RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.57
CDC27-201ENST00000066544 HECW1Q76N89 1606 aa11.45□□□□□ -0.58
CDC27-201ENST00000066544 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
CDC27-201ENST00000066544 RBM19Q9Y4C8 960 aaKnown RBP11.44□□□□□ -0.58
CDC27-201ENST00000066544 PRG4Q92954 1404 aaPredicted RBP11.44□□□□□ -0.58
CDC27-201ENST00000066544 PRKRIP1Q9H875 184 aaPredicted RBP11.43□□□□□ -0.58
CDC27-201ENST00000066544 KDM2AQ9Y2K7 1162 aa11.42□□□□□ -0.58
CDC27-201ENST00000066544 ARHGEF11O15085 1522 aa11.42□□□□□ -0.58
CDC27-201ENST00000066544 DAPK1P53355 1430 aa11.42□□□□□ -0.58
CDC27-201ENST00000066544 ABCC5O15440 1437 aa11.42□□□□□ -0.58
CDC27-201ENST00000066544 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
CDC27-201ENST00000066544 MRC2Q9UBG0 1479 aa11.42□□□□□ -0.58
CDC27-201ENST00000066544 MIA2Q96PC5 1412 aa11.42□□□□□ -0.58
CDC27-201ENST00000066544 PKD2Q13563 968 aa11.41□□□□□ -0.58
CDC27-201ENST00000066544 CCDC7Q96M83 1385 aa11.41□□□□□ -0.58
CDC27-201ENST00000066544 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
CDC27-201ENST00000066544 KIF7Q2M1P5 1343 aa11.41□□□□□ -0.58
CDC27-201ENST00000066544 WDR62O43379 1518 aa11.4□□□□□ -0.58
CDC27-201ENST00000066544 ADAMTS12P58397 1594 aa11.4□□□□□ -0.58
CDC27-201ENST00000066544 PBRM1Q86U86 1689 aa11.4□□□□□ -0.59
CDC27-201ENST00000066544 CNTLNQ9NXG0 1405 aa11.39□□□□□ -0.59
CDC27-201ENST00000066544 NUP153P49790 1475 aaKnown RBP11.39□□□□□ -0.59
CDC27-201ENST00000066544 PLB1Q6P1J6 1458 aa11.38□□□□□ -0.59
CDC27-201ENST00000066544 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
CDC27-201ENST00000066544 JPH4Q96JJ6 628 aa11.38□□□□□ -0.59
CDC27-201ENST00000066544 B4GALNT3Q6L9W6 998 aa11.37□□□□□ -0.59
CDC27-201ENST00000066544 DISP1Q96F81 1524 aa11.37□□□□□ -0.59
CDC27-201ENST00000066544 KIAA0586Q9BVV6 1533 aa11.37□□□□□ -0.59
CDC27-201ENST00000066544 ERCC6Q03468 1493 aa11.36□□□□□ -0.59
CDC27-201ENST00000066544 PLEKHD1A6NEE1 506 aa11.36□□□□□ -0.59
CDC27-201ENST00000066544 AKNAQ7Z591 1439 aa11.35□□□□□ -0.59
CDC27-201ENST00000066544 GCC2Q8IWJ2 1684 aa11.35□□□□□ -0.59
CDC27-201ENST00000066544 RPRD2Q5VT52 1461 aaKnown RBP11.35□□□□□ -0.59
CDC27-201ENST00000066544 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
CDC27-201ENST00000066544 IFT140Q96RY7 1462 aa11.34□□□□□ -0.59
CDC27-201ENST00000066544 HNRNPMP52272 730 aaKnown RBP eCLIP11.34□□□□□ -0.599e-6■■■■□ 20.2
CDC27-201ENST00000066544 GRIN2AQ12879 1464 aa11.34□□□□□ -0.59
CDC27-201ENST00000066544 SALL2Q9Y467 1007 aaPredicted RBP11.33□□□□□ -0.6
CDC27-201ENST00000066544 NUP155O75694 1391 aa11.33□□□□□ -0.6
CDC27-201ENST00000066544 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
CDC27-201ENST00000066544 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
CDC27-201ENST00000066544 TSPY4P0CV99 314 aa11.33□□□□□ -0.6
CDC27-201ENST00000066544 TSPY10P0CW01 314 aa11.33□□□□□ -0.6
CDC27-201ENST00000066544 KIAA0556O60303 1618 aa11.33□□□□□ -0.6
CDC27-201ENST00000066544 RGL3Q3MIN7 710 aa11.32□□□□□ -0.6
CDC27-201ENST00000066544 CARD11Q9BXL7 1154 aa11.32□□□□□ -0.6
CDC27-201ENST00000066544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■■□□□ 12.2
CDC27-201ENST00000066544 USP47Q96K76 1375 aa11.32□□□□□ -0.6
CDC27-201ENST00000066544 CAMSAP2Q08AD1 1489 aa11.31□□□□□ -0.6
CDC27-201ENST00000066544 TEX14Q8IWB6 1497 aa11.31□□□□□ -0.6
CDC27-201ENST00000066544 DCAF11Q8TEB1 546 aa11.31□□□□□ -0.6
CDC27-201ENST00000066544 ANKRD30AQ9BXX3 1397 aa11.3□□□□□ -0.6
CDC27-201ENST00000066544 RAPGEF6Q8TEU7 1601 aa11.3□□□□□ -0.6
CDC27-201ENST00000066544 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
CDC27-201ENST00000066544 PZPP20742 1482 aa11.29□□□□□ -0.6
CDC27-201ENST00000066544 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
CDC27-201ENST00000066544 ANKRD50Q9ULJ7 1429 aa11.29□□□□□ -0.6
CDC27-201ENST00000066544 ST20-MTHFSA0A0A6YYL1 179 aa11.29□□□□□ -0.6
CDC27-201ENST00000066544 TMC1Q8TDI8 760 aa11.29□□□□□ -0.6
CDC27-201ENST00000066544 DNMT1P26358 1616 aaKnown RBP11.29□□□□□ -0.6
CDC27-201ENST00000066544 ZBED9Q6R2W3 1325 aa11.28□□□□□ -0.6
CDC27-201ENST00000066544 CARMIL2Q6F5E8 1435 aa11.27□□□□□ -0.6
CDC27-201ENST00000066544 KIAA1107Q9UPP5 1409 aa11.27□□□□□ -0.6
CDC27-201ENST00000066544 KIF14Q15058 1648 aa11.27□□□□□ -0.61
CDC27-201ENST00000066544 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
CDC27-201ENST00000066544 MSH5O43196 834 aa11.27□□□□□ -0.61
CDC27-201ENST00000066544 ERICH6Q7L0X2 663 aa11.27□□□□□ -0.61
CDC27-201ENST00000066544 SPATA31E1Q6ZUB1 1445 aa11.26□□□□□ -0.61
CDC27-201ENST00000066544 C9orf84Q5VXU9 1444 aa11.23□□□□□ -0.61
CDC27-201ENST00000066544 CEP170Q5SW79 1584 aa11.23□□□□□ -0.61
CDC27-201ENST00000066544 KIF15Q9NS87 1388 aa11.23□□□□□ -0.61
CDC27-201ENST00000066544 SYNJ2O15056 1496 aa11.22□□□□□ -0.61
CDC27-201ENST00000066544 DHX29Q7Z478 1369 aaKnown RBP11.22□□□□□ -0.61
CDC27-201ENST00000066544 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.62
CDC27-201ENST00000066544 CCDC136Q96JN2 1154 aa11.21□□□□□ -0.62
CDC27-201ENST00000066544 ATP10BO94823 1461 aa11.2□□□□□ -0.62
CDC27-201ENST00000066544 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
CDC27-201ENST00000066544 NUDCQ9Y266 331 aa11.19□□□□□ -0.62
CDC27-201ENST00000066544 PNISRQ8TF01 805 aaKnown RBP11.19□□□□□ -0.62
CDC27-201ENST00000066544 ROCK2O75116 1388 aaKnown RBP11.19□□□□□ -0.62
CDC27-201ENST00000066544 PTPRGP23470 1445 aa11.19□□□□□ -0.62
CDC27-201ENST00000066544 CC2D1BQ5T0F9 858 aaKnown RBP11.18□□□□□ -0.62
CDC27-201ENST00000066544 BCORL1Q5H9F3 1711 aa11.18□□□□□ -0.62
CDC27-201ENST00000066544 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
CDC27-201ENST00000066544 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
CDC27-201ENST00000066544 ADGRL2O95490 1459 aa11.15□□□□□ -0.62
CDC27-201ENST00000066544 MBD5Q9P267 1494 aa11.15□□□□□ -0.62
CDC27-201ENST00000066544 NUP160Q12769 1436 aa11.14□□□□□ -0.63
CDC27-201ENST00000066544 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
CDC27-201ENST00000066544 FANCIQ9NVI1 1328 aa11.13□□□□□ -0.63
CDC27-201ENST00000066544 CCDC144AA2RUR9 1427 aa11.13□□□□□ -0.63
CDC27-201ENST00000066544 ABCC10Q5T3U5 1492 aa11.13□□□□□ -0.63
CDC27-201ENST00000066544 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
CDC27-201ENST00000066544 SMG6Q86US8 1419 aaKnown RBP11.12□□□□□ -0.63
CDC27-201ENST00000066544 CDCA7LQ96GN5 454 aa11.11□□□□□ -0.63
CDC27-201ENST00000066544 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
CDC27-201ENST00000066544 RALGAPBQ86X10 1494 aa11.11□□□□□ -0.63
CDC27-201ENST00000066544 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
CDC27-201ENST00000066544 KDM5CP41229 1560 aa11.1□□□□□ -0.63
CDC27-201ENST00000066544 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms