RNA–Protein interactions for RNA: ENST00000205636.3

CMTM6-201, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM6, Length 3,863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-201ENST00000205636 PELP1Q8IZL8 1130 aaKnown RBP25.52■■□□□ 1.68
CMTM6-201ENST00000205636 MYT1Q01538 1121 aa25.19■■□□□ 1.62
CMTM6-201ENST00000205636 HRCP23327 699 aa24.64■■□□□ 1.54
CMTM6-201ENST00000205636 PPARGC1BQ86YN6 1023 aaKnown RBP24.18■■□□□ 1.46
CMTM6-201ENST00000205636 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
CMTM6-201ENST00000205636 NISCHQ9Y2I1 1504 aa24.08■■□□□ 1.44
CMTM6-201ENST00000205636 TTBK1Q5TCY1 1321 aaPredicted RBP23.98■■□□□ 1.43
CMTM6-201ENST00000205636 SCAF1Q9H7N4 1312 aaKnown RBP23.69■■□□□ 1.38
CMTM6-201ENST00000205636 PRKCSHP14314 528 aaPredicted RBP23.63■■□□□ 1.37
CMTM6-201ENST00000205636 ERICH6Q7L0X2 663 aa23.44■■□□□ 1.34
CMTM6-201ENST00000205636 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
CMTM6-201ENST00000205636 ZEB1P37275 1124 aaPredicted RBP23.2■■□□□ 1.3
CMTM6-201ENST00000205636 SLC24A1O60721 1099 aa23.15■■□□□ 1.3
CMTM6-201ENST00000205636 BCL11AQ9H165 835 aa23.15■■□□□ 1.3
CMTM6-201ENST00000205636 CENPBP07199 599 aaPredicted RBP23.13■■□□□ 1.29
CMTM6-201ENST00000205636 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
CMTM6-201ENST00000205636 ACIN1Q9UKV3 1341 aaKnown RBP23.06■■□□□ 1.28
CMTM6-201ENST00000205636 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
CMTM6-201ENST00000205636 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
CMTM6-201ENST00000205636 NEUROD1Q13562 356 aa22.89■■□□□ 1.25
CMTM6-201ENST00000205636 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
CMTM6-201ENST00000205636 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
CMTM6-201ENST00000205636 APLP2Q06481 763 aa22.68■■□□□ 1.22
CMTM6-201ENST00000205636 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
CMTM6-201ENST00000205636 YTHDC1Q96MU7 727 aaKnown RBP22.49■■□□□ 1.19
CMTM6-201ENST00000205636 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
CMTM6-201ENST00000205636 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
CMTM6-201ENST00000205636 DIEXFQ68CQ4 756 aaKnown RBP22.41■■□□□ 1.18
CMTM6-201ENST00000205636 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
CMTM6-201ENST00000205636 ANP32EQ9BTT0 268 aa22.25■■□□□ 1.15
CMTM6-201ENST00000205636 CCDC180Q9P1Z9 1646 aa22.19■■□□□ 1.14
CMTM6-201ENST00000205636 EIF5BO60841 1220 aaKnown RBP22.12■■□□□ 1.13
CMTM6-201ENST00000205636 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.02■■□□□ 1.12
CMTM6-201ENST00000205636 CSRNP3Q8WYN3 585 aa21.98■■□□□ 1.11
CMTM6-201ENST00000205636 DAXXQ9UER7 740 aaPredicted RBP21.97■■□□□ 1.11
CMTM6-201ENST00000205636 EHMT2Q96KQ7 1210 aa21.91■■□□□ 1.1
CMTM6-201ENST00000205636 ZNF316A6NFI3 1004 aaPredicted RBP21.7■■□□□ 1.06
CMTM6-201ENST00000205636 TSHZ2Q9NRE2 1034 aa21.63■■□□□ 1.05
CMTM6-201ENST00000205636 MIER1Q8N108 512 aa21.58■■□□□ 1.05
CMTM6-201ENST00000205636 CLSPNQ9HAW4 1339 aa21.58■■□□□ 1.05
CMTM6-201ENST00000205636 PLEKHG5O94827 1062 aa21.57■■□□□ 1.04
CMTM6-201ENST00000205636 SUPT16HQ9Y5B9 1047 aaKnown RBP21.56■■□□□ 1.04
CMTM6-201ENST00000205636 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
CMTM6-201ENST00000205636 DCAF8L2P0C7V8 631 aa21.5■■□□□ 1.03
CMTM6-201ENST00000205636 TRIM41Q8WV44 630 aa21.5■■□□□ 1.03
CMTM6-201ENST00000205636 BCANQ96GW7 911 aa21.5■■□□□ 1.03
CMTM6-201ENST00000205636 PODXL2Q9NZ53 605 aa21.37■■□□□ 1.01
CMTM6-201ENST00000205636 NEFLP07196 543 aa21.34■■□□□ 1.01
CMTM6-201ENST00000205636 CCDC136Q96JN2 1154 aa21.24■□□□□ 0.99
CMTM6-201ENST00000205636 UBE2Q2Q8WVN8 375 aa21.22■□□□□ 0.99
CMTM6-201ENST00000205636 MYT1LQ9UL68 1186 aa21.2■□□□□ 0.98
CMTM6-201ENST00000205636 RBM19Q9Y4C8 960 aaKnown RBP21.19■□□□□ 0.98
CMTM6-201ENST00000205636 FKBP8Q14318 412 aa21.15■□□□□ 0.98
CMTM6-201ENST00000205636 PKNOX2Q96KN3 472 aa21.14■□□□□ 0.97
CMTM6-201ENST00000205636 DEKP35659 375 aaKnown RBP21.1■□□□□ 0.97
CMTM6-201ENST00000205636 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
CMTM6-201ENST00000205636 ITGAEP38570 1179 aa20.99■□□□□ 0.95
CMTM6-201ENST00000205636 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
CMTM6-201ENST00000205636 CDK11AQ9UQ88 783 aaPredicted RBP20.92■□□□□ 0.94
CMTM6-201ENST00000205636 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.9■□□□□ 0.94
CMTM6-201ENST00000205636 NBR1Q14596 966 aa20.89■□□□□ 0.94
CMTM6-201ENST00000205636 HNRNPUL2Q1KMD3 747 aaKnown RBP20.89■□□□□ 0.94
CMTM6-201ENST00000205636 RTN4Q9NQC3 1192 aaKnown RBP20.86■□□□□ 0.93
CMTM6-201ENST00000205636 ERICH6BQ5W0A0 696 aa20.83■□□□□ 0.93
CMTM6-201ENST00000205636 MSH5O43196 834 aa20.79■□□□□ 0.92
CMTM6-201ENST00000205636 RANGAP1P46060 587 aaPredicted RBP20.7■□□□□ 0.9
CMTM6-201ENST00000205636 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
CMTM6-201ENST00000205636 A0A0U1RQG5 324 aaPredicted RBP20.59■□□□□ 0.89
CMTM6-201ENST00000205636 GLIPR1L2Q4G1C9 344 aa20.54■□□□□ 0.88
CMTM6-201ENST00000205636 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
CMTM6-201ENST00000205636 NOP58Q9Y2X3 529 aaKnown RBP20.53■□□□□ 0.88
CMTM6-201ENST00000205636 PDE4CQ08493 712 aa20.53■□□□□ 0.88
CMTM6-201ENST00000205636 IL27Q8NEV9 243 aa20.52■□□□□ 0.88
CMTM6-201ENST00000205636 ZCCHC6Q5VYS8 1495 aaKnown RBP20.49■□□□□ 0.87
CMTM6-201ENST00000205636 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
CMTM6-201ENST00000205636 KCNH8Q96L42 1107 aa20.47■□□□□ 0.87
CMTM6-201ENST00000205636 UBTFP17480 764 aaKnown RBP20.46■□□□□ 0.87
CMTM6-201ENST00000205636 ANP32AP39687 249 aaKnown RBP20.43■□□□□ 0.86
CMTM6-201ENST00000205636 PDIA4P13667 645 aaKnown RBP20.41■□□□□ 0.86
CMTM6-201ENST00000205636 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
CMTM6-201ENST00000205636 KLHL34Q8N239 644 aa20.39■□□□□ 0.85
CMTM6-201ENST00000205636 ZBTB47Q9UFB7 747 aaPredicted RBP20.37■□□□□ 0.85
CMTM6-201ENST00000205636 DDX10Q13206 875 aaKnown RBP20.33■□□□□ 0.85
CMTM6-201ENST00000205636 ANP32CO43423 234 aa20.3■□□□□ 0.84
CMTM6-201ENST00000205636 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
CMTM6-201ENST00000205636 PAK3O75914 559 aaPredicted RBP20.2■□□□□ 0.82
CMTM6-201ENST00000205636 TIMELESSQ9UNS1 1208 aa20.2■□□□□ 0.82
CMTM6-201ENST00000205636 NEFMP07197 916 aa20.19■□□□□ 0.82
CMTM6-201ENST00000205636 HNRNPUQ00839 825 aaKnown RBP eCLIP20.19■□□□□ 0.82
CMTM6-201ENST00000205636 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
CMTM6-201ENST00000205636 PPP4R2Q9NY27 417 aa20.17■□□□□ 0.82
CMTM6-201ENST00000205636 NCBP3Q53F19 620 aaKnown RBP20.16■□□□□ 0.82
CMTM6-201ENST00000205636 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
CMTM6-201ENST00000205636 ZMYND15Q9H091 742 aa20.14■□□□□ 0.82
CMTM6-201ENST00000205636 B4GALNT3Q6L9W6 998 aa20.12■□□□□ 0.81
CMTM6-201ENST00000205636 CEP162Q5TB80 1403 aa20.12■□□□□ 0.81
CMTM6-201ENST00000205636 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
CMTM6-201ENST00000205636 IPO9Q96P70 1041 aaKnown RBP20.08■□□□□ 0.81
CMTM6-201ENST00000205636 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
CMTM6-201ENST00000205636 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms