RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 NEUROD2Q15784 382 aa24.91■■□□□ 1.58
LTBP4-201ENST00000204005 DDRGK1Q96HY6 314 aa24.9■■□□□ 1.58
LTBP4-201ENST00000204005 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.583e-7■■■■□ 26.3
LTBP4-201ENST00000204005 SYNJ1O43426 1573 aa24.89■■□□□ 1.58
LTBP4-201ENST00000204005 SRPK2P78362 688 aaKnown RBP24.89■■□□□ 1.57
LTBP4-201ENST00000204005 KIF21BO75037 1637 aa24.88■■□□□ 1.57
LTBP4-201ENST00000204005 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
LTBP4-201ENST00000204005 B4GALNT3Q6L9W6 998 aa24.86■■□□□ 1.57
LTBP4-201ENST00000204005 RBM19Q9Y4C8 960 aaKnown RBP24.84■■□□□ 1.57
LTBP4-201ENST00000204005 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
LTBP4-201ENST00000204005 SAFB2Q14151 953 aaKnown RBP eCLIP24.82■■□□□ 1.56
LTBP4-201ENST00000204005 KTN1Q86UP2 1357 aaKnown RBP24.82■■□□□ 1.56
LTBP4-201ENST00000204005 GRIN2BQ13224 1484 aa24.82■■□□□ 1.56
LTBP4-201ENST00000204005 U2SURPO15042 1029 aaKnown RBP24.82■■□□□ 1.56
LTBP4-201ENST00000204005 MORC1Q86VD1 984 aa24.81■■□□□ 1.56
LTBP4-201ENST00000204005 PNNQ9H307 717 aaKnown RBP24.81■■□□□ 1.56
LTBP4-201ENST00000204005 NESP48681 1621 aa24.8■■□□□ 1.56
LTBP4-201ENST00000204005 HAP1P54257 671 aaPredicted RBP24.8■■□□□ 1.56
LTBP4-201ENST00000204005 ANP32BQ92688 251 aaKnown RBP24.8■■□□□ 1.56
LTBP4-201ENST00000204005 EIF5BO60841 1220 aaKnown RBP24.79■■□□□ 1.56
LTBP4-201ENST00000204005 STK26Q9P289 416 aa24.79■■□□□ 1.56
LTBP4-201ENST00000204005 ERICH6BQ5W0A0 696 aa24.79■■□□□ 1.56
LTBP4-201ENST00000204005 FTSJ3Q8IY81 847 aaKnown RBP24.79■■□□□ 1.56
LTBP4-201ENST00000204005 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
LTBP4-201ENST00000204005 WASHC2CQ9Y4E1 1318 aa24.77■■□□□ 1.56
LTBP4-201ENST00000204005 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
LTBP4-201ENST00000204005 TSHZ2Q9NRE2 1034 aa24.77■■□□□ 1.56
LTBP4-201ENST00000204005 NOP58Q9Y2X3 529 aaKnown RBP24.76■■□□□ 1.55
LTBP4-201ENST00000204005 LMOD2Q6P5Q4 547 aa24.76■■□□□ 1.55
LTBP4-201ENST00000204005 FGD6Q6ZV73 1430 aa24.76■■□□□ 1.55
LTBP4-201ENST00000204005 MYOM3Q5VTT5 1437 aa24.76■■□□□ 1.55
LTBP4-201ENST00000204005 CASKIN1Q8WXD9 1431 aa24.75■■□□□ 1.55
LTBP4-201ENST00000204005 EIF3AQ14152 1382 aaKnown RBP24.75■■□□□ 1.55
LTBP4-201ENST00000204005 LAS1LQ9Y4W2 734 aaKnown RBP24.75■■□□□ 1.55
LTBP4-201ENST00000204005 RALBP1Q15311 655 aa24.75■■□□□ 1.55
LTBP4-201ENST00000204005 A0A0G2JS52 829 aa24.75■■□□□ 1.55
LTBP4-201ENST00000204005 LRRC9Q6ZRR7 1453 aa24.74■■□□□ 1.55
LTBP4-201ENST00000204005 CUX1P39880 1505 aa24.73■■□□□ 1.55
LTBP4-201ENST00000204005 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
LTBP4-201ENST00000204005 TOPBP1Q92547 1522 aa24.72■■□□□ 1.55
LTBP4-201ENST00000204005 PRXQ9BXM0 1461 aa24.72■■□□□ 1.55
LTBP4-201ENST00000204005 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
LTBP4-201ENST00000204005 HDGFL2Q7Z4V5 671 aaPredicted RBP24.72■■□□□ 1.55
LTBP4-201ENST00000204005 BECN1Q14457 450 aa24.71■■□□□ 1.55
LTBP4-201ENST00000204005 CCDC144AA2RUR9 1427 aa24.71■■□□□ 1.55
LTBP4-201ENST00000204005 PHLDB1Q86UU1 1377 aa24.7■■□□□ 1.54
LTBP4-201ENST00000204005 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
LTBP4-201ENST00000204005 FRAT1Q92837 279 aaPredicted RBP24.68■■□□□ 1.54
LTBP4-201ENST00000204005 MS4A1P11836 297 aa24.68■■□□□ 1.54
LTBP4-201ENST00000204005 POLA1P09884 1462 aaPredicted RBP24.67■■□□□ 1.54
LTBP4-201ENST00000204005 IFT140Q96RY7 1462 aa24.65■■□□□ 1.54
LTBP4-201ENST00000204005 CHMP4BQ9H444 224 aaKnown RBP24.63■■□□□ 1.53
LTBP4-201ENST00000204005 FYCO1Q9BQS8 1478 aa24.62■■□□□ 1.53
LTBP4-201ENST00000204005 CYB5RLQ6IPT4 315 aa24.62■■□□□ 1.53
LTBP4-201ENST00000204005 ZNF644Q9H582 1327 aaPredicted RBP24.61■■□□□ 1.53
LTBP4-201ENST00000204005 NCOA2Q15596 1464 aa24.6■■□□□ 1.53
LTBP4-201ENST00000204005 ARXQ96QS3 562 aa24.6■■□□□ 1.53
LTBP4-201ENST00000204005 EFCAB5A4FU69 1503 aa24.58■■□□□ 1.53
LTBP4-201ENST00000204005 UACAQ9BZF9 1416 aa24.58■■□□□ 1.53
LTBP4-201ENST00000204005 SOX12O15370 315 aa24.58■■□□□ 1.52
LTBP4-201ENST00000204005 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
LTBP4-201ENST00000204005 ST20-MTHFSA0A0A6YYL1 179 aa24.57■■□□□ 1.52
LTBP4-201ENST00000204005 PRDM2Q13029 1718 aa24.56■■□□□ 1.52
LTBP4-201ENST00000204005 NLRP13Q86W25 1043 aa24.55■■□□□ 1.52
LTBP4-201ENST00000204005 TERF2IPQ9NYB0 399 aa24.54■■□□□ 1.52
LTBP4-201ENST00000204005 KIF15Q9NS87 1388 aa24.54■■□□□ 1.52
LTBP4-201ENST00000204005 RGS3P49796 1198 aa24.54■■□□□ 1.52
LTBP4-201ENST00000204005 NUTM2DQ5VT03 806 aaPredicted RBP24.52■■□□□ 1.52
LTBP4-201ENST00000204005 U2AF1L5P0DN76 240 aaPredicted RBP24.52■■□□□ 1.52
LTBP4-201ENST00000204005 U2AF1Q01081 240 aaKnown RBP eCLIP24.52■■□□□ 1.52
LTBP4-201ENST00000204005 EID1Q9Y6B2 187 aa24.52■■□□□ 1.52
LTBP4-201ENST00000204005 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
LTBP4-201ENST00000204005 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
LTBP4-201ENST00000204005 PRG4Q92954 1404 aaPredicted RBP24.49■■□□□ 1.51
LTBP4-201ENST00000204005 VGFO15240 615 aaPredicted RBP24.48■■□□□ 1.51
LTBP4-201ENST00000204005 SYNJ2O15056 1496 aa24.48■■□□□ 1.51
LTBP4-201ENST00000204005 USP47Q96K76 1375 aa24.47■■□□□ 1.51
LTBP4-201ENST00000204005 ANKRD50Q9ULJ7 1429 aa24.47■■□□□ 1.51
LTBP4-201ENST00000204005 CASC1Q6TDU7 716 aa24.46■■□□□ 1.51
LTBP4-201ENST00000204005 RCAN3Q9UKA8 241 aa24.45■■□□□ 1.51
LTBP4-201ENST00000204005 RTF1Q92541 710 aaKnown RBP24.44■■□□□ 1.5
LTBP4-201ENST00000204005 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
LTBP4-201ENST00000204005 PEG3Q9GZU2 1588 aa24.42■■□□□ 1.5
LTBP4-201ENST00000204005 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
LTBP4-201ENST00000204005 CALD1Q05682 793 aaKnown RBP24.42■■□□□ 1.5
LTBP4-201ENST00000204005 LAMC3Q9Y6N6 1575 aa24.42■■□□□ 1.5
LTBP4-201ENST00000204005 DEKP35659 375 aaKnown RBP24.41■■□□□ 1.5
LTBP4-201ENST00000204005 PAK3O75914 559 aaPredicted RBP24.4■■□□□ 1.5
LTBP4-201ENST00000204005 PANK3Q9H999 370 aa24.4■■□□□ 1.5
LTBP4-201ENST00000204005 MYBBP1AQ9BQG0 1328 aaKnown RBP24.39■■□□□ 1.5
LTBP4-201ENST00000204005 STAC3Q96MF2 364 aa24.38■■□□□ 1.49
LTBP4-201ENST00000204005 EHBP1L1Q8N3D4 1523 aa24.38■■□□□ 1.49
LTBP4-201ENST00000204005 GLIPR1L2Q4G1C9 344 aa24.38■■□□□ 1.49
LTBP4-201ENST00000204005 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
LTBP4-201ENST00000204005 PRKRIP1Q9H875 184 aaPredicted RBP24.37■■□□□ 1.49
LTBP4-201ENST00000204005 IPO8O15397 1037 aaKnown RBP24.37■■□□□ 1.49
LTBP4-201ENST00000204005 PDE3BQ13370 1112 aa24.37■■□□□ 1.49
LTBP4-201ENST00000204005 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
LTBP4-201ENST00000204005 MIA2Q96PC5 1412 aa24.35■■□□□ 1.49
LTBP4-201ENST00000204005 GOLGA6L22H0YM25 854 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms