RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 SetQ9EQU5 289 aaKnown RBP9.38□□□□□ -0.91
Nck1-201ENSMUST00000112874 Mkrn3Q60764 544 aa9.37□□□□□ -0.91
Nck1-201ENSMUST00000112874 Spryd3E9Q9B3 442 aa9.36□□□□□ -0.91
Nck1-201ENSMUST00000112874 Ncoa4Q5U4H9 625 aa9.36□□□□□ -0.91
Nck1-201ENSMUST00000112874 Exoc8Q6PGF7 716 aa9.36□□□□□ -0.91
Nck1-201ENSMUST00000112874 Sparcl1P70663 650 aa9.35□□□□□ -0.91
Nck1-201ENSMUST00000112874 Cngb1E1AZ71 1325 aa9.34□□□□□ -0.91
Nck1-201ENSMUST00000112874 Fbln2P37889 1221 aa9.34□□□□□ -0.91
Nck1-201ENSMUST00000112874 Neurod1Q60867 357 aa9.34□□□□□ -0.91
Nck1-201ENSMUST00000112874 Arid4aF8VPQ2 1261 aaKnown RBP9.32□□□□□ -0.92
Nck1-201ENSMUST00000112874 AampJ3QN89 436 aa9.32□□□□□ -0.92
Nck1-201ENSMUST00000112874 Aebp1Q640N1 1128 aa9.32□□□□□ -0.92
Nck1-201ENSMUST00000112874 Ccdc96Q9CR92 584 aa9.32□□□□□ -0.92
Nck1-201ENSMUST00000112874 Fam43bA2AM80 330 aa9.31□□□□□ -0.92
Nck1-201ENSMUST00000112874 Trim41Q5NCC3 630 aa9.31□□□□□ -0.92
Nck1-201ENSMUST00000112874 4933402E13RikQ9D4D2 429 aa9.29□□□□□ -0.92
Nck1-201ENSMUST00000112874 Ipo4Q8VI75 1082 aa9.28□□□□□ -0.92
Nck1-201ENSMUST00000112874 Dok7Q18PE0 504 aa9.26□□□□□ -0.93
Nck1-201ENSMUST00000112874 MafgO54790 162 aa9.26□□□□□ -0.93
Nck1-201ENSMUST00000112874 Rab11fip3Q8CHD8 1047 aa9.25□□□□□ -0.93
Nck1-201ENSMUST00000112874 E2f4Q8R0K9 410 aa9.24□□□□□ -0.93
Nck1-201ENSMUST00000112874 Mfap1aC0HKD8 439 aaKnown RBP9.23□□□□□ -0.93
Nck1-201ENSMUST00000112874 Mfap1bC0HKD9 439 aaKnown RBP9.23□□□□□ -0.93
Nck1-201ENSMUST00000112874 Kiaa1522A2A7S8 1013 aa9.22□□□□□ -0.93
Nck1-201ENSMUST00000112874 Zeb1Q64318 1117 aa9.22□□□□□ -0.93
Nck1-201ENSMUST00000112874 Ggt6Q6PDE7 497 aa9.21□□□□□ -0.93
Nck1-201ENSMUST00000112874 Gm35339A0A140LHH9 1649 aa9.2□□□□□ -0.94
Nck1-201ENSMUST00000112874 MccE9PWI3 1003 aa9.17□□□□□ -0.94
Nck1-201ENSMUST00000112874 Chmp4bQ9D8B3 224 aaKnown RBP9.17□□□□□ -0.94
Nck1-201ENSMUST00000112874 Kcng1A2BDX4 514 aa9.16□□□□□ -0.94
Nck1-201ENSMUST00000112874 Rsph6aQ8CDR2 708 aa9.16□□□□□ -0.94
Nck1-201ENSMUST00000112874 Npm3Q9CPP0 175 aaKnown RBP9.16□□□□□ -0.94
Nck1-201ENSMUST00000112874 TprnA2AI08 749 aaKnown RBP9.15□□□□□ -0.95
Nck1-201ENSMUST00000112874 Lmod3E9QA62 571 aa9.15□□□□□ -0.95
Nck1-201ENSMUST00000112874 Nyap1Q6PFX7 833 aa9.14□□□□□ -0.95
Nck1-201ENSMUST00000112874 Cadps2Q8BYR5 1297 aa9.14□□□□□ -0.95
Nck1-201ENSMUST00000112874 CadpsQ80TJ1 1355 aa9.13□□□□□ -0.95
Nck1-201ENSMUST00000112874 NgefQ8CHT1 710 aa9.13□□□□□ -0.95
Nck1-201ENSMUST00000112874 Pcdh10E9PXQ7 1057 aa9.12□□□□□ -0.95
Nck1-201ENSMUST00000112874 Ankrd13aQ80UP5 588 aa9.12□□□□□ -0.95
Nck1-201ENSMUST00000112874 1700122O11RikJ3QPW6 241 aa9.11□□□□□ -0.95
Nck1-201ENSMUST00000112874 Dnttip2Q8R2M2 758 aaKnown RBP9.11□□□□□ -0.95
Nck1-201ENSMUST00000112874 Clstn1Q9EPL2 979 aa9.11□□□□□ -0.95
Nck1-201ENSMUST00000112874 Sh3bp5Q9Z131 463 aa9.11□□□□□ -0.95
Nck1-201ENSMUST00000112874 Mtmr7Q9Z2C9 660 aa9.11□□□□□ -0.95
Nck1-201ENSMUST00000112874 Fam43aQ8BUP8 424 aa9.1□□□□□ -0.95
Nck1-201ENSMUST00000112874 Stra8P70278 393 aa9.1□□□□□ -0.95
Nck1-201ENSMUST00000112874 Ccdc69Q3TCJ8 202 aa9.1□□□□□ -0.95
Nck1-201ENSMUST00000112874 Kdm4aQ8BW72 1064 aa9.1□□□□□ -0.95
Nck1-201ENSMUST00000112874 Rnf225Q9D7D1 332 aa9.1□□□□□ -0.95
Nck1-201ENSMUST00000112874 Erich6D3Z6S9 713 aa9.08□□□□□ -0.96
Nck1-201ENSMUST00000112874 SnphQ80U23 495 aa9.08□□□□□ -0.96
Nck1-201ENSMUST00000112874 Cwc22Q8C5N3 908 aaKnown RBP9.08□□□□□ -0.96
Nck1-201ENSMUST00000112874 Zc3h4Q6ZPZ3 1304 aaKnown RBP9.07□□□□□ -0.96
Nck1-201ENSMUST00000112874 Gjc2Q8BQU6 440 aa9.07□□□□□ -0.96
Nck1-201ENSMUST00000112874 Themis2Q91YX0 663 aa9.07□□□□□ -0.96
Nck1-201ENSMUST00000112874 Ssr1Q9CY50 286 aaKnown RBP9.07□□□□□ -0.96
Nck1-201ENSMUST00000112874 Gm7544A0A1Y7VJ58 118 aa9.05□□□□□ -0.96
Nck1-201ENSMUST00000112874 BcanQ61361 883 aa9.05□□□□□ -0.96
Nck1-201ENSMUST00000112874 Map3k10Q66L42 940 aa9.05□□□□□ -0.96
Nck1-201ENSMUST00000112874 Polr3glQ8R0C0 218 aa9.05□□□□□ -0.96
Nck1-201ENSMUST00000112874 Ppm1eQ80TL0 749 aa9.05□□□□□ -0.96
Nck1-201ENSMUST00000112874 Dcbld2Q91ZV3 769 aa9.05□□□□□ -0.96
Nck1-201ENSMUST00000112874 2310050C09RikG5E8Z3 280 aa9.04□□□□□ -0.96
Nck1-201ENSMUST00000112874 CanxP35564 591 aaKnown RBP9.04□□□□□ -0.96
Nck1-201ENSMUST00000112874 Aebp2Q9Z248 504 aaKnown RBP9.04□□□□□ -0.96
Nck1-201ENSMUST00000112874 Plekhg3Q4VAC9 1341 aa9.03□□□□□ -0.96
Nck1-201ENSMUST00000112874 MpndQ3TV65 487 aa9.03□□□□□ -0.96
Nck1-201ENSMUST00000112874 Dhx30Q99PU8 1217 aaKnown RBP9.03□□□□□ -0.96
Nck1-201ENSMUST00000112874 Csrnp3P59055 597 aa9.02□□□□□ -0.97
Nck1-201ENSMUST00000112874 NeflP08551 543 aa9.01□□□□□ -0.97
Nck1-201ENSMUST00000112874 Zc3h15Q3TIV5 426 aaKnown RBP9.01□□□□□ -0.97
Nck1-201ENSMUST00000112874 Ppm1gQ61074 542 aa9□□□□□ -0.97
Nck1-201ENSMUST00000112874 Ipo8Q7TMY7 1010 aa9□□□□□ -0.97
Nck1-201ENSMUST00000112874 Klhl34A2AI76 644 aa9□□□□□ -0.97
Nck1-201ENSMUST00000112874 VaspP70460 375 aaKnown RBP9□□□□□ -0.97
Nck1-201ENSMUST00000112874 Zfyve27Q3TXX3 415 aa9□□□□□ -0.97
Nck1-201ENSMUST00000112874 DmtnQ9WV69 405 aa9□□□□□ -0.97
Nck1-201ENSMUST00000112874 Usp35M0QWN7 1009 aa8.99□□□□□ -0.97
Nck1-201ENSMUST00000112874 Secisbp2lQ6A098 1086 aaKnown RBP8.98□□□□□ -0.97
Nck1-201ENSMUST00000112874 Tmco4Q91WU4 631 aa8.98□□□□□ -0.97
Nck1-201ENSMUST00000112874 Ccdc85aQ5SP85 500 aa8.96□□□□□ -0.97
Nck1-201ENSMUST00000112874 Mybpc2Q5XKE0 1136 aa8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 Gtf2e1Q9D0D5 440 aa8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 Speer4f1Q9D5Q6 258 aa8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 Acin1Q9JIX8 1338 aaKnown RBP8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 A0A1Y7VJ07 166 aa8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 Rbm27Q5SFM8 1060 aaKnown RBP8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 Zranb1Q7M760 708 aa8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 Klf15Q9EPW2 415 aa8.95□□□□□ -0.98
Nck1-201ENSMUST00000112874 Myt1lP97500 1187 aa8.93□□□□□ -0.98
Nck1-201ENSMUST00000112874 Mmp14P53690 582 aa8.91□□□□□ -0.98
Nck1-201ENSMUST00000112874 Dnajc2P54103 621 aaKnown RBP8.91□□□□□ -0.98
Nck1-201ENSMUST00000112874 Jade2Q6ZQF7 829 aa8.9□□□□□ -0.98
Nck1-201ENSMUST00000112874 Gimap8Q75N62 688 aa8.9□□□□□ -0.99
Nck1-201ENSMUST00000112874 Skor2A7M7C7 1008 aa8.89□□□□□ -0.99
Nck1-201ENSMUST00000112874 Speer4f2E9Q366 295 aa8.89□□□□□ -0.99
Nck1-201ENSMUST00000112874 TonslQ6NZL6 1363 aa8.88□□□□□ -0.99
Nck1-201ENSMUST00000112874 Gsdma3Q5Y4Y6 464 aa8.88□□□□□ -0.99
Nck1-201ENSMUST00000112874 Ccar1Q8CH18 1146 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms