RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 KDM2AQ9Y2K7 1162 aa16.87■□□□□ 0.29
MARK3-201ENST00000216288 KIF7Q2M1P5 1343 aa16.86■□□□□ 0.29
MARK3-201ENST00000216288 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
MARK3-201ENST00000216288 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
MARK3-201ENST00000216288 CFDP1Q9UEE9 299 aaPredicted RBP16.84■□□□□ 0.29
MARK3-201ENST00000216288 CCDC7Q96M83 1385 aa16.84■□□□□ 0.29
MARK3-201ENST00000216288 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.29
MARK3-201ENST00000216288 SALL2Q9Y467 1007 aaPredicted RBP16.83■□□□□ 0.29
MARK3-201ENST00000216288 PKD2Q13563 968 aa16.81■□□□□ 0.28
MARK3-201ENST00000216288 PRG4Q92954 1404 aaPredicted RBP16.81■□□□□ 0.28
MARK3-201ENST00000216288 CNTLNQ9NXG0 1405 aa16.8■□□□□ 0.28
MARK3-201ENST00000216288 ANKRD30BQ9BXX2 1392 aa16.8■□□□□ 0.28
MARK3-201ENST00000216288 ABCC5O15440 1437 aa16.79■□□□□ 0.28
MARK3-201ENST00000216288 DAPK1P53355 1430 aa16.78■□□□□ 0.28
MARK3-201ENST00000216288 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
MARK3-201ENST00000216288 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
MARK3-201ENST00000216288 ARHGEF11O15085 1522 aa16.76■□□□□ 0.27
MARK3-201ENST00000216288 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
MARK3-201ENST00000216288 TCOF1Q13428 1488 aaKnown RBP16.74■□□□□ 0.27
MARK3-201ENST00000216288 HECW1Q76N89 1606 aa16.74■□□□□ 0.27
MARK3-201ENST00000216288 NCOA1Q15788 1441 aa16.74■□□□□ 0.27
MARK3-201ENST00000216288 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
MARK3-201ENST00000216288 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
MARK3-201ENST00000216288 PLB1Q6P1J6 1458 aa16.71■□□□□ 0.27
MARK3-201ENST00000216288 AKNAQ7Z591 1439 aa16.71■□□□□ 0.27
MARK3-201ENST00000216288 MIA2Q96PC5 1412 aa16.71■□□□□ 0.27
MARK3-201ENST00000216288 RGL3Q3MIN7 710 aa16.71■□□□□ 0.27
MARK3-201ENST00000216288 WDR62O43379 1518 aa16.71■□□□□ 0.26
MARK3-201ENST00000216288 NUP153P49790 1475 aaKnown RBP16.7■□□□□ 0.26
MARK3-201ENST00000216288 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
MARK3-201ENST00000216288 HNRNPMP52272 730 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■■■■■ 29.2
MARK3-201ENST00000216288 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
MARK3-201ENST00000216288 USP47Q96K76 1375 aa16.68■□□□□ 0.26
MARK3-201ENST00000216288 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
MARK3-201ENST00000216288 TEX14Q8IWB6 1497 aa16.67■□□□□ 0.26
MARK3-201ENST00000216288 ZBED9Q6R2W3 1325 aa16.67■□□□□ 0.26
MARK3-201ENST00000216288 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■■□□ 19.1
MARK3-201ENST00000216288 DISP1Q96F81 1524 aa16.67■□□□□ 0.26
MARK3-201ENST00000216288 ST20-MTHFSA0A0A6YYL1 179 aa16.66■□□□□ 0.26
MARK3-201ENST00000216288 TMC1Q8TDI8 760 aa16.66■□□□□ 0.26
MARK3-201ENST00000216288 NUP155O75694 1391 aa16.66■□□□□ 0.26
MARK3-201ENST00000216288 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
MARK3-201ENST00000216288 PBRM1Q86U86 1689 aa16.65■□□□□ 0.26
MARK3-201ENST00000216288 GCC2Q8IWJ2 1684 aa16.65■□□□□ 0.26
MARK3-201ENST00000216288 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
MARK3-201ENST00000216288 SPATA31E1Q6ZUB1 1445 aa16.63■□□□□ 0.25
MARK3-201ENST00000216288 PZPP20742 1482 aa16.62■□□□□ 0.25
MARK3-201ENST00000216288 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
MARK3-201ENST00000216288 PLEKHD1A6NEE1 506 aa16.62■□□□□ 0.25
MARK3-201ENST00000216288 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
MARK3-201ENST00000216288 ROCK1Q13464 1354 aa16.6■□□□□ 0.25
MARK3-201ENST00000216288 CCDC136Q96JN2 1154 aa16.6■□□□□ 0.25
MARK3-201ENST00000216288 NBR1Q14596 966 aa16.59■□□□□ 0.25
MARK3-201ENST00000216288 DHX29Q7Z478 1369 aaKnown RBP16.59■□□□□ 0.25
MARK3-201ENST00000216288 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
MARK3-201ENST00000216288 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
MARK3-201ENST00000216288 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
MARK3-201ENST00000216288 KIAA0586Q9BVV6 1533 aa16.59■□□□□ 0.25
MARK3-201ENST00000216288 GPATCH8Q9UKJ3 1502 aaKnown RBP16.57■□□□□ 0.24
MARK3-201ENST00000216288 ANKRD50Q9ULJ7 1429 aa16.57■□□□□ 0.24
MARK3-201ENST00000216288 KIAA0556O60303 1618 aa16.57■□□□□ 0.24
MARK3-201ENST00000216288 TROQ12816 1431 aaPredicted RBP16.57■□□□□ 0.24
MARK3-201ENST00000216288 NBPF1Q3BBV0 1214 aa16.56■□□□□ 0.24
MARK3-201ENST00000216288 KIF14Q15058 1648 aa16.56■□□□□ 0.24
MARK3-201ENST00000216288 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
MARK3-201ENST00000216288 KIAA1107Q9UPP5 1409 aa16.56■□□□□ 0.24
MARK3-201ENST00000216288 DNMT1P26358 1616 aaKnown RBP16.55■□□□□ 0.24
MARK3-201ENST00000216288 ANKRD30AQ9BXX3 1397 aa16.55■□□□□ 0.24
MARK3-201ENST00000216288 PAK3O75914 559 aaPredicted RBP16.55■□□□□ 0.24
MARK3-201ENST00000216288 CC2D1BQ5T0F9 858 aaKnown RBP16.55■□□□□ 0.24
MARK3-201ENST00000216288 PNISRQ8TF01 805 aaKnown RBP16.55■□□□□ 0.24
MARK3-201ENST00000216288 NUDCQ9Y266 331 aa16.55■□□□□ 0.24
MARK3-201ENST00000216288 FANCIQ9NVI1 1328 aa16.54■□□□□ 0.24
MARK3-201ENST00000216288 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
MARK3-201ENST00000216288 ERCC6Q03468 1493 aa16.53■□□□□ 0.24
MARK3-201ENST00000216288 RAPGEF6Q8TEU7 1601 aa16.53■□□□□ 0.24
MARK3-201ENST00000216288 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
MARK3-201ENST00000216288 BCORL1Q5H9F3 1711 aa16.53■□□□□ 0.24
MARK3-201ENST00000216288 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
MARK3-201ENST00000216288 CDCA7LQ96GN5 454 aa16.5■□□□□ 0.23
MARK3-201ENST00000216288 PLIN1O60240 522 aa16.49■□□□□ 0.23
MARK3-201ENST00000216288 ROCK2O75116 1388 aaKnown RBP16.48■□□□□ 0.23
MARK3-201ENST00000216288 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
MARK3-201ENST00000216288 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
MARK3-201ENST00000216288 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
MARK3-201ENST00000216288 ERICH6BQ5W0A0 696 aa16.46■□□□□ 0.22
MARK3-201ENST00000216288 EIF4G3O43432 1585 aaKnown RBP16.45■□□□□ 0.22
MARK3-201ENST00000216288 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
MARK3-201ENST00000216288 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
MARK3-201ENST00000216288 CARMIL2Q6F5E8 1435 aa16.43■□□□□ 0.22
MARK3-201ENST00000216288 ATP10BO94823 1461 aa16.42■□□□□ 0.22
MARK3-201ENST00000216288 MBD5Q9P267 1494 aa16.41■□□□□ 0.22
MARK3-201ENST00000216288 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
MARK3-201ENST00000216288 MYBBP1AQ9BQG0 1328 aaKnown RBP16.4■□□□□ 0.22
MARK3-201ENST00000216288 PANK3Q9H999 370 aa16.39■□□□□ 0.21
MARK3-201ENST00000216288 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
MARK3-201ENST00000216288 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
MARK3-201ENST00000216288 KDM5CP41229 1560 aa16.37■□□□□ 0.21
MARK3-201ENST00000216288 RRP1P56182 461 aaKnown RBP16.36■□□□□ 0.21
MARK3-201ENST00000216288 SYNJ2O15056 1496 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms