RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.91■■□□□ 1.9
PPP1R3F-201ENST00000055335 SMG6Q86US8 1419 aaKnown RBP26.89■■□□□ 1.9
PPP1R3F-201ENST00000055335 SKAP1Q86WV1 359 aa26.88■■□□□ 1.89
PPP1R3F-201ENST00000055335 DENND4BO75064 1496 aaPredicted RBP26.87■■□□□ 1.89
PPP1R3F-201ENST00000055335 EFCAB5A4FU69 1503 aa26.87■■□□□ 1.89
PPP1R3F-201ENST00000055335 KDM2AQ9Y2K7 1162 aa26.87■■□□□ 1.89
PPP1R3F-201ENST00000055335 ZNF644Q9H582 1327 aaPredicted RBP26.87■■□□□ 1.89
PPP1R3F-201ENST00000055335 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
PPP1R3F-201ENST00000055335 FANCD2Q9BXW9 1451 aa26.86■■□□□ 1.89
PPP1R3F-201ENST00000055335 ZNF777Q9ULD5 760 aaPredicted RBP26.84■■□□□ 1.89
PPP1R3F-201ENST00000055335 KDM6BO15054 1643 aa26.82■■□□□ 1.88
PPP1R3F-201ENST00000055335 PDE4AP27815 886 aa26.82■■□□□ 1.88
PPP1R3F-201ENST00000055335 PNISRQ8TF01 805 aaKnown RBP26.81■■□□□ 1.88
PPP1R3F-201ENST00000055335 PLIN1O60240 522 aa26.79■■□□□ 1.88
PPP1R3F-201ENST00000055335 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
PPP1R3F-201ENST00000055335 ANKRD30BQ9BXX2 1392 aa26.77■■□□□ 1.88
PPP1R3F-201ENST00000055335 SLC4A3P48751 1232 aa26.76■■□□□ 1.87
PPP1R3F-201ENST00000055335 RRP1P56182 461 aaKnown RBP26.76■■□□□ 1.87
PPP1R3F-201ENST00000055335 USP47Q96K76 1375 aa26.76■■□□□ 1.87
PPP1R3F-201ENST00000055335 RCAN3Q9UKA8 241 aa26.76■■□□□ 1.87
PPP1R3F-201ENST00000055335 CARD11Q9BXL7 1154 aa26.74■■□□□ 1.87
PPP1R3F-201ENST00000055335 SUPT6HQ7KZ85 1726 aaKnown RBP26.73■■□□□ 1.87
PPP1R3F-201ENST00000055335 DHX29Q7Z478 1369 aaKnown RBP26.71■■□□□ 1.87
PPP1R3F-201ENST00000055335 RNF123Q5XPI4 1314 aa26.7■■□□□ 1.87
PPP1R3F-201ENST00000055335 TCERG1O14776 1098 aaKnown RBP26.7■■□□□ 1.86
PPP1R3F-201ENST00000055335 CDCA7LQ96GN5 454 aa26.7■■□□□ 1.86
PPP1R3F-201ENST00000055335 PKD2Q13563 968 aa26.69■■□□□ 1.86
PPP1R3F-201ENST00000055335 MAGI3Q5TCQ9 1506 aa26.69■■□□□ 1.86
PPP1R3F-201ENST00000055335 ABCA10Q8WWZ4 1543 aa26.69■■□□□ 1.86
PPP1R3F-201ENST00000055335 DAXXQ9UER7 740 aaPredicted RBP26.68■■□□□ 1.86
PPP1R3F-201ENST00000055335 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
PPP1R3F-201ENST00000055335 EHBP1L1Q8N3D4 1523 aa26.68■■□□□ 1.86
PPP1R3F-201ENST00000055335 NESP48681 1621 aa26.67■■□□□ 1.86
PPP1R3F-201ENST00000055335 RPRD2Q5VT52 1461 aaKnown RBP26.67■■□□□ 1.86
PPP1R3F-201ENST00000055335 SPATA31E1Q6ZUB1 1445 aa26.66■■□□□ 1.86
PPP1R3F-201ENST00000055335 ST20-MTHFSA0A0A6YYL1 179 aa26.66■■□□□ 1.86
PPP1R3F-201ENST00000055335 TOPBP1Q92547 1522 aa26.66■■□□□ 1.86
PPP1R3F-201ENST00000055335 UGGT2Q9NYU1 1516 aa26.65■■□□□ 1.86
PPP1R3F-201ENST00000055335 BACH2Q9BYV9 841 aa26.64■■□□□ 1.86
PPP1R3F-201ENST00000055335 BRPF3Q9ULD4 1205 aa26.64■■□□□ 1.86
PPP1R3F-201ENST00000055335 EIF5BO60841 1220 aaKnown RBP26.63■■□□□ 1.85
PPP1R3F-201ENST00000055335 CDK13Q14004 1512 aaKnown RBP26.62■■□□□ 1.85
PPP1R3F-201ENST00000055335 PPM1GO15355 546 aaPredicted RBP26.59■■□□□ 1.85
PPP1R3F-201ENST00000055335 TEX14Q8IWB6 1497 aa26.59■■□□□ 1.85
PPP1R3F-201ENST00000055335 CC2D1BQ5T0F9 858 aaKnown RBP26.58■■□□□ 1.85
PPP1R3F-201ENST00000055335 HECW1Q76N89 1606 aa26.58■■□□□ 1.85
PPP1R3F-201ENST00000055335 CTTNBP2Q8WZ74 1663 aa26.58■■□□□ 1.85
PPP1R3F-201ENST00000055335 LRRIQ1Q96JM4 1722 aa26.58■■□□□ 1.85
PPP1R3F-201ENST00000055335 DCAF11Q8TEB1 546 aa26.56■■□□□ 1.84
PPP1R3F-201ENST00000055335 CRBNQ96SW2 442 aa26.55■■□□□ 1.84
PPP1R3F-201ENST00000055335 CFDP1Q9UEE9 299 aaPredicted RBP26.55■■□□□ 1.84
PPP1R3F-201ENST00000055335 MYBBP1AQ9BQG0 1328 aaKnown RBP26.54■■□□□ 1.84
PPP1R3F-201ENST00000055335 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
PPP1R3F-201ENST00000055335 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
PPP1R3F-201ENST00000055335 DAPK1P53355 1430 aa26.52■■□□□ 1.84
PPP1R3F-201ENST00000055335 KIF15Q9NS87 1388 aa26.51■■□□□ 1.84
PPP1R3F-201ENST00000055335 USP35Q9P2H5 1018 aa26.51■■□□□ 1.83
PPP1R3F-201ENST00000055335 RGL3Q3MIN7 710 aa26.5■■□□□ 1.83
PPP1R3F-201ENST00000055335 EPRSP07814 1512 aaKnown RBP26.5■■□□□ 1.83
PPP1R3F-201ENST00000055335 CUL7Q14999 1698 aa26.5■■□□□ 1.83
PPP1R3F-201ENST00000055335 TCOF1Q13428 1488 aaKnown RBP26.5■■□□□ 1.83
PPP1R3F-201ENST00000055335 ABCC5O15440 1437 aa26.49■■□□□ 1.83
PPP1R3F-201ENST00000055335 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
PPP1R3F-201ENST00000055335 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
PPP1R3F-201ENST00000055335 MIA2Q96PC5 1412 aa26.48■■□□□ 1.83
PPP1R3F-201ENST00000055335 NFKBIBQ15653 356 aa26.47■■□□□ 1.83
PPP1R3F-201ENST00000055335 RGS3P49796 1198 aa26.46■■□□□ 1.83
PPP1R3F-201ENST00000055335 GSE1Q14687 1217 aa26.46■■□□□ 1.83
PPP1R3F-201ENST00000055335 RALBP1Q15311 655 aa26.46■■□□□ 1.83
PPP1R3F-201ENST00000055335 GCC2Q8IWJ2 1684 aa26.46■■□□□ 1.83
PPP1R3F-201ENST00000055335 C20orf194Q5TEA3 1177 aa26.45■■□□□ 1.83
PPP1R3F-201ENST00000055335 DDRGK1Q96HY6 314 aa26.45■■□□□ 1.82
PPP1R3F-201ENST00000055335 MS4A1P11836 297 aa26.44■■□□□ 1.82
PPP1R3F-201ENST00000055335 NLRP13Q86W25 1043 aa26.43■■□□□ 1.82
PPP1R3F-201ENST00000055335 FRAT1Q92837 279 aaPredicted RBP26.43■■□□□ 1.82
PPP1R3F-201ENST00000055335 SAMD9Q5K651 1589 aa26.42■■□□□ 1.82
PPP1R3F-201ENST00000055335 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
PPP1R3F-201ENST00000055335 BCORL1Q5H9F3 1711 aa26.41■■□□□ 1.82
PPP1R3F-201ENST00000055335 BRD4O60885 1362 aaPredicted RBP26.41■■□□□ 1.82
PPP1R3F-201ENST00000055335 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
PPP1R3F-201ENST00000055335 ROCK2O75116 1388 aaKnown RBP26.39■■□□□ 1.82
PPP1R3F-201ENST00000055335 NUP155O75694 1391 aa26.39■■□□□ 1.82
PPP1R3F-201ENST00000055335 KTN1Q86UP2 1357 aaKnown RBP26.37■■□□□ 1.81
PPP1R3F-201ENST00000055335 LRPPRCP42704 1394 aaKnown RBP26.36■■□□□ 1.81
PPP1R3F-201ENST00000055335 ROCK1Q13464 1354 aa26.36■■□□□ 1.81
PPP1R3F-201ENST00000055335 ARXQ96QS3 562 aa26.34■■□□□ 1.81
PPP1R3F-201ENST00000055335 KIAA1107Q9UPP5 1409 aa26.34■■□□□ 1.81
PPP1R3F-201ENST00000055335 ARID4BQ4LE39 1312 aaPredicted RBP26.34■■□□□ 1.81
PPP1R3F-201ENST00000055335 PDE3BQ13370 1112 aa26.33■■□□□ 1.81
PPP1R3F-201ENST00000055335 URB2Q14146 1524 aaKnown RBP26.33■■□□□ 1.81
PPP1R3F-201ENST00000055335 WASHC2CQ9Y4E1 1318 aa26.32■■□□□ 1.8
PPP1R3F-201ENST00000055335 FRAT2O75474 233 aaPredicted RBP26.32■■□□□ 1.8
PPP1R3F-201ENST00000055335 PZPP20742 1482 aa26.32■■□□□ 1.8
PPP1R3F-201ENST00000055335 NBPF1Q3BBV0 1214 aa26.3■■□□□ 1.8
PPP1R3F-201ENST00000055335 PDS5BQ9NTI5 1447 aa26.28■■□□□ 1.8
PPP1R3F-201ENST00000055335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.28■■□□□ 1.8
PPP1R3F-201ENST00000055335 PANK3Q9H999 370 aa26.27■■□□□ 1.8
PPP1R3F-201ENST00000055335 ABCA5Q8WWZ7 1642 aa26.26■■□□□ 1.79
PPP1R3F-201ENST00000055335 PRG4Q92954 1404 aaPredicted RBP26.26■■□□□ 1.79
PPP1R3F-201ENST00000055335 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms