RNA–Protein interactions for RNA: ENST00000223122.3

C1GALT1-201, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1GALT1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-201ENST00000223122 SMARCA2P51531 1590 aa10.49□□□□□ -0.73
C1GALT1-201ENST00000223122 RCAN3Q9UKA8 241 aa10.49□□□□□ -0.73
C1GALT1-201ENST00000223122 MORC1Q86VD1 984 aa10.48□□□□□ -0.73
C1GALT1-201ENST00000223122 PLCB2Q00722 1185 aa10.48□□□□□ -0.73
C1GALT1-201ENST00000223122 ERICH6BQ5W0A0 696 aa10.47□□□□□ -0.73
C1GALT1-201ENST00000223122 SOX12O15370 315 aa10.47□□□□□ -0.73
C1GALT1-201ENST00000223122 HSCBQ8IWL3 235 aa10.47□□□□□ -0.73
C1GALT1-201ENST00000223122 TDRD9Q8NDG6 1382 aaKnown RBP10.46□□□□□ -0.73
C1GALT1-201ENST00000223122 SRPK2P78362 688 aaKnown RBP10.46□□□□□ -0.74
C1GALT1-201ENST00000223122 L3MBTL2Q969R5 705 aa10.46□□□□□ -0.74
C1GALT1-201ENST00000223122 CCDC146Q8IYE0 955 aa10.45□□□□□ -0.74
C1GALT1-201ENST00000223122 KANK1Q14678 1352 aa10.45□□□□□ -0.74
C1GALT1-201ENST00000223122 STK26Q9P289 416 aa10.45□□□□□ -0.74
C1GALT1-201ENST00000223122 NUP155O75694 1391 aa10.44□□□□□ -0.74
C1GALT1-201ENST00000223122 FMN1Q68DA7 1419 aa10.44□□□□□ -0.74
C1GALT1-201ENST00000223122 SMARCA4P51532 1647 aa10.44□□□□□ -0.74
C1GALT1-201ENST00000223122 APBB1O00213 710 aa10.43□□□□□ -0.74
C1GALT1-201ENST00000223122 OS9Q13438 667 aaPredicted RBP10.43□□□□□ -0.74
C1GALT1-201ENST00000223122 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
C1GALT1-201ENST00000223122 SLKQ9H2G2 1235 aaPredicted RBP10.43□□□□□ -0.74
C1GALT1-201ENST00000223122 GZF1Q9H116 711 aaPredicted RBP10.42□□□□□ -0.74
C1GALT1-201ENST00000223122 MS4A1P11836 297 aa10.42□□□□□ -0.74
C1GALT1-201ENST00000223122 RALBP1Q15311 655 aa10.42□□□□□ -0.74
C1GALT1-201ENST00000223122 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.41□□□□□ -0.74
C1GALT1-201ENST00000223122 HNRNPMP52272 730 aaKnown RBP eCLIP10.41□□□□□ -0.74
C1GALT1-201ENST00000223122 MLECQ14165 292 aa10.41□□□□□ -0.74
C1GALT1-201ENST00000223122 ZRSR1Q15695 479 aaKnown RBP10.4□□□□□ -0.74
C1GALT1-201ENST00000223122 ITPRIPQ8IWB1 547 aa10.4□□□□□ -0.74
C1GALT1-201ENST00000223122 IPO9Q96P70 1041 aaKnown RBP10.4□□□□□ -0.74
C1GALT1-201ENST00000223122 TCERG1O14776 1098 aaKnown RBP10.4□□□□□ -0.75
C1GALT1-201ENST00000223122 PNNQ9H307 717 aaKnown RBP10.4□□□□□ -0.75
C1GALT1-201ENST00000223122 NAP1L2Q9ULW6 460 aaPredicted RBP10.4□□□□□ -0.75
C1GALT1-201ENST00000223122 GGT6Q6P531 493 aa10.39□□□□□ -0.75
C1GALT1-201ENST00000223122 ANKRD30AQ9BXX3 1397 aa10.39□□□□□ -0.75
C1GALT1-201ENST00000223122 HAP1P54257 671 aaPredicted RBP10.39□□□□□ -0.75
C1GALT1-201ENST00000223122 L1TD1Q5T7N2 865 aaKnown RBP10.38□□□□□ -0.75
C1GALT1-201ENST00000223122 NUTM2DQ5VT03 806 aaPredicted RBP10.38□□□□□ -0.75
C1GALT1-201ENST00000223122 PLIN1O60240 522 aa10.38□□□□□ -0.75
C1GALT1-201ENST00000223122 U2AF1L5P0DN76 240 aaPredicted RBP10.38□□□□□ -0.75
C1GALT1-201ENST00000223122 U2AF1Q01081 240 aaKnown RBP eCLIP10.38□□□□□ -0.75
C1GALT1-201ENST00000223122 CHMP4BQ9H444 224 aaKnown RBP10.38□□□□□ -0.75
C1GALT1-201ENST00000223122 KCNJ4P48050 445 aa10.37□□□□□ -0.75
C1GALT1-201ENST00000223122 MFAP1P55081 439 aaKnown RBP10.37□□□□□ -0.75
C1GALT1-201ENST00000223122 FOXD4L1Q9NU39 408 aa10.36□□□□□ -0.75
C1GALT1-201ENST00000223122 CCDC18Q5T9S5 1454 aa10.36□□□□□ -0.75
C1GALT1-201ENST00000223122 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
C1GALT1-201ENST00000223122 SLC4A3P48751 1232 aa10.35□□□□□ -0.75
C1GALT1-201ENST00000223122 MSNP26038 577 aaKnown RBP10.35□□□□□ -0.75
C1GALT1-201ENST00000223122 FGD1P98174 961 aa10.35□□□□□ -0.75
C1GALT1-201ENST00000223122 CARMIL2Q6F5E8 1435 aa10.35□□□□□ -0.75
C1GALT1-201ENST00000223122 TULP1O00294 542 aaPredicted RBP10.34□□□□□ -0.75
C1GALT1-201ENST00000223122 RWDD1Q9H446 243 aaPredicted RBP10.34□□□□□ -0.75
C1GALT1-201ENST00000223122 KIF15Q9NS87 1388 aa10.34□□□□□ -0.75
C1GALT1-201ENST00000223122 CDK11BP21127 795 aaKnown RBP10.34□□□□□ -0.75
C1GALT1-201ENST00000223122 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
C1GALT1-201ENST00000223122 EXOC6Q8TAG9 804 aa10.34□□□□□ -0.75
C1GALT1-201ENST00000223122 ARID3AQ99856 593 aa10.34□□□□□ -0.75
C1GALT1-201ENST00000223122 RRP7AQ9Y3A4 280 aaKnown RBP10.33□□□□□ -0.76
C1GALT1-201ENST00000223122 ATAD2BQ9ULI0 1458 aa10.33□□□□□ -0.76
C1GALT1-201ENST00000223122 HDGFL2Q7Z4V5 671 aaPredicted RBP10.33□□□□□ -0.76
C1GALT1-201ENST00000223122 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
C1GALT1-201ENST00000223122 MYBBP1AQ9BQG0 1328 aaKnown RBP10.32□□□□□ -0.76
C1GALT1-201ENST00000223122 SMC4Q9NTJ3 1288 aa10.32□□□□□ -0.76
C1GALT1-201ENST00000223122 MCCP23508 829 aa10.32□□□□□ -0.76
C1GALT1-201ENST00000223122 PANK3Q9H999 370 aa10.32□□□□□ -0.76
C1GALT1-201ENST00000223122 PDS5BQ9NTI5 1447 aa10.32□□□□□ -0.76
C1GALT1-201ENST00000223122 PMFBP1Q8TBY8 1022 aa10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 RTF1Q92541 710 aaKnown RBP10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 CRBNQ96SW2 442 aa10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 IPO8O15397 1037 aaKnown RBP10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 NLRP13Q86W25 1043 aa10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 PRKRIP1Q9H875 184 aaPredicted RBP10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 EIF3AQ14152 1382 aaKnown RBP10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 KIF21BO75037 1637 aa10.31□□□□□ -0.76
C1GALT1-201ENST00000223122 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
C1GALT1-201ENST00000223122 DRC7Q8IY82 874 aa10.3□□□□□ -0.76
C1GALT1-201ENST00000223122 GOLGA6L4A6NEF3 574 aa10.3□□□□□ -0.76
C1GALT1-201ENST00000223122 RRP1P56182 461 aaKnown RBP10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 KIF3BO15066 747 aa10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 NOL8Q76FK4 1167 aaKnown RBP10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 GBP4Q96PP9 640 aa10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 CADPSQ9ULU8 1353 aa10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 PDE4AP27815 886 aa10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 BCL2L13Q9BXK5 485 aa10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 USP47Q96K76 1375 aa10.29□□□□□ -0.76
C1GALT1-201ENST00000223122 GOLGA6L6A8MZA4 724 aa10.28□□□□□ -0.76
C1GALT1-201ENST00000223122 ZBED9Q6R2W3 1325 aa10.28□□□□□ -0.76
C1GALT1-201ENST00000223122 GOLGA6L3A6NEY3 463 aa10.27□□□□□ -0.76
C1GALT1-201ENST00000223122 PAK3O75914 559 aaPredicted RBP10.27□□□□□ -0.77
C1GALT1-201ENST00000223122 TRAK1Q9UPV9 953 aa10.27□□□□□ -0.77
C1GALT1-201ENST00000223122 FOXD4L5Q5VV16 416 aaPredicted RBP10.26□□□□□ -0.77
C1GALT1-201ENST00000223122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.26□□□□□ -0.77
C1GALT1-201ENST00000223122 FOXD4L4Q8WXT5 416 aaPredicted RBP10.26□□□□□ -0.77
C1GALT1-201ENST00000223122 PRDM2Q13029 1718 aa10.26□□□□□ -0.77
C1GALT1-201ENST00000223122 PDE3BQ13370 1112 aa10.26□□□□□ -0.77
C1GALT1-201ENST00000223122 EFCAB2Q5VUJ9 269 aa10.25□□□□□ -0.77
C1GALT1-201ENST00000223122 CCDC144AA2RUR9 1427 aa10.25□□□□□ -0.77
C1GALT1-201ENST00000223122 FANCD2Q9BXW9 1451 aa10.25□□□□□ -0.77
C1GALT1-201ENST00000223122 CHAF1AQ13111 956 aaPredicted RBP10.25□□□□□ -0.77
C1GALT1-201ENST00000223122 SLC4A10Q6U841 1118 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms