RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Zeb1Q64318 1117 aa14.72□□□□□ -0.05
Scn8a-202ENSMUST00000096198 OvosQ3UU35 1456 aa14.68□□□□□ -0.06
Scn8a-202ENSMUST00000096198 Bcl11bQ99PV8 884 aa14.67□□□□□ -0.06
Scn8a-202ENSMUST00000096198 Rrbp1Q99PL5 1605 aaKnown RBP14.66□□□□□ -0.06
Scn8a-202ENSMUST00000096198 4930407I10RikD3Z5T8 1512 aa14.65□□□□□ -0.06
Scn8a-202ENSMUST00000096198 Gli3Q61602 1583 aa14.64□□□□□ -0.07
Scn8a-202ENSMUST00000096198 Topaz1E5FYH1 1653 aa14.63□□□□□ -0.07
Scn8a-202ENSMUST00000096198 Synj2Q9D2G5 1434 aa14.63□□□□□ -0.07
Scn8a-202ENSMUST00000096198 WrnO09053 1401 aa14.62□□□□□ -0.07
Scn8a-202ENSMUST00000096198 Yeats2Q3TUF7 1407 aa14.61□□□□□ -0.07
Scn8a-202ENSMUST00000096198 Polr1aO35134 1717 aaKnown RBP14.58□□□□□ -0.07
Scn8a-202ENSMUST00000096198 Gm7298A0A0N4SVU1 1476 aa14.57□□□□□ -0.08
Scn8a-202ENSMUST00000096198 Cul9Q80TT8 1865 aa14.57□□□□□ -0.08
Scn8a-202ENSMUST00000096198 NpatQ8BMA5 1420 aa14.56□□□□□ -0.08
Scn8a-202ENSMUST00000096198 Arhgef40Q3UPH7 1517 aa14.55□□□□□ -0.08
Scn8a-202ENSMUST00000096198 Cypt2Q6P924 180 aa14.5□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Zranb1Q7M760 708 aa14.5□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Abca9Q8K449 1623 aa14.5□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Gemin5Q8BX17 1502 aaKnown RBP14.5□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Arhgap31A6X8Z5 1425 aa14.48□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Med1Q925J9 1575 aa14.47□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Slit2Q9R1B9 1521 aa14.47□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Kiaa0556Q8C753 1610 aa14.47□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Mlh3A0A1Y7VMP7 1443 aa14.47□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Ptch1Q61115 1434 aa14.47□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Gcc2Q8CHG3 1679 aa14.46□□□□□ -0.09
Scn8a-202ENSMUST00000096198 Mroh2aD3Z750 1679 aa14.44□□□□□ -0.1
Scn8a-202ENSMUST00000096198 Abca6Q8K441 1624 aa14.44□□□□□ -0.1
Scn8a-202ENSMUST00000096198 Nyap1Q6PFX7 833 aa14.42□□□□□ -0.1
Scn8a-202ENSMUST00000096198 Cfap65Q3V0B4 1847 aa14.42□□□□□ -0.1
Scn8a-202ENSMUST00000096198 Ccdc141E9Q8Q6 1531 aa14.41□□□□□ -0.1
Scn8a-202ENSMUST00000096198 Dip2bQ3UH60 1574 aa14.4□□□□□ -0.1
Scn8a-202ENSMUST00000096198 AlkP97793 1621 aa14.4□□□□□ -0.1
Scn8a-202ENSMUST00000096198 Rapgef6Q5NCJ1 1609 aa14.39□□□□□ -0.11
Scn8a-202ENSMUST00000096198 Dip2cE9PWR4 1557 aa14.37□□□□□ -0.11
Scn8a-202ENSMUST00000096198 Arhgap23Q69ZH9 1483 aa14.37□□□□□ -0.11
Scn8a-202ENSMUST00000096198 Myom2Q14BI5 1463 aa14.36□□□□□ -0.11
Scn8a-202ENSMUST00000096198 Zmym4A2A791 1549 aaKnown RBP14.36□□□□□ -0.11
Scn8a-202ENSMUST00000096198 Prex2Q3LAC4 1598 aa14.34□□□□□ -0.11
Scn8a-202ENSMUST00000096198 Hecw1Q8K4P8 1604 aa14.33□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Phlpp1Q8CHE4 1687 aa14.33□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Talpid3E9PV87 1520 aa14.32□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Mroh2bQ7M6Y6 1581 aa14.32□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Rims2Q9EQZ7 1530 aa14.31□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Afap1Q80YS6 731 aa14.31□□□□□ -0.12
Scn8a-202ENSMUST00000096198 RereQ80TZ9 1558 aa14.3□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Rapgefl1Q68EF8 662 aa14.29□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Fancd2Q80V62 1450 aa14.29□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Kiaa1210E9Q0C6 1637 aa14.28□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Zc3h13E9Q784 1729 aaKnown RBP14.28□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Rapgef3Q8VCC8 918 aa14.28□□□□□ -0.12
Scn8a-202ENSMUST00000096198 NinlQ6ZQ12 1394 aa14.27□□□□□ -0.12
Scn8a-202ENSMUST00000096198 Rgs17Q9QZB0 210 aa14.26□□□□□ -0.13
Scn8a-202ENSMUST00000096198 Dennd4bQ3U1Y4 1499 aa14.24□□□□□ -0.13
Scn8a-202ENSMUST00000096198 Rimbp3Q3V0F0 1606 aa14.23□□□□□ -0.13
Scn8a-202ENSMUST00000096198 Ncapd3Q6ZQK0 1506 aa14.23□□□□□ -0.13
Scn8a-202ENSMUST00000096198 MpndQ3TV65 487 aa14.22□□□□□ -0.13
Scn8a-202ENSMUST00000096198 Ankrd26Q811D2 1581 aa14.22□□□□□ -0.13
Scn8a-202ENSMUST00000096198 Carmil1Q6EDY6 1374 aa14.2□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Scaf11E9PZM7 1456 aaKnown RBP14.18□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Kdm2bQ6P1G2 1309 aa14.18□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Kdm3bQ6ZPY7 1562 aa14.17□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Lemd3Q9WU40 921 aa14.17□□□□□ -0.14
Scn8a-202ENSMUST00000096198 PzpQ61838 1495 aa14.17□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Tom1O88746 492 aa14.16□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Map3k1P53349 1493 aa14.16□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Cux1P53564 1515 aa14.15□□□□□ -0.14
Scn8a-202ENSMUST00000096198 Kdm5cP41230 1554 aa14.13□□□□□ -0.15
Scn8a-202ENSMUST00000096198 Sema6bO54951 886 aa14.12□□□□□ -0.15
Scn8a-202ENSMUST00000096198 Erich3F6QRE9 1637 aa14.12□□□□□ -0.15
Scn8a-202ENSMUST00000096198 Tubgcp6G5E8P0 1769 aa14.11□□□□□ -0.15
Scn8a-202ENSMUST00000096198 Amigo3Q8C2S7 508 aa14.11□□□□□ -0.15
Scn8a-202ENSMUST00000096198 Bcl9Q9D219 1425 aa14.11□□□□□ -0.15
Scn8a-202ENSMUST00000096198 DnmbpQ6TXD4 1580 aa14.1□□□□□ -0.15
Scn8a-202ENSMUST00000096198 Kidins220E9Q9B7 1793 aa14.09□□□□□ -0.15
Scn8a-202ENSMUST00000096198 CltcQ68FD5 1675 aaKnown RBP14.09□□□□□ -0.15
Scn8a-202ENSMUST00000096198 Arap1Q4LDD4 1452 aa14.08□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Magi1Q6RHR9 1471 aa14.07□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Fnbp4Q6ZQ03 1031 aa14.07□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Npm2Q80W85 207 aa14.07□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Adgrb2Q8CGM1 1561 aa14.07□□□□□ -0.16
Scn8a-202ENSMUST00000096198 BlmO88700 1416 aa14.07□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Trpm2Q91YD4 1506 aa14.05□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Dmrt2Q8BG36 561 aa14.05□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Ncoa2Q61026 1462 aa14.04□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Nhsl1Q8CAF4 1587 aa14.04□□□□□ -0.16
Scn8a-202ENSMUST00000096198 GphnQ8BUV3 769 aaKnown RBP14.03□□□□□ -0.16
Scn8a-202ENSMUST00000096198 Cntnap1O54991 1385 aa14.01□□□□□ -0.17
Scn8a-202ENSMUST00000096198 RictorQ6QI06 1708 aa14□□□□□ -0.17
Scn8a-202ENSMUST00000096198 Knl1Q66JQ7 1612 aa13.99□□□□□ -0.17
Scn8a-202ENSMUST00000096198 Fam208aQ69ZR9 1610 aaKnown RBP13.98□□□□□ -0.17
Scn8a-202ENSMUST00000096198 Slc5a4bQ91ZP4 660 aa13.98□□□□□ -0.17
Scn8a-202ENSMUST00000096198 MypopQ8R4U1 393 aa13.97□□□□□ -0.17
Scn8a-202ENSMUST00000096198 Robo1O89026 1612 aa13.97□□□□□ -0.17
Scn8a-202ENSMUST00000096198 Arhgap5P97393 1501 aa13.96□□□□□ -0.17
Scn8a-202ENSMUST00000096198 Pik3c2aQ61194 1686 aa13.96□□□□□ -0.17
Scn8a-202ENSMUST00000096198 DroshaQ5HZJ0 1373 aaKnown RBP13.96□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Iqgap1Q9JKF1 1657 aaKnown RBP13.95□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Cdk13Q69ZA1 1511 aaKnown RBP13.95□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Kif21bQ9QXL1 1668 aa13.95□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms