RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
IFRD1-201ENST00000005558 CCDC180Q9P1Z9 1646 aa38.8■■■■□ 3.8
IFRD1-201ENST00000005558 ZCCHC6Q5VYS8 1495 aaKnown RBP37.21■■■■□ 3.55
IFRD1-201ENST00000005558 ABCC9O60706 1549 aa36.94■■■■□ 3.5
IFRD1-201ENST00000005558 DCAF1Q9Y4B6 1507 aa36.68■■■■□ 3.46
IFRD1-201ENST00000005558 DCAF8L2P0C7V8 631 aa36.55■■■■□ 3.44
IFRD1-201ENST00000005558 MYO15BQ96JP2 1530 aa36.35■■■■□ 3.41
IFRD1-201ENST00000005558 NACADO15069 1562 aa36.18■■■■□ 3.38
IFRD1-201ENST00000005558 RB1CC1Q8TDY2 1594 aa35.91■■■■□ 3.34
IFRD1-201ENST00000005558 SHROOM4Q9ULL8 1493 aa35.89■■■■□ 3.34
IFRD1-201ENST00000005558 SCRIBQ14160 1630 aa35.62■■■■□ 3.29
IFRD1-201ENST00000005558 UNC13AQ9UPW8 1703 aa35.36■■■■□ 3.25
IFRD1-201ENST00000005558 BICRAQ9NZM4 1560 aa35.02■■■■□ 3.2
IFRD1-201ENST00000005558 PABPN1Q86U42 306 aaKnown RBP eCLIP34.78■■■■□ 3.16
IFRD1-201ENST00000005558 CECR2Q9BXF3 1484 aa34.56■■■■□ 3.12
IFRD1-201ENST00000005558 SUPT5HO00267 1087 aaKnown RBP34.33■■■■□ 3.09
IFRD1-201ENST00000005558 RSF1Q96T23 1441 aaPredicted RBP34.32■■■■□ 3.08
IFRD1-201ENST00000005558 MROH2BQ7Z745 1585 aa34.3■■■■□ 3.08
IFRD1-201ENST00000005558 BAZ1AQ9NRL2 1556 aaPredicted RBP34.21■■■■□ 3.07
IFRD1-201ENST00000005558 SMARCA4P51532 1647 aa34.17■■■■□ 3.06
IFRD1-201ENST00000005558 WIZO95785 1651 aa34■■■■□ 3.03
IFRD1-201ENST00000005558 EIF4G1Q04637 1599 aaKnown RBP33.88■■■■□ 3.01
IFRD1-201ENST00000005558 PEG3Q9GZU2 1588 aa33.8■■■■□ 3
IFRD1-201ENST00000005558 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
IFRD1-201ENST00000005558 TOP2AP11388 1531 aaKnown RBP33.58■■■□□ 2.97
IFRD1-201ENST00000005558 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
IFRD1-201ENST00000005558 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
IFRD1-201ENST00000005558 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
IFRD1-201ENST00000005558 BAZ1BQ9UIG0 1483 aaKnown RBP33.39■■■□□ 2.94
IFRD1-201ENST00000005558 HMGXB3Q12766 1538 aa33.34■■■□□ 2.93
IFRD1-201ENST00000005558 CCDC88BA6NC98 1476 aa33.27■■■□□ 2.92
IFRD1-201ENST00000005558 DNAJC5BQ9UF47 199 aa33.01■■■□□ 2.87
IFRD1-201ENST00000005558 CHIC1Q5VXU3 224 aa32.81■■■□□ 2.84
IFRD1-201ENST00000005558 CFTRP13569 1480 aa32.62■■■□□ 2.81
IFRD1-201ENST00000005558 CADPSQ9ULU8 1353 aa32.52■■■□□ 2.8
IFRD1-201ENST00000005558 ABCC8Q09428 1581 aa32.47■■■□□ 2.79
IFRD1-201ENST00000005558 PRDM2Q13029 1718 aa32.43■■■□□ 2.78
IFRD1-201ENST00000005558 NESP48681 1621 aa32.41■■■□□ 2.78
IFRD1-201ENST00000005558 LAMC3Q9Y6N6 1575 aa32.3■■■□□ 2.76
IFRD1-201ENST00000005558 TRIM41Q8WV44 630 aa32.28■■■□□ 2.76
IFRD1-201ENST00000005558 WRNQ14191 1432 aaPredicted RBP eCLIP32.22■■■□□ 2.75
IFRD1-201ENST00000005558 SYNJ1O43426 1573 aa32.2■■■□□ 2.74
IFRD1-201ENST00000005558 FANCD2Q9BXW9 1451 aa32.15■■■□□ 2.74
IFRD1-201ENST00000005558 CUX1P39880 1505 aa32.08■■■□□ 2.73
IFRD1-201ENST00000005558 TOP2BQ02880 1626 aa32.05■■■□□ 2.72
IFRD1-201ENST00000005558 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
IFRD1-201ENST00000005558 KIF21AQ7Z4S6 1674 aa32.01■■■□□ 2.71
IFRD1-201ENST00000005558 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
IFRD1-201ENST00000005558 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
IFRD1-201ENST00000005558 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
IFRD1-201ENST00000005558 DNMBPQ6XZF7 1577 aa31.82■■■□□ 2.69
IFRD1-201ENST00000005558 TOPBP1Q92547 1522 aa31.81■■■□□ 2.68
IFRD1-201ENST00000005558 SOGA1O94964 1423 aa31.8■■■□□ 2.68
IFRD1-201ENST00000005558 RUSC2Q8N2Y8 1516 aa31.76■■■□□ 2.67
IFRD1-201ENST00000005558 FGD5Q6ZNL6 1462 aa31.72■■■□□ 2.67
IFRD1-201ENST00000005558 FAM9AQ8IZU1 332 aaPredicted RBP31.7■■■□□ 2.66
IFRD1-201ENST00000005558 MRC2Q9UBG0 1479 aa31.66■■■□□ 2.66
IFRD1-201ENST00000005558 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
IFRD1-201ENST00000005558 ERCC6Q03468 1493 aa31.58■■■□□ 2.65
IFRD1-201ENST00000005558 THOC2Q8NI27 1593 aaKnown RBP31.58■■■□□ 2.65
IFRD1-201ENST00000005558 WDR62O43379 1518 aa31.56■■■□□ 2.64
IFRD1-201ENST00000005558 LOC105371045A0A1W2PR82 267 aa31.55■■■□□ 2.64
IFRD1-201ENST00000005558 RAD54L2Q9Y4B4 1467 aa31.55■■■□□ 2.64
IFRD1-201ENST00000005558 EEA1Q15075 1411 aa31.53■■■□□ 2.64
IFRD1-201ENST00000005558 WDR97A6NE52 1622 aa31.44■■■□□ 2.62
IFRD1-201ENST00000005558 ABCA10Q8WWZ4 1543 aa31.44■■■□□ 2.62
IFRD1-201ENST00000005558 CUX2O14529 1486 aa31.44■■■□□ 2.62
IFRD1-201ENST00000005558 CSRNP3Q8WYN3 585 aa31.44■■■□□ 2.62
IFRD1-201ENST00000005558 TARBP1Q13395 1621 aaKnown RBP31.42■■■□□ 2.62
IFRD1-201ENST00000005558 KIF27Q86VH2 1401 aa31.39■■■□□ 2.62
IFRD1-201ENST00000005558 IGF1RP08069 1367 aa31.26■■■□□ 2.59
IFRD1-201ENST00000005558 ABCA5Q8WWZ7 1642 aa31.25■■■□□ 2.59
IFRD1-201ENST00000005558 EHMT2Q96KQ7 1210 aa31.24■■■□□ 2.59
IFRD1-201ENST00000005558 KIF21BO75037 1637 aa31.24■■■□□ 2.59
IFRD1-201ENST00000005558 PRXQ9BXM0 1461 aa31.22■■■□□ 2.59
IFRD1-201ENST00000005558 TDRD9Q8NDG6 1382 aaKnown RBP31.22■■■□□ 2.59
IFRD1-201ENST00000005558 IFT140Q96RY7 1462 aa31.21■■■□□ 2.59
IFRD1-201ENST00000005558 ZNF608Q9ULD9 1512 aaPredicted RBP31.16■■■□□ 2.58
IFRD1-201ENST00000005558 RAPGEF2Q9Y4G8 1499 aa31.15■■■□□ 2.58
IFRD1-201ENST00000005558 GAPVD1Q14C86 1478 aa31.13■■■□□ 2.57
IFRD1-201ENST00000005558 GOLGA3Q08378 1498 aa31.11■■■□□ 2.57
IFRD1-201ENST00000005558 AQRO60306 1485 aaKnown RBP eCLIP31.1■■■□□ 2.574e-9■■■□□ 16.9
IFRD1-201ENST00000005558 ERICH3Q5RHP9 1530 aa31.06■■■□□ 2.56
IFRD1-201ENST00000005558 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
IFRD1-201ENST00000005558 PBRM1Q86U86 1689 aa31.02■■■□□ 2.56
IFRD1-201ENST00000005558 TNIKQ9UKE5 1360 aa31■■■□□ 2.55
IFRD1-201ENST00000005558 EIF4G3O43432 1585 aaKnown RBP30.99■■■□□ 2.55
IFRD1-201ENST00000005558 CUL7Q14999 1698 aa30.97■■■□□ 2.55
IFRD1-201ENST00000005558 UBTFP17480 764 aaKnown RBP30.91■■■□□ 2.54
IFRD1-201ENST00000005558 GRIN2BQ13224 1484 aa30.91■■■□□ 2.54
IFRD1-201ENST00000005558 ADAMTS12P58397 1594 aa30.83■■■□□ 2.53
IFRD1-201ENST00000005558 CEP162Q5TB80 1403 aa30.8■■■□□ 2.52
IFRD1-201ENST00000005558 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
IFRD1-201ENST00000005558 FHAD1B1AJZ9 1412 aa30.77■■■□□ 2.52
IFRD1-201ENST00000005558 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
IFRD1-201ENST00000005558 CTTNBP2Q8WZ74 1663 aa30.62■■■□□ 2.49
IFRD1-201ENST00000005558 CLIP1P30622 1438 aa30.61■■■□□ 2.49
IFRD1-201ENST00000005558 SYNJ2O15056 1496 aa30.59■■■□□ 2.49
IFRD1-201ENST00000005558 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
IFRD1-201ENST00000005558 RANGAP1P46060 587 aaPredicted RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms