RNA–Protein interactions for RNA: ENST00000034275.12

RANBP3-201, Transcript of RAN binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RANBP3, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-201ENST00000034275 ZNF644Q9H582 1327 aaPredicted RBP25.47■■□□□ 1.67
RANBP3-201ENST00000034275 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
RANBP3-201ENST00000034275 PREX2Q70Z35 1606 aa25.47■■□□□ 1.67
RANBP3-201ENST00000034275 EFCAB2Q5VUJ9 269 aa25.46■■□□□ 1.67
RANBP3-201ENST00000034275 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
RANBP3-201ENST00000034275 ARHGAP5Q13017 1502 aa25.45■■□□□ 1.66
RANBP3-201ENST00000034275 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
RANBP3-201ENST00000034275 CD109Q6YHK3 1445 aa25.43■■□□□ 1.66
RANBP3-201ENST00000034275 ARAP3Q8WWN8 1544 aa25.41■■□□□ 1.66
RANBP3-201ENST00000034275 CAMSAP2Q08AD1 1489 aa25.41■■□□□ 1.66
RANBP3-201ENST00000034275 GLI2P10070 1586 aa25.4■■□□□ 1.66
RANBP3-201ENST00000034275 DIP2BQ9P265 1576 aa25.36■■□□□ 1.65
RANBP3-201ENST00000034275 FANCAO15360 1455 aa25.35■■□□□ 1.65
RANBP3-201ENST00000034275 HNRNPMP52272 730 aaKnown RBP eCLIP25.34■■□□□ 1.657e-7■■■□□ 15.5
RANBP3-201ENST00000034275 RSPH4AQ5TD94 716 aa25.34■■□□□ 1.65
RANBP3-201ENST00000034275 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
RANBP3-201ENST00000034275 SAMD9LQ8IVG5 1584 aa25.33■■□□□ 1.65
RANBP3-201ENST00000034275 MAP3K4Q9Y6R4 1608 aa25.32■■□□□ 1.64
RANBP3-201ENST00000034275 KIAA1107Q9UPP5 1409 aa25.31■■□□□ 1.64
RANBP3-201ENST00000034275 DAPK1P53355 1430 aa25.29■■□□□ 1.64
RANBP3-201ENST00000034275 TSPY4P0CV99 314 aa25.28■■□□□ 1.64
RANBP3-201ENST00000034275 TSPY10P0CW01 314 aa25.28■■□□□ 1.64
RANBP3-201ENST00000034275 ABCC5O15440 1437 aa25.28■■□□□ 1.64
RANBP3-201ENST00000034275 DNMT1P26358 1616 aaKnown RBP25.28■■□□□ 1.64
RANBP3-201ENST00000034275 PTPRKQ15262 1439 aa25.27■■□□□ 1.64
RANBP3-201ENST00000034275 MBD5Q9P267 1494 aa25.26■■□□□ 1.64
RANBP3-201ENST00000034275 CHIC2Q9UKJ5 165 aa25.26■■□□□ 1.63
RANBP3-201ENST00000034275 AKNAQ7Z591 1439 aa25.26■■□□□ 1.63
RANBP3-201ENST00000034275 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
RANBP3-201ENST00000034275 CFAP74Q9C0B2 1584 aa25.24■■□□□ 1.63
RANBP3-201ENST00000034275 SYCP2Q9BX26 1530 aa25.24■■□□□ 1.63
RANBP3-201ENST00000034275 ARHGEF5Q12774 1597 aa25.24■■□□□ 1.63
RANBP3-201ENST00000034275 ADGRL1O94910 1474 aa25.23■■□□□ 1.63
RANBP3-201ENST00000034275 ABCC1P33527 1531 aa25.22■■□□□ 1.63
RANBP3-201ENST00000034275 NEO1Q92859 1461 aa25.22■■□□□ 1.63
RANBP3-201ENST00000034275 CCDC141Q6ZP82 1450 aa25.22■■□□□ 1.63
RANBP3-201ENST00000034275 TRHP20396 242 aaPredicted RBP25.21■■□□□ 1.63
RANBP3-201ENST00000034275 ARHGEF12Q9NZN5 1544 aa25.21■■□□□ 1.63
RANBP3-201ENST00000034275 SCAPERQ9BY12 1400 aa25.21■■□□□ 1.63
RANBP3-201ENST00000034275 TSPOAP1O95153 1857 aa25.19■■□□□ 1.62
RANBP3-201ENST00000034275 TEX14Q8IWB6 1497 aa25.18■■□□□ 1.62
RANBP3-201ENST00000034275 ROCK1Q13464 1354 aa25.17■■□□□ 1.62
RANBP3-201ENST00000034275 AFAP1Q8N556 730 aa25.17■■□□□ 1.62
RANBP3-201ENST00000034275 RRP7BPQ9NSQ0 103 aa25.16■■□□□ 1.62
RANBP3-201ENST00000034275 SHANK2Q9UPX8 1470 aa25.16■■□□□ 1.62
RANBP3-201ENST00000034275 C9orf84Q5VXU9 1444 aa25.16■■□□□ 1.62
RANBP3-201ENST00000034275 TRAPPC8Q9Y2L5 1435 aa25.16■■□□□ 1.62
RANBP3-201ENST00000034275 CROCC2H7BZ55 1655 aa25.15■■□□□ 1.62
RANBP3-201ENST00000034275 SETD5Q9C0A6 1442 aa25.15■■□□□ 1.62
RANBP3-201ENST00000034275 ANKRD30AQ9BXX3 1397 aa25.14■■□□□ 1.61
RANBP3-201ENST00000034275 HFM1A2PYH4 1435 aa25.13■■□□□ 1.61
RANBP3-201ENST00000034275 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
RANBP3-201ENST00000034275 PPRC1Q5VV67 1664 aaKnown RBP25.11■■□□□ 1.61
RANBP3-201ENST00000034275 SPAG9O60271 1321 aaKnown RBP25.11■■□□□ 1.61
RANBP3-201ENST00000034275 NAIPQ13075 1403 aa25.1■■□□□ 1.61
RANBP3-201ENST00000034275 ADGRL2O95490 1459 aa25.1■■□□□ 1.61
RANBP3-201ENST00000034275 ZNF518AQ6AHZ1 1483 aa25.09■■□□□ 1.61
RANBP3-201ENST00000034275 DENND4BO75064 1496 aaPredicted RBP25.08■■□□□ 1.61
RANBP3-201ENST00000034275 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.61
RANBP3-201ENST00000034275 HRCP23327 699 aa25.08■■□□□ 1.6
RANBP3-201ENST00000034275 MYT1LQ9UL68 1186 aa25.08■■□□□ 1.6
RANBP3-201ENST00000034275 RAB3GAP2Q9H2M9 1393 aa25.07■■□□□ 1.6
RANBP3-201ENST00000034275 MAST1Q9Y2H9 1570 aa25.07■■□□□ 1.6
RANBP3-201ENST00000034275 RAPGEF3O95398 923 aa25.05■■□□□ 1.6
RANBP3-201ENST00000034275 RTEL1-TNFRSF6BF6WH68 1400 aa25.05■■□□□ 1.6
RANBP3-201ENST00000034275 POGZQ7Z3K3 1410 aa25.05■■□□□ 1.6
RANBP3-201ENST00000034275 KIF15Q9NS87 1388 aa25.01■■□□□ 1.59
RANBP3-201ENST00000034275 GCC2Q8IWJ2 1684 aa25■■□□□ 1.59
RANBP3-201ENST00000034275 ACIN1Q9UKV3 1341 aaKnown RBP24.99■■□□□ 1.59
RANBP3-201ENST00000034275 KDM5CP41229 1560 aa24.97■■□□□ 1.59
RANBP3-201ENST00000034275 ATP7AQ04656 1500 aa24.97■■□□□ 1.59
RANBP3-201ENST00000034275 PLXNC1O60486 1568 aa24.96■■□□□ 1.59
RANBP3-201ENST00000034275 ANKRD50Q9ULJ7 1429 aa24.96■■□□□ 1.59
RANBP3-201ENST00000034275 MLH3Q9UHC1 1453 aa24.96■■□□□ 1.59
RANBP3-201ENST00000034275 ZFYVE16Q7Z3T8 1539 aa24.96■■□□□ 1.59
RANBP3-201ENST00000034275 RICTORQ6R327 1708 aa24.95■■□□□ 1.59
RANBP3-201ENST00000034275 INO80Q9ULG1 1556 aaPredicted RBP24.95■■□□□ 1.58
RANBP3-201ENST00000034275 CCER1Q8TC90 406 aaPredicted RBP24.93■■□□□ 1.58
RANBP3-201ENST00000034275 DUOX2Q9NRD8 1548 aa24.92■■□□□ 1.58
RANBP3-201ENST00000034275 HECW2Q9P2P5 1572 aa24.91■■□□□ 1.58
RANBP3-201ENST00000034275 KIDINS220Q9ULH0 1771 aa24.91■■□□□ 1.58
RANBP3-201ENST00000034275 TRIM52Q96A61 297 aa24.9■■□□□ 1.58
RANBP3-201ENST00000034275 COL17A1Q9UMD9 1497 aaPredicted RBP24.9■■□□□ 1.58
RANBP3-201ENST00000034275 KDM6BO15054 1643 aa24.89■■□□□ 1.58
RANBP3-201ENST00000034275 FRMPD1Q5SYB0 1578 aa24.88■■□□□ 1.57
RANBP3-201ENST00000034275 MAGI2Q86UL8 1455 aa24.87■■□□□ 1.57
RANBP3-201ENST00000034275 ERBINQ96RT1 1412 aa24.86■■□□□ 1.57
RANBP3-201ENST00000034275 DHX29Q7Z478 1369 aaKnown RBP24.86■■□□□ 1.57
RANBP3-201ENST00000034275 ZMYM4Q5VZL5 1548 aa24.85■■□□□ 1.57
RANBP3-201ENST00000034275 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
RANBP3-201ENST00000034275 A2MP01023 1474 aa24.81■■□□□ 1.56
RANBP3-201ENST00000034275 YEATS2Q9ULM3 1422 aa24.8■■□□□ 1.56
RANBP3-201ENST00000034275 ABCA6Q8N139 1617 aa24.78■■□□□ 1.56
RANBP3-201ENST00000034275 KIF3BO15066 747 aa24.77■■□□□ 1.56
RANBP3-201ENST00000034275 NUP155O75694 1391 aa24.77■■□□□ 1.56
RANBP3-201ENST00000034275 MPHOSPH9Q99550 1183 aa24.76■■□□□ 1.55
RANBP3-201ENST00000034275 DIP2CQ9Y2E4 1556 aa24.76■■□□□ 1.55
RANBP3-201ENST00000034275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.75■■□□□ 1.552e-7■□□□□ 10.3
RANBP3-201ENST00000034275 ATP10AO60312 1499 aa24.75■■□□□ 1.55
RANBP3-201ENST00000034275 SLC4A1APQ9BWU0 796 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms