RNA–Protein interactions for RNA: ENSMUST00000218866.1

Smc6-208, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

TSL 1 (best) BASIC

Gene Smc6, Length 3,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-208ENSMUST00000218866 Zbtb7cQ8VCZ7 619 aa18.38■□□□□ 0.53
Smc6-208ENSMUST00000218866 Rundc1Q0VDN7 615 aa18.36■□□□□ 0.53
Smc6-208ENSMUST00000218866 Ccdc27Q3V036 639 aa18.36■□□□□ 0.53
Smc6-208ENSMUST00000218866 Rad21Q61550 635 aaKnown RBP18.34■□□□□ 0.53
Smc6-208ENSMUST00000218866 PogzQ8BZH4 1409 aaKnown RBP18.34■□□□□ 0.53
Smc6-208ENSMUST00000218866 Unc13aQ4KUS2 1712 aa18.33■□□□□ 0.53
Smc6-208ENSMUST00000218866 Upf2A2AT37 1269 aaKnown RBP18.33■□□□□ 0.52
Smc6-208ENSMUST00000218866 Hdac5Q9Z2V6 1113 aa18.33■□□□□ 0.52
Smc6-208ENSMUST00000218866 Tcerg1Q8CGF7 1100 aaKnown RBP18.31■□□□□ 0.52
Smc6-208ENSMUST00000218866 ChgaP26339 463 aaKnown RBP18.3■□□□□ 0.52
Smc6-208ENSMUST00000218866 Ipo9Q91YE6 1041 aa18.3■□□□□ 0.52
Smc6-208ENSMUST00000218866 Card11Q8CIS0 1159 aa18.29■□□□□ 0.52
Smc6-208ENSMUST00000218866 Pprc1Q6NZN1 1644 aa18.27■□□□□ 0.52
Smc6-208ENSMUST00000218866 Peg3Q3URU2 1571 aa18.27■□□□□ 0.52
Smc6-208ENSMUST00000218866 Phldb1Q6PDH0 1371 aaKnown RBP18.26■□□□□ 0.51
Smc6-208ENSMUST00000218866 Trak1Q6PD31 939 aa18.26■□□□□ 0.51
Smc6-208ENSMUST00000218866 Dhx9O70133 1380 aaKnown RBP18.26■□□□□ 0.51
Smc6-208ENSMUST00000218866 Mug1P28665 1476 aa18.25■□□□□ 0.51
Smc6-208ENSMUST00000218866 Ift140E9PY46 1464 aa18.24■□□□□ 0.51
Smc6-208ENSMUST00000218866 Samd9lQ69Z37 1561 aa18.24■□□□□ 0.51
Smc6-208ENSMUST00000218866 Thoc2B1AZI6 1594 aaKnown RBP18.24■□□□□ 0.51
Smc6-208ENSMUST00000218866 SynmQ70IV5 1561 aa18.24■□□□□ 0.51
Smc6-208ENSMUST00000218866 Dapk1Q80YE7 1442 aa18.24■□□□□ 0.51
Smc6-208ENSMUST00000218866 NexmifQ5DTT1 1515 aa18.23■□□□□ 0.51
Smc6-208ENSMUST00000218866 Rprd2Q6NXI6 1469 aaKnown RBP18.23■□□□□ 0.51
Smc6-208ENSMUST00000218866 Cwc22Q8C5N3 908 aaKnown RBP18.22■□□□□ 0.51
Smc6-208ENSMUST00000218866 Gpatch8A2A6A1 1505 aa18.22■□□□□ 0.51
Smc6-208ENSMUST00000218866 CadpsQ80TJ1 1355 aa18.21■□□□□ 0.51
Smc6-208ENSMUST00000218866 DaxxO35613 739 aa18.21■□□□□ 0.51
Smc6-208ENSMUST00000218866 NeflP08551 543 aa18.21■□□□□ 0.51
Smc6-208ENSMUST00000218866 Cul7Q8VE73 1689 aa18.21■□□□□ 0.51
Smc6-208ENSMUST00000218866 Abcc5Q9R1X5 1436 aa18.2■□□□□ 0.5
Smc6-208ENSMUST00000218866 4933416C03RikQ3V063 378 aa18.2■□□□□ 0.5
Smc6-208ENSMUST00000218866 Rpgrip1lQ8CG73 1264 aa18.2■□□□□ 0.5
Smc6-208ENSMUST00000218866 EprsQ8CGC7 1512 aaKnown RBP18.19■□□□□ 0.5
Smc6-208ENSMUST00000218866 Mtus2Q3UHD3 1353 aa18.19■□□□□ 0.5
Smc6-208ENSMUST00000218866 BC005561E9Q5E2 1589 aa18.18■□□□□ 0.5
Smc6-208ENSMUST00000218866 B4galnt3Q6L8S8 986 aa18.18■□□□□ 0.5
Smc6-208ENSMUST00000218866 Erbb3Q61526 1339 aa18.18■□□□□ 0.5
Smc6-208ENSMUST00000218866 Hsp90aa1P07901 733 aaKnown RBP18.17■□□□□ 0.5
Smc6-208ENSMUST00000218866 Lmtk2Q3TYD6 1471 aa18.17■□□□□ 0.5
Smc6-208ENSMUST00000218866 Q7TT23 1179 aa18.16■□□□□ 0.5
Smc6-208ENSMUST00000218866 Plekhh2Q8C115 1491 aa18.16■□□□□ 0.5
Smc6-208ENSMUST00000218866 Plekhg5Q66T02 1073 aa18.16■□□□□ 0.5
Smc6-208ENSMUST00000218866 Ttll5Q8CHB8 1328 aa18.15■□□□□ 0.5
Smc6-208ENSMUST00000218866 Dbr1Q923B1 550 aa18.14■□□□□ 0.5
Smc6-208ENSMUST00000218866 Polr1aO35134 1717 aaKnown RBP18.14■□□□□ 0.49
Smc6-208ENSMUST00000218866 Zfp444Q3TDV8 331 aaKnown RBP18.13■□□□□ 0.49
Smc6-208ENSMUST00000218866 Fkbp15Q6P9Q6 1216 aaKnown RBP18.13■□□□□ 0.49
Smc6-208ENSMUST00000218866 Amer1Q7TS75 1132 aa18.11■□□□□ 0.49
Smc6-208ENSMUST00000218866 Iqcf3Q9D498 203 aa18.11■□□□□ 0.49
Smc6-208ENSMUST00000218866 Dhx57Q6P5D3 1388 aaKnown RBP18.1■□□□□ 0.49
Smc6-208ENSMUST00000218866 Anp32bQ9EST5 272 aaKnown RBP18.1■□□□□ 0.49
Smc6-208ENSMUST00000218866 WrnO09053 1401 aa18.09■□□□□ 0.49
Smc6-208ENSMUST00000218866 Apbb1Q9QXJ1 710 aa18.08■□□□□ 0.49
Smc6-208ENSMUST00000218866 Arhgef40Q3UPH7 1517 aa18.08■□□□□ 0.48
Smc6-208ENSMUST00000218866 Ncoa3O09000 1398 aa18.08■□□□□ 0.48
Smc6-208ENSMUST00000218866 Zscan21Q07231 555 aa18.07■□□□□ 0.48
Smc6-208ENSMUST00000218866 Gtf3c3Q3TMP1 882 aa18.07■□□□□ 0.48
Smc6-208ENSMUST00000218866 Pik3c2gO70167 1506 aa18.06■□□□□ 0.48
Smc6-208ENSMUST00000218866 Fhod3Q76LL6 1578 aa18.05■□□□□ 0.48
Smc6-208ENSMUST00000218866 CanxP35564 591 aaKnown RBP18.05■□□□□ 0.48
Smc6-208ENSMUST00000218866 Rfx7F8VPJ6 1459 aa18.05■□□□□ 0.48
Smc6-208ENSMUST00000218866 Plcd4Q8K3R3 807 aa18.04■□□□□ 0.48
Smc6-208ENSMUST00000218866 Pla2r1Q62028 1487 aa18.04■□□□□ 0.48
Smc6-208ENSMUST00000218866 Adgrb2Q8CGM1 1561 aa18.04■□□□□ 0.48
Smc6-208ENSMUST00000218866 Ttll13A4Q9F6 804 aa18.04■□□□□ 0.48
Smc6-208ENSMUST00000218866 Mak16Q8BGS0 296 aaKnown RBP18.04■□□□□ 0.48
Smc6-208ENSMUST00000218866 Setbp1Q9Z180 1582 aa18.04■□□□□ 0.48
Smc6-208ENSMUST00000218866 Myom3A2ABU4 1439 aa18.04■□□□□ 0.48
Smc6-208ENSMUST00000218866 Map4P27546 1125 aaKnown RBP18.02■□□□□ 0.47
Smc6-208ENSMUST00000218866 Irx3P81067 507 aa18.02■□□□□ 0.47
Smc6-208ENSMUST00000218866 Mug2P28666 1451 aa18.02■□□□□ 0.47
Smc6-208ENSMUST00000218866 Disp1Q3TDN0 1521 aa18.01■□□□□ 0.47
Smc6-208ENSMUST00000218866 Esx1O88933 382 aa18■□□□□ 0.47
Smc6-208ENSMUST00000218866 CrbnQ8C7D2 445 aa18■□□□□ 0.47
Smc6-208ENSMUST00000218866 Kdm6bQ5NCY0 1641 aa17.99■□□□□ 0.47
Smc6-208ENSMUST00000218866 ArxO35085 564 aa17.99■□□□□ 0.47
Smc6-208ENSMUST00000218866 Kank1E9Q238 1360 aa17.98■□□□□ 0.47
Smc6-208ENSMUST00000218866 Nup155Q99P88 1391 aaKnown RBP17.98■□□□□ 0.47
Smc6-208ENSMUST00000218866 Inpp5dQ9ES52 1191 aa17.97■□□□□ 0.47
Smc6-208ENSMUST00000218866 Pank3Q8R2W9 370 aa17.97■□□□□ 0.47
Smc6-208ENSMUST00000218866 Prkrip1Q9CWV6 186 aaKnown RBP17.97■□□□□ 0.47
Smc6-208ENSMUST00000218866 Prdm10Q3UTQ7 1184 aa17.97■□□□□ 0.47
Smc6-208ENSMUST00000218866 SphkapQ6NSW3 1687 aa17.96■□□□□ 0.47
Smc6-208ENSMUST00000218866 Cdk13Q69ZA1 1511 aaKnown RBP17.96■□□□□ 0.47
Smc6-208ENSMUST00000218866 Tdrd9Q14BI7 1383 aa17.96■□□□□ 0.47
Smc6-208ENSMUST00000218866 Sart3Q9JLI8 962 aaKnown RBP17.95■□□□□ 0.46
Smc6-208ENSMUST00000218866 PxdnQ3UQ28 1475 aa17.95■□□□□ 0.46
Smc6-208ENSMUST00000218866 Kif14L0N7N1 1674 aaKnown RBP17.95■□□□□ 0.46
Smc6-208ENSMUST00000218866 Naip6Q9JIB6 1403 aa17.95■□□□□ 0.46
Smc6-208ENSMUST00000218866 Cc2d2bA0A286YDU8 1405 aa17.94■□□□□ 0.46
Smc6-208ENSMUST00000218866 Soga1E1U8D0 1418 aa17.94■□□□□ 0.46
Smc6-208ENSMUST00000218866 Gcc2Q8CHG3 1679 aa17.94■□□□□ 0.46
Smc6-208ENSMUST00000218866 AlkP97793 1621 aa17.93■□□□□ 0.46
Smc6-208ENSMUST00000218866 WizO88286 1684 aaKnown RBP17.93■□□□□ 0.46
Smc6-208ENSMUST00000218866 Il16O54824 1322 aa17.92■□□□□ 0.46
Smc6-208ENSMUST00000218866 Grin2aP35436 1464 aa17.91■□□□□ 0.46
Smc6-208ENSMUST00000218866 Neurod2Q62414 383 aa17.91■□□□□ 0.46
Smc6-208ENSMUST00000218866 Magi3Q9EQJ9 1476 aa17.91■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 59.6 ms