -1.16
PPFIBP1-201ENST00000228425 GOLGA2Q08379 1002 aa7.78□□□□□ -1.16
PPFIBP1-201ENST00000228425 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
PPFIBP1-201ENST00000228425 IRX6P78412 446 aaPredicted RBP7.78□□□□□ -1.16
PPFIBP1-201ENST00000228425 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.16
PPFIBP1-201ENST00000228425 GOLGA6L6A8MZA4 724 aa7.77□□□□□ -1.17
PPFIBP1-201ENST00000228425 MRC2Q9UBG0 1479 aa7.76□□□□□ -1.17
PPFIBP1-201ENST00000228425 PTMAP06454 111 aaKnown RBP7.76□□□□□ -1.17
PPFIBP1-201ENST00000228425 PLCD4Q9BRC7 762 aa7.76□□□□□ -1.17
PPFIBP1-201ENST00000228425 DISP1Q96F81 1524 aa7.75□□□□□ -1.17
PPFIBP1-201ENST00000228425 SIGLEC1Q9BZZ2 1709 aa7.75□□□□□ -1.17
PPFIBP1-201ENST00000228425 ZNF777Q9ULD5 760 aaPredicted RBP7.75□□□□□ -1.17
PPFIBP1-201ENST00000228425 L1TD1Q5T7N2 865 aaKnown RBP7.75□□□□□ -1.17
PPFIBP1-201ENST00000228425 KIF27Q86VH2 1401 aa7.75□□□□□ -1.17
PPFIBP1-201ENST00000228425 ANP32EQ9BTT0 268 aa7.75□□□□□ -1.17
PPFIBP1-201ENST00000228425 RAPGEF2Q9Y4G8 1499 aa7.74□□□□□ -1.17
PPFIBP1-201ENST00000228425 CEP170Q5SW79 1584 aa7.74□□□□□ -1.17
PPFIBP1-201ENST00000228425 GOLGA6L22H0YM25 854 aa7.74□□□□□ -1.17
PPFIBP1-201ENST00000228425 LMOD2Q6P5Q4 547 aa7.74□□□□□ -1.17
PPFIBP1-201ENST00000228425 GZF1Q9H116 711 aaPredicted RBP7.74□□□□□ -1.17
PPFIBP1-201ENST00000228425 MIER1Q8N108 512 aa7.74□□□□□ -1.17
PPFIBP1-201ENST00000228425 DNTTIP2Q5QJE6 756 aaKnown RBP7.74□□□□□ -1.17
PPFIBP1-201ENST00000228425 CUL7Q14999 1698 aa7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 VPS8Q8N3P4 1428 aa7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 TONSLQ96HA7 1378 aa7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 CIZ1Q9ULV3 898 aaPredicted RBP7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 MAP3K1Q13233 1512 aa7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 ISY1Q9ULR0 285 aaKnown RBP7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 ZNF608Q9ULD9 1512 aaPredicted RBP7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 FGD5Q6ZNL6 1462 aa7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 FANCD2Q9BXW9 1451 aa7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 IGF1RP08069 1367 aa7.73□□□□□ -1.17
PPFIBP1-201ENST00000228425 MTMR7Q9Y216 660 aa7.72□□□□□ -1.17
PPFIBP1-201ENST00000228425 ADCY10Q96PN6 1610 aa7.72□□□□□ -1.17
PPFIBP1-201ENST00000228425 VASPP50552 380 aaPredicted RBP7.72□□□□□ -1.17
PPFIBP1-201ENST00000228425 CWC22Q9HCG8 908 aaKnown RBP7.71□□□□□ -1.17
PPFIBP1-201ENST00000228425 CARMIL2Q6F5E8 1435 aa7.71□□□□□ -1.17
PPFIBP1-201ENST00000228425 CCDC97Q96F63 343 aaPredicted RBP7.71□□□□□ -1.17
PPFIBP1-201ENST00000228425 NRDCO43847 1150 aa7.71□□□□□ -1.18
PPFIBP1-201ENST00000228425 NOL8Q76FK4 1167 aaKnown RBP7.71□□□□□ -1.18
PPFIBP1-201ENST00000228425 ARHGAP35Q9NRY4 1499 aa7.71□□□□□ -1.18
PPFIBP1-201ENST00000228425 CASC1Q6TDU7 716 aa7.71□□□□□ -1.18
PPFIBP1-201ENST00000228425 KIAA2012Q0VF49 1180 aa7.7□□□□□ -1.18
PPFIBP1-201ENST00000228425 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
PPFIBP1-201ENST00000228425 WDR43Q15061 677 aaKnown RBP eCLIP7.7□□□□□ -1.18
PPFIBP1-201ENST00000228425 PPRC1Q5VV67 1664 aaKnown RBP7.7□□□□□ -1.18
PPFIBP1-201ENST00000228425 NUP160Q12769 1436 aa7.69□□□□□ -1.18
PPFIBP1-201ENST00000228425 TICAM2Q86XR7 235 aa7.69□□□□□ -1.18
PPFIBP1-201ENST00000228425 HMGB1P1B2RPK0 211 aaPredicted RBP7.69□□□□□ -1.18
PPFIBP1-201ENST00000228425 NOC3LQ8WTT2 800 aaKnown RBP7.69□□□□□ -1.18
PPFIBP1-201ENST00000228425 P3H3Q8IVL6 736 aa7.68□□□□□ -1.18
PPFIBP1-201ENST00000228425 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
PPFIBP1-201ENST00000228425 PPP1R15AO75807 674 aaPredicted RBP7.68□□□□□ -1.18
PPFIBP1-201ENST00000228425 ABCA8O94911 1581 aa7.68□□□□□ -1.18
PPFIBP1-201ENST00000228425 ERCC6L2Q5T890 1561 aa7.68□□□□□ -1.18
PPFIBP1-201ENST00000228425 CHAF1AQ13111 956 aaPredicted RBP7.68□□□□□ -1.18
PPFIBP1-201ENST00000228425 PPP6R1Q9UPN7 881 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms