RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 NPM1P06748 294 aaKnown RBP eCLIP28.88■■■□□ 2.21
IFRD1-201ENST00000005558 ABCA9Q8IUA7 1624 aa28.87■■■□□ 2.21
IFRD1-201ENST00000005558 MAPKBP1O60336 1514 aa28.85■■■□□ 2.21
IFRD1-201ENST00000005558 SAMD9LQ8IVG5 1584 aa28.85■■■□□ 2.21
IFRD1-201ENST00000005558 DNMT1P26358 1616 aaKnown RBP28.84■■■□□ 2.21
IFRD1-201ENST00000005558 PLCH2O75038 1416 aa28.84■■■□□ 2.21
IFRD1-201ENST00000005558 ABCC5O15440 1437 aa28.83■■■□□ 2.21
IFRD1-201ENST00000005558 DAPK1P53355 1430 aa28.8■■■□□ 2.2
IFRD1-201ENST00000005558 ZNF777Q9ULD5 760 aaPredicted RBP28.8■■■□□ 2.2
IFRD1-201ENST00000005558 ARHGAP5Q13017 1502 aa28.77■■■□□ 2.2
IFRD1-201ENST00000005558 MBD5Q9P267 1494 aa28.77■■■□□ 2.2
IFRD1-201ENST00000005558 ARAP3Q8WWN8 1544 aa28.76■■■□□ 2.19
IFRD1-201ENST00000005558 CROCC2H7BZ55 1655 aa28.73■■■□□ 2.19
IFRD1-201ENST00000005558 ARHGEF12Q9NZN5 1544 aa28.71■■■□□ 2.19
IFRD1-201ENST00000005558 SETD5Q9C0A6 1442 aa28.71■■■□□ 2.19
IFRD1-201ENST00000005558 ARHGEF5Q12774 1597 aa28.71■■■□□ 2.19
IFRD1-201ENST00000005558 RAB3GAP2Q9H2M9 1393 aa28.69■■■□□ 2.18
IFRD1-201ENST00000005558 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
IFRD1-201ENST00000005558 HNRNPMP52272 730 aaKnown RBP eCLIP28.69■■■□□ 2.18
IFRD1-201ENST00000005558 CHIC2Q9UKJ5 165 aa28.69■■■□□ 2.18
IFRD1-201ENST00000005558 NAIPQ13075 1403 aa28.69■■■□□ 2.18
IFRD1-201ENST00000005558 AKNAQ7Z591 1439 aa28.69■■■□□ 2.18
IFRD1-201ENST00000005558 SYCP2Q9BX26 1530 aa28.67■■■□□ 2.18
IFRD1-201ENST00000005558 KIAA1107Q9UPP5 1409 aa28.65■■■□□ 2.18
IFRD1-201ENST00000005558 EFCAB2Q5VUJ9 269 aa28.65■■■□□ 2.18
IFRD1-201ENST00000005558 ABCC1P33527 1531 aa28.65■■■□□ 2.18
IFRD1-201ENST00000005558 GLI2P10070 1586 aa28.65■■■□□ 2.18
IFRD1-201ENST00000005558 ROCK1Q13464 1354 aa28.63■■■□□ 2.17
IFRD1-201ENST00000005558 GCC2Q8IWJ2 1684 aa28.63■■■□□ 2.17
IFRD1-201ENST00000005558 MAP3K4Q9Y6R4 1608 aa28.62■■■□□ 2.17
IFRD1-201ENST00000005558 DIP2BQ9P265 1576 aa28.62■■■□□ 2.17
IFRD1-201ENST00000005558 FANCAO15360 1455 aa28.61■■■□□ 2.17
IFRD1-201ENST00000005558 CD109Q6YHK3 1445 aa28.61■■■□□ 2.17
IFRD1-201ENST00000005558 RRP7BPQ9NSQ0 103 aa28.61■■■□□ 2.17
IFRD1-201ENST00000005558 KDM6BO15054 1643 aa28.61■■■□□ 2.17
IFRD1-201ENST00000005558 ADGRL2O95490 1459 aa28.61■■■□□ 2.17
IFRD1-201ENST00000005558 SHANK2Q9UPX8 1470 aa28.61■■■□□ 2.17
IFRD1-201ENST00000005558 PLEKHH2Q8IVE3 1493 aa28.6■■■□□ 2.17
IFRD1-201ENST00000005558 ADGBQ8N7X0 1667 aa28.6■■■□□ 2.17
IFRD1-201ENST00000005558 CCDC141Q6ZP82 1450 aa28.59■■■□□ 2.17
IFRD1-201ENST00000005558 NCOA1Q15788 1441 aa28.59■■■□□ 2.17
IFRD1-201ENST00000005558 HRCP23327 699 aa28.57■■■□□ 2.16
IFRD1-201ENST00000005558 DNAJC5Q9H3Z4 198 aa28.57■■■□□ 2.16
IFRD1-201ENST00000005558 C9orf84Q5VXU9 1444 aa28.55■■■□□ 2.16
IFRD1-201ENST00000005558 TRAPPC8Q9Y2L5 1435 aa28.55■■■□□ 2.16
IFRD1-201ENST00000005558 DHX57Q6P158 1386 aaKnown RBP28.55■■■□□ 2.16
IFRD1-201ENST00000005558 MAST1Q9Y2H9 1570 aa28.53■■■□□ 2.16
IFRD1-201ENST00000005558 RSPH4AQ5TD94 716 aa28.53■■■□□ 2.16
IFRD1-201ENST00000005558 CCER1Q8TC90 406 aaPredicted RBP28.52■■■□□ 2.16
IFRD1-201ENST00000005558 KIF13AQ9H1H9 1805 aa28.51■■■□□ 2.15
IFRD1-201ENST00000005558 PPRC1Q5VV67 1664 aaKnown RBP28.48■■■□□ 2.15
IFRD1-201ENST00000005558 FAM69CQ0P6D2 419 aa28.48■■■□□ 2.15
IFRD1-201ENST00000005558 ADGRL1O94910 1474 aa28.47■■■□□ 2.15
IFRD1-201ENST00000005558 TSPY4P0CV99 314 aa28.46■■■□□ 2.15
IFRD1-201ENST00000005558 TSPY10P0CW01 314 aa28.46■■■□□ 2.15
IFRD1-201ENST00000005558 SCAPERQ9BY12 1400 aa28.45■■■□□ 2.15
IFRD1-201ENST00000005558 ANKRD30AQ9BXX3 1397 aa28.45■■■□□ 2.15
IFRD1-201ENST00000005558 CFAP74Q9C0B2 1584 aa28.45■■■□□ 2.14
IFRD1-201ENST00000005558 AFAP1Q8N556 730 aa28.43■■■□□ 2.14
IFRD1-201ENST00000005558 NEO1Q92859 1461 aa28.42■■■□□ 2.14
IFRD1-201ENST00000005558 PLXNC1O60486 1568 aa28.4■■■□□ 2.14
IFRD1-201ENST00000005558 TSPOAP1O95153 1857 aa28.38■■■□□ 2.13
IFRD1-201ENST00000005558 ZFYVE16Q7Z3T8 1539 aa28.37■■■□□ 2.13
IFRD1-201ENST00000005558 KIF15Q9NS87 1388 aa28.37■■■□□ 2.13
IFRD1-201ENST00000005558 INO80Q9ULG1 1556 aaPredicted RBP28.36■■■□□ 2.13
IFRD1-201ENST00000005558 DENND4BO75064 1496 aaPredicted RBP28.35■■■□□ 2.13
IFRD1-201ENST00000005558 RTEL1-TNFRSF6BF6WH68 1400 aa28.34■■■□□ 2.13
IFRD1-201ENST00000005558 ANKRD50Q9ULJ7 1429 aa28.34■■■□□ 2.13
IFRD1-201ENST00000005558 POGZQ7Z3K3 1410 aa28.33■■■□□ 2.13
IFRD1-201ENST00000005558 KDM5CP41229 1560 aa28.33■■■□□ 2.13
IFRD1-201ENST00000005558 KIDINS220Q9ULH0 1771 aa28.3■■■□□ 2.12
IFRD1-201ENST00000005558 SPAG9O60271 1321 aaKnown RBP28.3■■■□□ 2.12
IFRD1-201ENST00000005558 ATP7AQ04656 1500 aa28.29■■■□□ 2.12
IFRD1-201ENST00000005558 ZNF518AQ6AHZ1 1483 aa28.29■■■□□ 2.12
IFRD1-201ENST00000005558 RICTORQ6R327 1708 aa28.29■■■□□ 2.12
IFRD1-201ENST00000005558 CLSPNQ9HAW4 1339 aa28.26■■■□□ 2.11
IFRD1-201ENST00000005558 FRMPD1Q5SYB0 1578 aa28.26■■■□□ 2.11
IFRD1-201ENST00000005558 DUOX2Q9NRD8 1548 aa28.25■■■□□ 2.11
IFRD1-201ENST00000005558 ZEB1P37275 1124 aaPredicted RBP28.24■■■□□ 2.11
IFRD1-201ENST00000005558 RAPGEF3O95398 923 aa28.23■■■□□ 2.11
IFRD1-201ENST00000005558 PZPP20742 1482 aa28.23■■■□□ 2.11
IFRD1-201ENST00000005558 MLH3Q9UHC1 1453 aa28.22■■■□□ 2.11
IFRD1-201ENST00000005558 TEX14Q8IWB6 1497 aa28.21■■■□□ 2.11
IFRD1-201ENST00000005558 TRIM52Q96A61 297 aa28.19■■■□□ 2.1
IFRD1-201ENST00000005558 HECW2Q9P2P5 1572 aa28.18■■■□□ 2.1
IFRD1-201ENST00000005558 COL17A1Q9UMD9 1497 aaPredicted RBP28.18■■■□□ 2.1
IFRD1-201ENST00000005558 MPHOSPH9Q99550 1183 aa28.18■■■□□ 2.1
IFRD1-201ENST00000005558 ERBINQ96RT1 1412 aa28.17■■■□□ 2.1
IFRD1-201ENST00000005558 KDM5DQ9BY66 1539 aa28.17■■■□□ 2.1
IFRD1-201ENST00000005558 UNC13BO14795 1591 aa28.16■■■□□ 2.1
IFRD1-201ENST00000005558 ABCA6Q8N139 1617 aa28.14■■■□□ 2.1
IFRD1-201ENST00000005558 ACIN1Q9UKV3 1341 aaKnown RBP28.13■■■□□ 2.09
IFRD1-201ENST00000005558 MAGI2Q86UL8 1455 aa28.11■■■□□ 2.09
IFRD1-201ENST00000005558 ZMYM4Q5VZL5 1548 aa28.11■■■□□ 2.09
IFRD1-201ENST00000005558 DHX29Q7Z478 1369 aaKnown RBP28.1■■■□□ 2.09
IFRD1-201ENST00000005558 SIN3AQ96ST3 1273 aa28.08■■■□□ 2.09
IFRD1-201ENST00000005558 NUP155O75694 1391 aa28.08■■■□□ 2.09
IFRD1-201ENST00000005558 DIP2CQ9Y2E4 1556 aa28.08■■■□□ 2.09
IFRD1-201ENST00000005558 DEPDC5O75140 1603 aa28.07■■■□□ 2.08
IFRD1-201ENST00000005558 YEATS2Q9ULM3 1422 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms