RNA–Protein interactions for RNA: ENSMUST00000107537.4

Ube3a-201, Transcript of Ubiquitin-protein ligase E3A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ube3a, Length 4,911 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-201ENSMUST00000107537 Arhgap27A2AB59 869 aa17.54■□□□□ 0.4
Ube3a-201ENSMUST00000107537 Mak16Q8BGS0 296 aaKnown RBP17.54■□□□□ 0.4
Ube3a-201ENSMUST00000107537 SlkO54988 1233 aa17.54■□□□□ 0.4
Ube3a-201ENSMUST00000107537 Rassf8Q8CJ96 419 aa17.54■□□□□ 0.4
Ube3a-201ENSMUST00000107537 ChgaP26339 463 aaKnown RBP17.54■□□□□ 0.4
Ube3a-201ENSMUST00000107537 Cluap1Q8R3P7 413 aa17.53■□□□□ 0.4
Ube3a-201ENSMUST00000107537 Rb1cc1Q9ESK9 1588 aa17.53■□□□□ 0.4
Ube3a-201ENSMUST00000107537 Kiaa0754Q69ZZ9 979 aa17.51■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Mia2Q91ZV0 1396 aa17.51■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Nolc1E9Q5C9 702 aaKnown RBP17.51■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Ipo8Q7TMY7 1010 aa17.51■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Kif15Q6P9L6 1387 aa17.5■□□□□ 0.39
Ube3a-201ENSMUST00000107537 CgnP59242 1191 aa17.49■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Gpatch11Q3UFS4 262 aa17.49■□□□□ 0.39
Ube3a-201ENSMUST00000107537 U2surpQ6NV83 1029 aaKnown RBP17.49■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Mfap1aC0HKD8 439 aaKnown RBP17.49■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Mfap1bC0HKD9 439 aaKnown RBP17.49■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Zscan21Q07231 555 aa17.49■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Tmco5bQ80X59 307 aa17.49■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Ecm2Q5FW85 670 aa17.48■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Golga3P55937 1487 aa17.48■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Rundc1Q0VDN7 615 aa17.47■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Sart3Q9JLI8 962 aaKnown RBP17.47■□□□□ 0.39
Ube3a-201ENSMUST00000107537 GorabQ8BRM2 368 aa17.46■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Iffo2Q8R2V2 512 aa17.46■□□□□ 0.39
Ube3a-201ENSMUST00000107537 Pkd2O35245 966 aa17.45■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Ddrgk1Q80WW9 315 aa17.45■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Plin1Q8CGN5 517 aa17.45■□□□□ 0.38
Ube3a-201ENSMUST00000107537 PrkcshO08795 521 aa17.44■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Rsf1E9PWW9 1441 aaKnown RBP17.44■□□□□ 0.38
Ube3a-201ENSMUST00000107537 VgfQ0VGU4 617 aa17.43■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Rtf1A2AQ19 715 aaKnown RBP17.42■□□□□ 0.38
Ube3a-201ENSMUST00000107537 U2af1Q9D883 239 aaKnown RBP17.42■□□□□ 0.38
Ube3a-201ENSMUST00000107537 RdxP26043 583 aaKnown RBP17.41■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Pknox2Q8BG99 474 aa17.41■□□□□ 0.38
Ube3a-201ENSMUST00000107537 CrebrfQ8CDG5 640 aaKnown RBP17.4■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Znf330Q922H9 316 aa17.4■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Map4P27546 1125 aaKnown RBP17.4■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Fhad1A6PWD2 1420 aa17.4■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Pde3bQ61409 1100 aa17.4■□□□□ 0.38
Ube3a-201ENSMUST00000107537 Trim30aP15533 496 aa17.4■□□□□ 0.38
Ube3a-201ENSMUST00000107537 MecomP14404 1042 aa17.38■□□□□ 0.37
Ube3a-201ENSMUST00000107537 Becn1O88597 448 aa17.37■□□□□ 0.37
Ube3a-201ENSMUST00000107537 IbspQ61711 324 aa17.37■□□□□ 0.37
Ube3a-201ENSMUST00000107537 Golga2Q921M4 999 aa17.36■□□□□ 0.37
Ube3a-201ENSMUST00000107537 Tmf1B9EKI3 1091 aa17.36■□□□□ 0.37
Ube3a-201ENSMUST00000107537 Gtf2e1Q9D0D5 440 aa17.35■□□□□ 0.37
Ube3a-201ENSMUST00000107537 Ifit1bl1D3Z6F0 470 aa17.35■□□□□ 0.37
Ube3a-201ENSMUST00000107537 Fbxo2Q80UW2 297 aa17.35■□□□□ 0.37
Ube3a-201ENSMUST00000107537 Q3TQI7 289 aaKnown RBP17.34■□□□□ 0.37
Ube3a-201ENSMUST00000107537 MyclP10166 368 aa17.33■□□□□ 0.36
Ube3a-201ENSMUST00000107537 R3hcc1Q8BSI6 488 aa17.33■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Dcaf11Q91VU6 549 aa17.32■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Tpm3-rs7D3Z2H9 248 aa17.32■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Stk26Q99JT2 416 aa17.31■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Eif4g2Q62448 906 aaKnown RBP17.31■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Ccdc18Q640L5 1455 aa17.3■□□□□ 0.36
Ube3a-201ENSMUST00000107537 CrbnQ8C7D2 445 aa17.3■□□□□ 0.36
Ube3a-201ENSMUST00000107537 SetQ9EQU5 289 aaKnown RBP17.3■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Ush1cQ9ES64 910 aa17.3■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Trak1Q6PD31 939 aa17.3■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Map7d2A2AG50 781 aa17.3■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Birc3O08863 600 aa17.3■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Senp3Q9EP97 568 aaKnown RBP17.29■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Tnnt1O88346 262 aa17.29■□□□□ 0.36
Ube3a-201ENSMUST00000107537 ScribQ80U72 1612 aa17.29■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Cald1E9QA15 768 aaKnown RBP17.29■□□□□ 0.36
Ube3a-201ENSMUST00000107537 4933402E13RikQ9D4D2 429 aa17.28■□□□□ 0.36
Ube3a-201ENSMUST00000107537 Ksr2Q3UVC0 959 aa17.27■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Nol10Q5RJG1 687 aaKnown RBP17.26■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Brpf1B2RRD7 1212 aa17.26■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Mical1Q8VDP3 1048 aa17.25■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Dnai2A2AC93 623 aa17.24■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Cspp1B2RX88 1205 aa17.24■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Smarce1O54941 411 aaKnown RBP17.24■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Podxl2Q8CAE9 603 aa17.24■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Atp6v1dP57746 247 aa17.23■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Mphosph9A6H5Y1 991 aa17.23■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Samd1D3YXK1 519 aa17.23■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Baz1aO88379 1555 aa17.22■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Rsph3aQ3UFY4 516 aa17.21■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Cabp1Q9JLK7 227 aa17.21■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Tomm22Q9CPQ3 142 aa17.21■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Kif27Q7M6Z4 1394 aa17.21■□□□□ 0.35
Ube3a-201ENSMUST00000107537 Kdm5dQ62240 1548 aa17.21■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Tpm3P21107 285 aaKnown RBP17.2■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Ccar1Q8CH18 1146 aaKnown RBP17.2■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Pibf1E9Q6K3 756 aa17.2■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Plcd4Q8K3R3 807 aa17.2■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Sf3a1Q8K4Z5 791 aaKnown RBP17.2■□□□□ 0.34
Ube3a-201ENSMUST00000107537 CntlnA2AM05 1397 aa17.2■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Ccer1Q9CQL2 403 aa17.2■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Srcin1Q9QWI6 1250 aa17.19■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Spag9Q58A65 1321 aaKnown RBP17.19■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Ccdc146E9Q9F7 977 aa17.18■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Mre11Q61216 706 aa17.18■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Chmp3Q9CQ10 224 aa17.17■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Rfx1P48377 963 aa17.16■□□□□ 0.34
Ube3a-201ENSMUST00000107537 Slc4a1apE9PX68 744 aa17.14■□□□□ 0.33
Ube3a-201ENSMUST00000107537 Eif2s2Q99L45 331 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms