RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Polr1aO35134 1717 aaKnown RBP12.66□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Mre11Q61216 706 aa12.66□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Glipr1l2Q9CQ35 332 aa12.65□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Srpk2O54781 681 aaKnown RBP12.65□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Tmf1B9EKI3 1091 aa12.65□□□□□ -0.38
Col6a5-203ENSMUST00000190193 Rsph3aQ3UFY4 516 aa12.64□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Pcmtd1P59913 357 aa12.64□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Hsp90b1P08113 802 aaKnown RBP12.64□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Ylpm1Q9R0I7 1386 aaKnown RBP12.64□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Trim30aP15533 496 aa12.64□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Rock2P70336 1388 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Slc4a3P16283 1227 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Cspp1B2RX88 1205 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Tpm3-rs7D3Z2H9 248 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Kiaa0754Q69ZZ9 979 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Mroh3A0A1D5RM54 893 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Neurod2Q62414 383 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Pdcl3Q8BVF2 240 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 R3hcc1Q8BSI6 488 aa12.62□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Taok2Q6ZQ29 1240 aa12.61□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Cux1P53564 1515 aa12.61□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Atp6v1dP57746 247 aa12.61□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Fbxo2Q80UW2 297 aa12.6□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Smg6P61406 1418 aaKnown RBP12.6□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Armcx1Q9CX83 456 aa12.59□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Grwd1Q810D6 446 aaKnown RBP12.59□□□□□ -0.39
Col6a5-203ENSMUST00000190193 Zscan21Q07231 555 aa12.58□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Gm6268A2A3U9 297 aa12.58□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Cep162Q6ZQ06 1403 aa12.57□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Sh3bp5Q9Z131 463 aa12.57□□□□□ -0.4
Col6a5-203ENSMUST00000190193 ScribQ80U72 1612 aa12.57□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Kdm2aP59997 1161 aa12.56□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Fkbp15Q6P9Q6 1216 aaKnown RBP12.56□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Kif15Q6P9L6 1387 aa12.56□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Smarca2Q6DIC0 1577 aa12.55□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Dusp9Q7TNL7 452 aa12.55□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Sart3Q9JLI8 962 aaKnown RBP12.55□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Taf3Q5HZG4 932 aa12.54□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Gm20521D3Z5F7 333 aa12.53□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Zrsr2Q62377 462 aaKnown RBP12.53□□□□□ -0.4
Col6a5-203ENSMUST00000190193 Plekhh2Q8C115 1491 aa12.52□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Crybg2B7ZCC2 1516 aa12.52□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Stag3O70576 1240 aa12.51□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Rrp9Q91WM3 475 aaKnown RBP12.51□□□□□ -0.41
Col6a5-203ENSMUST00000190193 SlkO54988 1233 aa12.5□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Ubl4bQ9CQ84 188 aa12.5□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Mfap1aC0HKD8 439 aaKnown RBP12.49□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Mfap1bC0HKD9 439 aaKnown RBP12.49□□□□□ -0.41
Col6a5-203ENSMUST00000190193 AampJ3QN89 436 aa12.49□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Hspa5P20029 655 aaKnown RBP12.49□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Rassf8Q8CJ96 419 aa12.49□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Ankrd36D3Z4K0 1415 aa12.49□□□□□ -0.41
Col6a5-203ENSMUST00000190193 St18Q80TY4 1045 aa12.48□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Anapc15P60007 132 aa12.48□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Exoc6Q8R313 802 aa12.48□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Ccdc34Q3UI66 367 aa12.47□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Iffo2Q8R2V2 512 aa12.47□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Golga2Q921M4 999 aa12.47□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Cgnl1Q6AW69 1298 aa12.47□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Tpm3P21107 285 aaKnown RBP12.46□□□□□ -0.41
Col6a5-203ENSMUST00000190193 Tpm2P58774 284 aa12.46□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Rundc1Q0VDN7 615 aa12.46□□□□□ -0.42
Col6a5-203ENSMUST00000190193 UacaQ8CGB3 1411 aa12.46□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Speer4f1Q9D5Q6 258 aa12.45□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Ftsj3Q9DBE9 838 aaKnown RBP12.45□□□□□ -0.42
Col6a5-203ENSMUST00000190193 CalrP14211 416 aaKnown RBP12.45□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Gpatch11Q3UFS4 262 aa12.45□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Anp32eP97822 260 aaKnown RBP12.45□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Dnai2A2AC93 623 aa12.44□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Filip1lQ6P6L0 1131 aa12.44□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Cwc15Q9JHS9 229 aaKnown RBP12.44□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Safb2Q80YR5 991 aaKnown RBP12.44□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Ralbp1Q62172 648 aa12.43□□□□□ -0.42
Col6a5-203ENSMUST00000190193 CgnP59242 1191 aa12.43□□□□□ -0.42
Col6a5-203ENSMUST00000190193 ChgaP26339 463 aaKnown RBP12.42□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Nolc1E9Q5C9 702 aaKnown RBP12.42□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Ccar1Q8CH18 1146 aaKnown RBP12.42□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Eif4g2Q62448 906 aaKnown RBP12.42□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Ccdc88bQ4QRL3 1481 aa12.42□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Ccdc173A0JLY1 547 aa12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Pkd2O35245 966 aa12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Irx6Q9ER75 438 aa12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Synj1Q8CHC4 1574 aa12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 EzrP26040 586 aaKnown RBP12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 1700019A02RikA0A087WPV9 146 aa12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Spag9Q58A65 1321 aaKnown RBP12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Rtf1A2AQ19 715 aaKnown RBP12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Tpm1P58771 284 aa12.41□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Sf3a1Q8K4Z5 791 aaKnown RBP12.4□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Kif16bB1AVY7 1312 aa12.4□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Hmgn5Q9JL35 406 aa12.4□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Rtn4Q99P72 1162 aaKnown RBP12.4□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Rock1P70335 1354 aa12.4□□□□□ -0.42
Col6a5-203ENSMUST00000190193 Tpd52l1O54818 204 aa12.39□□□□□ -0.43
Col6a5-203ENSMUST00000190193 Gripap1Q8VD04 806 aa12.39□□□□□ -0.43
Col6a5-203ENSMUST00000190193 Casq1O09165 405 aa12.39□□□□□ -0.43
Col6a5-203ENSMUST00000190193 Tpm4Q6IRU2 248 aa12.39□□□□□ -0.43
Col6a5-203ENSMUST00000190193 Kif27Q7M6Z4 1394 aa12.38□□□□□ -0.43
Col6a5-203ENSMUST00000190193 Clstn1Q9EPL2 979 aa12.38□□□□□ -0.43
Col6a5-203ENSMUST00000190193 Kif7B7ZNG0 1348 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 57.2 ms