RNA–Protein interactions for RNA: ENST00000205636.3

CMTM6-201, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM6, Length 3,863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-201ENST00000205636 PLCD3Q8N3E9 789 aa19.09■□□□□ 0.65
CMTM6-201ENST00000205636 TPM2P07951 284 aa19.08■□□□□ 0.65
CMTM6-201ENST00000205636 RSPH4AQ5TD94 716 aa19.07■□□□□ 0.64
CMTM6-201ENST00000205636 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
CMTM6-201ENST00000205636 MYH16Q9H6N6 1097 aa19.07■□□□□ 0.64
CMTM6-201ENST00000205636 CALD1Q05682 793 aaKnown RBP19.06■□□□□ 0.64
CMTM6-201ENST00000205636 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
CMTM6-201ENST00000205636 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
CMTM6-201ENST00000205636 RRP1P56182 461 aaKnown RBP19.02■□□□□ 0.64
CMTM6-201ENST00000205636 ANP32BQ92688 251 aaKnown RBP19.02■□□□□ 0.64
CMTM6-201ENST00000205636 ZFP91Q96JP5 570 aaPredicted RBP19.02■□□□□ 0.64
CMTM6-201ENST00000205636 FAM13BQ9NYF5 915 aa19.02■□□□□ 0.64
CMTM6-201ENST00000205636 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
CMTM6-201ENST00000205636 IPO4Q8TEX9 1081 aaKnown RBP19■□□□□ 0.63
CMTM6-201ENST00000205636 CDK11BP21127 795 aaKnown RBP19■□□□□ 0.63
CMTM6-201ENST00000205636 ESPNB1AK53 854 aa18.99■□□□□ 0.63
CMTM6-201ENST00000205636 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
CMTM6-201ENST00000205636 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
CMTM6-201ENST00000205636 SKAP1Q86WV1 359 aa18.96■□□□□ 0.63
CMTM6-201ENST00000205636 FAM161AQ3B820 660 aa18.96■□□□□ 0.63
CMTM6-201ENST00000205636 MAPKBP1O60336 1514 aa18.96■□□□□ 0.63
CMTM6-201ENST00000205636 ZHX1Q9UKY1 873 aaPredicted RBP18.96■□□□□ 0.63
CMTM6-201ENST00000205636 KIAA1211Q6ZU35 1233 aa18.94■□□□□ 0.62
CMTM6-201ENST00000205636 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
CMTM6-201ENST00000205636 MAP7D2Q96T17 732 aa18.93■□□□□ 0.62
CMTM6-201ENST00000205636 XRCC6P12956 609 aaKnown RBP eCLIP18.92■□□□□ 0.62
CMTM6-201ENST00000205636 UPF2Q9HAU5 1272 aaKnown RBP18.92■□□□□ 0.62
CMTM6-201ENST00000205636 MSNP26038 577 aaKnown RBP18.91■□□□□ 0.62
CMTM6-201ENST00000205636 PANK2Q9BZ23 570 aa18.91■□□□□ 0.62
CMTM6-201ENST00000205636 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
CMTM6-201ENST00000205636 KIF21BO75037 1637 aa18.9■□□□□ 0.62
CMTM6-201ENST00000205636 MRE11P49959 708 aa18.89■□□□□ 0.61
CMTM6-201ENST00000205636 GTF2E1P29083 439 aaPredicted RBP18.88■□□□□ 0.61
CMTM6-201ENST00000205636 SPRYD3Q8NCJ5 442 aa18.88■□□□□ 0.61
CMTM6-201ENST00000205636 FTSJ3Q8IY81 847 aaKnown RBP18.87■□□□□ 0.61
CMTM6-201ENST00000205636 PRDM10Q9NQV6 1147 aa18.87■□□□□ 0.61
CMTM6-201ENST00000205636 PLIN1O60240 522 aa18.86■□□□□ 0.61
CMTM6-201ENST00000205636 CUX2O14529 1486 aa18.85■□□□□ 0.61
CMTM6-201ENST00000205636 WIZO95785 1651 aa18.85■□□□□ 0.61
CMTM6-201ENST00000205636 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
CMTM6-201ENST00000205636 RNF123Q5XPI4 1314 aa18.84■□□□□ 0.61
CMTM6-201ENST00000205636 SECISBP2LQ93073 1101 aaKnown RBP18.83■□□□□ 0.61
CMTM6-201ENST00000205636 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
CMTM6-201ENST00000205636 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
CMTM6-201ENST00000205636 STAC3Q96MF2 364 aa18.81■□□□□ 0.6
CMTM6-201ENST00000205636 VGLL3A8MV65 326 aa18.81■□□□□ 0.6
CMTM6-201ENST00000205636 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
CMTM6-201ENST00000205636 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.8■□□□□ 0.6
CMTM6-201ENST00000205636 PRDM4Q9UKN5 801 aa18.79■□□□□ 0.6
CMTM6-201ENST00000205636 R3HCC1Q9Y3T6 440 aaKnown RBP18.79■□□□□ 0.6
CMTM6-201ENST00000205636 SMARCA2P51531 1590 aa18.78■□□□□ 0.6
CMTM6-201ENST00000205636 GRPEL1Q9HAV7 217 aa18.77■□□□□ 0.6
CMTM6-201ENST00000205636 CENPQQ7L2Z9 268 aaPredicted RBP18.76■□□□□ 0.59
CMTM6-201ENST00000205636 CNPY4Q8N129 248 aa18.76■□□□□ 0.59
CMTM6-201ENST00000205636 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
CMTM6-201ENST00000205636 WWC1Q8IX03 1113 aa18.76■□□□□ 0.59
CMTM6-201ENST00000205636 MTERF4Q7Z6M4 381 aaKnown RBP18.75■□□□□ 0.59
CMTM6-201ENST00000205636 BCCIPQ9P287 314 aaKnown RBP eCLIP18.75■□□□□ 0.59
CMTM6-201ENST00000205636 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
CMTM6-201ENST00000205636 SMAP1Q8IYB5 467 aaPredicted RBP18.75■□□□□ 0.59
CMTM6-201ENST00000205636 TRAK2O60296 914 aa18.75■□□□□ 0.59
CMTM6-201ENST00000205636 HSP90B1P14625 803 aaKnown RBP18.74■□□□□ 0.59
CMTM6-201ENST00000205636 NCAPD3P42695 1498 aa18.74■□□□□ 0.59
CMTM6-201ENST00000205636 PATL2C9JE40 543 aaKnown RBP18.73■□□□□ 0.59
CMTM6-201ENST00000205636 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.73■□□□□ 0.59
CMTM6-201ENST00000205636 APPP05067 770 aa18.71■□□□□ 0.58
CMTM6-201ENST00000205636 MCM4P33991 863 aa18.7■□□□□ 0.58
CMTM6-201ENST00000205636 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
CMTM6-201ENST00000205636 DNTTIP2Q5QJE6 756 aaKnown RBP18.68■□□□□ 0.58
CMTM6-201ENST00000205636 TEX2Q8IWB9 1127 aa18.68■□□□□ 0.58
CMTM6-201ENST00000205636 UQCRHLA0A096LP55 91 aa18.67■□□□□ 0.58
CMTM6-201ENST00000205636 UQCRHP07919 91 aa18.67■□□□□ 0.58
CMTM6-201ENST00000205636 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
CMTM6-201ENST00000205636 PDE3BQ13370 1112 aa18.67■□□□□ 0.58
CMTM6-201ENST00000205636 DDX11L8A8MPP1 907 aa18.65■□□□□ 0.58
CMTM6-201ENST00000205636 TPRNQ4KMQ1 711 aa18.65■□□□□ 0.58
CMTM6-201ENST00000205636 C8orf34Q49A92 452 aa18.64■□□□□ 0.57
CMTM6-201ENST00000205636 KIF7Q2M1P5 1343 aa18.64■□□□□ 0.57
CMTM6-201ENST00000205636 ZSCAN30Q86W11 494 aa18.63■□□□□ 0.57
CMTM6-201ENST00000205636 FOXD1Q16676 465 aa18.63■□□□□ 0.57
CMTM6-201ENST00000205636 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
CMTM6-201ENST00000205636 TAOK2Q9UL54 1235 aa18.63■□□□□ 0.57
CMTM6-201ENST00000205636 ISY1Q9ULR0 285 aaKnown RBP18.63■□□□□ 0.57
CMTM6-201ENST00000205636 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
CMTM6-201ENST00000205636 BAZ1AQ9NRL2 1556 aaPredicted RBP18.62■□□□□ 0.57
CMTM6-201ENST00000205636 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
CMTM6-201ENST00000205636 E9PSI1 815 aa18.61■□□□□ 0.57
CMTM6-201ENST00000205636 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
CMTM6-201ENST00000205636 FSD2A1L4K1 749 aa18.6■□□□□ 0.57
CMTM6-201ENST00000205636 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
CMTM6-201ENST00000205636 ERBB4Q15303 1308 aa18.6■□□□□ 0.57
CMTM6-201ENST00000205636 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
CMTM6-201ENST00000205636 OFD1O75665 1012 aa18.59■□□□□ 0.57
CMTM6-201ENST00000205636 ARAP1Q96P48 1450 aa18.59■□□□□ 0.57
CMTM6-201ENST00000205636 PPP4R3BQ5MIZ7 849 aa18.59■□□□□ 0.57
CMTM6-201ENST00000205636 CDCA7LQ96GN5 454 aa18.59■□□□□ 0.57
CMTM6-201ENST00000205636 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
CMTM6-201ENST00000205636 CCDC173Q0VFZ6 552 aa18.58■□□□□ 0.56
CMTM6-201ENST00000205636 GOLGA6L22H0YM25 854 aa18.58■□□□□ 0.56
CMTM6-201ENST00000205636 ZNF830Q96NB3 372 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms