RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 ZNF777Q9ULD5 760 aaPredicted RBP24.03■■□□□ 1.44
SNRPD3-201ENST00000215829 ABCA9Q8IUA7 1624 aa24.03■■□□□ 1.44
SNRPD3-201ENST00000215829 PLCH2O75038 1416 aa24.02■■□□□ 1.44
SNRPD3-201ENST00000215829 CAMSAP2Q08AD1 1489 aa24.02■■□□□ 1.44
SNRPD3-201ENST00000215829 ARHGAP5Q13017 1502 aa23.99■■□□□ 1.43
SNRPD3-201ENST00000215829 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
SNRPD3-201ENST00000215829 ARAP3Q8WWN8 1544 aa23.97■■□□□ 1.43
SNRPD3-201ENST00000215829 PTPRKQ15262 1439 aa23.97■■□□□ 1.43
SNRPD3-201ENST00000215829 EFCAB2Q5VUJ9 269 aa23.95■■□□□ 1.42
SNRPD3-201ENST00000215829 DNMT1P26358 1616 aaKnown RBP23.94■■□□□ 1.42
SNRPD3-201ENST00000215829 SAMD9LQ8IVG5 1584 aa23.94■■□□□ 1.42
SNRPD3-201ENST00000215829 ABCC5O15440 1437 aa23.93■■□□□ 1.42
SNRPD3-201ENST00000215829 DAPK1P53355 1430 aa23.93■■□□□ 1.42
SNRPD3-201ENST00000215829 CD109Q6YHK3 1445 aa23.9■■□□□ 1.42
SNRPD3-201ENST00000215829 PLEKHH2Q8IVE3 1493 aa23.89■■□□□ 1.42
SNRPD3-201ENST00000215829 GLI2P10070 1586 aa23.89■■□□□ 1.41
SNRPD3-201ENST00000215829 KIAA1107Q9UPP5 1409 aa23.88■■□□□ 1.41
SNRPD3-201ENST00000215829 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
SNRPD3-201ENST00000215829 MBD5Q9P267 1494 aa23.87■■□□□ 1.41
SNRPD3-201ENST00000215829 RSPH4AQ5TD94 716 aa23.87■■□□□ 1.41
SNRPD3-201ENST00000215829 ARHGEF5Q12774 1597 aa23.86■■□□□ 1.41
SNRPD3-201ENST00000215829 FANCAO15360 1455 aa23.86■■□□□ 1.41
SNRPD3-201ENST00000215829 CHIC2Q9UKJ5 165 aa23.86■■□□□ 1.41
SNRPD3-201ENST00000215829 SETD5Q9C0A6 1442 aa23.85■■□□□ 1.41
SNRPD3-201ENST00000215829 DIP2BQ9P265 1576 aa23.84■■□□□ 1.41
SNRPD3-201ENST00000215829 AKNAQ7Z591 1439 aa23.83■■□□□ 1.41
SNRPD3-201ENST00000215829 SYCP2Q9BX26 1530 aa23.83■■□□□ 1.41
SNRPD3-201ENST00000215829 CROCC2H7BZ55 1655 aa23.83■■□□□ 1.41
SNRPD3-201ENST00000215829 FAM69CQ0P6D2 419 aa23.83■■□□□ 1.4
SNRPD3-201ENST00000215829 HFM1A2PYH4 1435 aa23.82■■□□□ 1.4
SNRPD3-201ENST00000215829 ROCK1Q13464 1354 aa23.82■■□□□ 1.4
SNRPD3-201ENST00000215829 ABCC1P33527 1531 aa23.82■■□□□ 1.4
SNRPD3-201ENST00000215829 MAP3K4Q9Y6R4 1608 aa23.82■■□□□ 1.4
SNRPD3-201ENST00000215829 ARHGEF12Q9NZN5 1544 aa23.81■■□□□ 1.4
SNRPD3-201ENST00000215829 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
SNRPD3-201ENST00000215829 TSPY4P0CV99 314 aa23.8■■□□□ 1.4
SNRPD3-201ENST00000215829 TSPY10P0CW01 314 aa23.8■■□□□ 1.4
SNRPD3-201ENST00000215829 SHANK2Q9UPX8 1470 aa23.8■■□□□ 1.4
SNRPD3-201ENST00000215829 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
SNRPD3-201ENST00000215829 NAIPQ13075 1403 aa23.79■■□□□ 1.4
SNRPD3-201ENST00000215829 RRP7BPQ9NSQ0 103 aa23.78■■□□□ 1.4
SNRPD3-201ENST00000215829 HRCP23327 699 aa23.78■■□□□ 1.4
SNRPD3-201ENST00000215829 CFAP74Q9C0B2 1584 aa23.77■■□□□ 1.4
SNRPD3-201ENST00000215829 ADGRL2O95490 1459 aa23.76■■□□□ 1.39
SNRPD3-201ENST00000215829 C9orf84Q5VXU9 1444 aa23.76■■□□□ 1.39
SNRPD3-201ENST00000215829 ADGBQ8N7X0 1667 aa23.75■■□□□ 1.39
SNRPD3-201ENST00000215829 NCOA1Q15788 1441 aa23.75■■□□□ 1.39
SNRPD3-201ENST00000215829 ADGRL1O94910 1474 aa23.74■■□□□ 1.39
SNRPD3-201ENST00000215829 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
SNRPD3-201ENST00000215829 NEO1Q92859 1461 aa23.73■■□□□ 1.39
SNRPD3-201ENST00000215829 GCC2Q8IWJ2 1684 aa23.73■■□□□ 1.39
SNRPD3-201ENST00000215829 TRAPPC8Q9Y2L5 1435 aa23.73■■□□□ 1.39
SNRPD3-201ENST00000215829 SCAPERQ9BY12 1400 aa23.72■■□□□ 1.39
SNRPD3-201ENST00000215829 MAST1Q9Y2H9 1570 aa23.71■■□□□ 1.39
SNRPD3-201ENST00000215829 KIF13AQ9H1H9 1805 aa23.71■■□□□ 1.39
SNRPD3-201ENST00000215829 CCER1Q8TC90 406 aaPredicted RBP23.7■■□□□ 1.38
SNRPD3-201ENST00000215829 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
SNRPD3-201ENST00000215829 PPRC1Q5VV67 1664 aaKnown RBP23.64■■□□□ 1.38
SNRPD3-201ENST00000215829 TSPOAP1O95153 1857 aa23.64■■□□□ 1.38
SNRPD3-201ENST00000215829 SPAG9O60271 1321 aaKnown RBP23.63■■□□□ 1.37
SNRPD3-201ENST00000215829 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
SNRPD3-201ENST00000215829 TEX14Q8IWB6 1497 aa23.63■■□□□ 1.37
SNRPD3-201ENST00000215829 KDM6BO15054 1643 aa23.62■■□□□ 1.37
SNRPD3-201ENST00000215829 DHX57Q6P158 1386 aaKnown RBP23.62■■□□□ 1.37
SNRPD3-201ENST00000215829 KIF15Q9NS87 1388 aa23.62■■□□□ 1.37
SNRPD3-201ENST00000215829 ZNF518AQ6AHZ1 1483 aa23.61■■□□□ 1.37
SNRPD3-201ENST00000215829 PLXNC1O60486 1568 aa23.61■■□□□ 1.37
SNRPD3-201ENST00000215829 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
SNRPD3-201ENST00000215829 POGZQ7Z3K3 1410 aa23.6■■□□□ 1.37
SNRPD3-201ENST00000215829 DENND4BO75064 1496 aaPredicted RBP23.59■■□□□ 1.37
SNRPD3-201ENST00000215829 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
SNRPD3-201ENST00000215829 ZFYVE16Q7Z3T8 1539 aa23.58■■□□□ 1.36
SNRPD3-201ENST00000215829 INO80Q9ULG1 1556 aaPredicted RBP23.56■■□□□ 1.36
SNRPD3-201ENST00000215829 KDM5CP41229 1560 aa23.56■■□□□ 1.36
SNRPD3-201ENST00000215829 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
SNRPD3-201ENST00000215829 RAPGEF3O95398 923 aa23.53■■□□□ 1.36
SNRPD3-201ENST00000215829 DUOX2Q9NRD8 1548 aa23.53■■□□□ 1.36
SNRPD3-201ENST00000215829 TRIM52Q96A61 297 aa23.52■■□□□ 1.36
SNRPD3-201ENST00000215829 MYT1LQ9UL68 1186 aa23.52■■□□□ 1.36
SNRPD3-201ENST00000215829 RICTORQ6R327 1708 aa23.51■■□□□ 1.35
SNRPD3-201ENST00000215829 MLH3Q9UHC1 1453 aa23.51■■□□□ 1.35
SNRPD3-201ENST00000215829 KIDINS220Q9ULH0 1771 aa23.5■■□□□ 1.35
SNRPD3-201ENST00000215829 CLSPNQ9HAW4 1339 aa23.5■■□□□ 1.35
SNRPD3-201ENST00000215829 ZEB1P37275 1124 aaPredicted RBP23.5■■□□□ 1.35
SNRPD3-201ENST00000215829 TRHP20396 242 aaPredicted RBP23.49■■□□□ 1.35
SNRPD3-201ENST00000215829 HECW2Q9P2P5 1572 aa23.48■■□□□ 1.35
SNRPD3-201ENST00000215829 ERBINQ96RT1 1412 aa23.47■■□□□ 1.35
SNRPD3-201ENST00000215829 FRMPD1Q5SYB0 1578 aa23.45■■□□□ 1.34
SNRPD3-201ENST00000215829 DHX29Q7Z478 1369 aaKnown RBP23.43■■□□□ 1.34
SNRPD3-201ENST00000215829 MPHOSPH9Q99550 1183 aa23.42■■□□□ 1.34
SNRPD3-201ENST00000215829 ZMYM4Q5VZL5 1548 aa23.41■■□□□ 1.34
SNRPD3-201ENST00000215829 COL17A1Q9UMD9 1497 aaPredicted RBP23.4■■□□□ 1.34
SNRPD3-201ENST00000215829 NUP155O75694 1391 aa23.39■■□□□ 1.33
SNRPD3-201ENST00000215829 KDM5DQ9BY66 1539 aa23.38■■□□□ 1.33
SNRPD3-201ENST00000215829 ABCA6Q8N139 1617 aa23.38■■□□□ 1.33
SNRPD3-201ENST00000215829 A2MP01023 1474 aa23.38■■□□□ 1.33
SNRPD3-201ENST00000215829 PZPP20742 1482 aa23.38■■□□□ 1.33
SNRPD3-201ENST00000215829 MAGI2Q86UL8 1455 aa23.38■■□□□ 1.33
SNRPD3-201ENST00000215829 UNC13BO14795 1591 aa23.37■■□□□ 1.33
SNRPD3-201ENST00000215829 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms