RNA–Protein interactions for RNA: ENSMUST00000089912.11

Casc4-202, Transcript of Protein CASC4, mousemouse

TSL 1 (best) BASIC

Gene Casc4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-202ENSMUST00000089912 Egfem1Q8C088 590 aa17.68■□□□□ 0.42
Casc4-202ENSMUST00000089912 Frmpd1A2AKB4 1549 aa17.68■□□□□ 0.42
Casc4-202ENSMUST00000089912 Gm7298A0A0N4SVU1 1476 aa17.67■□□□□ 0.42
Casc4-202ENSMUST00000089912 Grin2bQ01097 1482 aa17.66■□□□□ 0.42
Casc4-202ENSMUST00000089912 Gtf3c3Q3TMP1 882 aa17.66■□□□□ 0.42
Casc4-202ENSMUST00000089912 Naip5Q9R016 1403 aa17.66■□□□□ 0.42
Casc4-202ENSMUST00000089912 Ipo9Q91YE6 1041 aa17.66■□□□□ 0.42
Casc4-202ENSMUST00000089912 Rad54l2Q99NG0 1466 aa17.66■□□□□ 0.42
Casc4-202ENSMUST00000089912 A2mQ6GQT1 1474 aa17.66■□□□□ 0.42
Casc4-202ENSMUST00000089912 Naip2Q9QUK4 1447 aa17.65■□□□□ 0.42
Casc4-202ENSMUST00000089912 Ercc6F8VPZ5 1481 aa17.64■□□□□ 0.41
Casc4-202ENSMUST00000089912 Polr3glQ8R0C0 218 aa17.64■□□□□ 0.41
Casc4-202ENSMUST00000089912 Map3k1P53349 1493 aa17.63■□□□□ 0.41
Casc4-202ENSMUST00000089912 Irx3P81067 507 aa17.62■□□□□ 0.41
Casc4-202ENSMUST00000089912 PnisrA2AJT4 805 aaKnown RBP17.62■□□□□ 0.41
Casc4-202ENSMUST00000089912 Neurod2Q62414 383 aa17.62■□□□□ 0.41
Casc4-202ENSMUST00000089912 Camsap1A2AHC3 1581 aa17.61■□□□□ 0.41
Casc4-202ENSMUST00000089912 Ecm2Q5FW85 670 aa17.6■□□□□ 0.41
Casc4-202ENSMUST00000089912 Q7TT23 1179 aa17.6■□□□□ 0.41
Casc4-202ENSMUST00000089912 Rpgrip1lQ8CG73 1264 aa17.6■□□□□ 0.41
Casc4-202ENSMUST00000089912 4930567H17RikQ3V0K5 233 aa17.58■□□□□ 0.41
Casc4-202ENSMUST00000089912 Mtus2Q3UHD3 1353 aa17.58■□□□□ 0.4
Casc4-202ENSMUST00000089912 LrpprcQ6PB66 1392 aaKnown RBP17.57■□□□□ 0.4
Casc4-202ENSMUST00000089912 Dhx9O70133 1380 aaKnown RBP17.57■□□□□ 0.4
Casc4-202ENSMUST00000089912 Spryd3E9Q9B3 442 aa17.57■□□□□ 0.4
Casc4-202ENSMUST00000089912 Armcx1Q9CX83 456 aa17.57■□□□□ 0.4
Casc4-202ENSMUST00000089912 Efcab5A0JP43 1406 aa17.56■□□□□ 0.4
Casc4-202ENSMUST00000089912 CrbnQ8C7D2 445 aa17.56■□□□□ 0.4
Casc4-202ENSMUST00000089912 Trim26Q99PN3 545 aa17.54■□□□□ 0.4
Casc4-202ENSMUST00000089912 Trim30dE9PWL0 497 aa17.54■□□□□ 0.4
Casc4-202ENSMUST00000089912 Ncoa2Q61026 1462 aa17.53■□□□□ 0.4
Casc4-202ENSMUST00000089912 Kdm2aP59997 1161 aa17.53■□□□□ 0.4
Casc4-202ENSMUST00000089912 Cwc22Q8C5N3 908 aaKnown RBP17.53■□□□□ 0.4
Casc4-202ENSMUST00000089912 Dapk1Q80YE7 1442 aa17.53■□□□□ 0.4
Casc4-202ENSMUST00000089912 TnnQ80Z71 1560 aa17.5■□□□□ 0.39
Casc4-202ENSMUST00000089912 Gm1043A0A140LJC2 1431 aa17.49■□□□□ 0.39
Casc4-202ENSMUST00000089912 Esx1O88933 382 aa17.49■□□□□ 0.39
Casc4-202ENSMUST00000089912 Zfp444Q3TDV8 331 aaKnown RBP17.49■□□□□ 0.39
Casc4-202ENSMUST00000089912 Arid4bA2CG63 1314 aaKnown RBP17.48■□□□□ 0.39
Casc4-202ENSMUST00000089912 Zscan21Q07231 555 aa17.48■□□□□ 0.39
Casc4-202ENSMUST00000089912 Duox2A2AQ99 1517 aa17.48■□□□□ 0.39
Casc4-202ENSMUST00000089912 Nlrp6Q91WS2 869 aa17.48■□□□□ 0.39
Casc4-202ENSMUST00000089912 Sart3Q9JLI8 962 aaKnown RBP17.47■□□□□ 0.39
Casc4-202ENSMUST00000089912 Ncoa1P70365 1447 aa17.47■□□□□ 0.39
Casc4-202ENSMUST00000089912 Iqcf3Q9D498 203 aa17.46■□□□□ 0.39
Casc4-202ENSMUST00000089912 Lamc3Q9R0B6 1581 aa17.46■□□□□ 0.39
Casc4-202ENSMUST00000089912 Map4P27546 1125 aaKnown RBP17.46■□□□□ 0.39
Casc4-202ENSMUST00000089912 Mak16Q8BGS0 296 aaKnown RBP17.45■□□□□ 0.38
Casc4-202ENSMUST00000089912 Rrp7aQ9D1C9 280 aaKnown RBP17.44■□□□□ 0.38
Casc4-202ENSMUST00000089912 Inpp5dQ9ES52 1191 aa17.44■□□□□ 0.38
Casc4-202ENSMUST00000089912 Ifit1bl1D3Z6F0 470 aa17.43■□□□□ 0.38
Casc4-202ENSMUST00000089912 Chmp5Q9D7S9 219 aa17.43■□□□□ 0.38
Casc4-202ENSMUST00000089912 Ttll13A4Q9F6 804 aa17.42■□□□□ 0.38
Casc4-202ENSMUST00000089912 Wdr62Q3U3T8 1523 aa17.42■□□□□ 0.38
Casc4-202ENSMUST00000089912 Ift140E9PY46 1464 aa17.42■□□□□ 0.38
Casc4-202ENSMUST00000089912 Plekhh2Q8C115 1491 aa17.42■□□□□ 0.38
Casc4-202ENSMUST00000089912 Ttll5Q8CHB8 1328 aa17.41■□□□□ 0.38
Casc4-202ENSMUST00000089912 Pank3Q8R2W9 370 aa17.4■□□□□ 0.38
Casc4-202ENSMUST00000089912 Urb2E9Q7L1 1524 aaKnown RBP17.39■□□□□ 0.37
Casc4-202ENSMUST00000089912 Hsp90ab1P11499 724 aaKnown RBP17.39■□□□□ 0.37
Casc4-202ENSMUST00000089912 Cnga1P29974 684 aa17.39■□□□□ 0.37
Casc4-202ENSMUST00000089912 WrnO09053 1401 aa17.38■□□□□ 0.37
Casc4-202ENSMUST00000089912 Erbb3Q61526 1339 aa17.38■□□□□ 0.37
Casc4-202ENSMUST00000089912 Ccdc9Q8VC31 543 aaKnown RBP17.37■□□□□ 0.37
Casc4-202ENSMUST00000089912 Speer4f1Q9D5Q6 258 aa17.35■□□□□ 0.37
Casc4-202ENSMUST00000089912 NexmifQ5DTT1 1515 aa17.35■□□□□ 0.37
Casc4-202ENSMUST00000089912 Erich3F6QRE9 1637 aa17.35■□□□□ 0.37
Casc4-202ENSMUST00000089912 PogzQ8BZH4 1409 aaKnown RBP17.34■□□□□ 0.37
Casc4-202ENSMUST00000089912 Eif2s2Q99L45 331 aaKnown RBP17.34■□□□□ 0.37
Casc4-202ENSMUST00000089912 Vsig10D3YX43 558 aa17.34■□□□□ 0.37
Casc4-202ENSMUST00000089912 Dnai1Q8C0M8 701 aa17.33■□□□□ 0.37
Casc4-202ENSMUST00000089912 Slc4a1apE9PX68 744 aa17.33■□□□□ 0.36
Casc4-202ENSMUST00000089912 Tdrd9Q14BI7 1383 aa17.32■□□□□ 0.36
Casc4-202ENSMUST00000089912 Nup155Q99P88 1391 aaKnown RBP17.32■□□□□ 0.36
Casc4-202ENSMUST00000089912 Phldb1Q6PDH0 1371 aaKnown RBP17.32■□□□□ 0.36
Casc4-202ENSMUST00000089912 Mroh3A0A1D5RM54 893 aa17.32■□□□□ 0.36
Casc4-202ENSMUST00000089912 Dennd4bQ3U1Y4 1499 aa17.32■□□□□ 0.36
Casc4-202ENSMUST00000089912 Abcc5Q9R1X5 1436 aa17.31■□□□□ 0.36
Casc4-202ENSMUST00000089912 Lmo7E9PYF4 1699 aaKnown RBP17.31■□□□□ 0.36
Casc4-202ENSMUST00000089912 Mug1P28665 1476 aa17.31■□□□□ 0.36
Casc4-202ENSMUST00000089912 Gm6268A2A3U9 297 aa17.3■□□□□ 0.36
Casc4-202ENSMUST00000089912 CadpsQ80TJ1 1355 aa17.3■□□□□ 0.36
Casc4-202ENSMUST00000089912 Rwdd1Q9CQK7 243 aa17.29■□□□□ 0.36
Casc4-202ENSMUST00000089912 Soga1E1U8D0 1418 aa17.29■□□□□ 0.36
Casc4-202ENSMUST00000089912 Crocc2F6XLV1 1638 aa17.28■□□□□ 0.36
Casc4-202ENSMUST00000089912 Senp3Q9EP97 568 aaKnown RBP17.28■□□□□ 0.36
Casc4-202ENSMUST00000089912 Rprd2Q6NXI6 1469 aaKnown RBP17.28■□□□□ 0.36
Casc4-202ENSMUST00000089912 Samd9lQ69Z37 1561 aa17.27■□□□□ 0.36
Casc4-202ENSMUST00000089912 EprsQ8CGC7 1512 aaKnown RBP17.27■□□□□ 0.36
Casc4-202ENSMUST00000089912 Znf692Q3U381 531 aa17.27■□□□□ 0.36
Casc4-202ENSMUST00000089912 Thoc2B1AZI6 1594 aaKnown RBP17.27■□□□□ 0.35
Casc4-202ENSMUST00000089912 BC005561E9Q5E2 1589 aa17.27■□□□□ 0.35
Casc4-202ENSMUST00000089912 Prkrip1Q9CWV6 186 aaKnown RBP17.26■□□□□ 0.35
Casc4-202ENSMUST00000089912 EspnQ9ET47 871 aa17.26■□□□□ 0.35
Casc4-202ENSMUST00000089912 Plekhg5Q66T02 1073 aa17.25■□□□□ 0.35
Casc4-202ENSMUST00000089912 Gpatch8A2A6A1 1505 aa17.24■□□□□ 0.35
Casc4-202ENSMUST00000089912 Cluap1Q8R3P7 413 aa17.23■□□□□ 0.35
Casc4-202ENSMUST00000089912 Dhx57Q6P5D3 1388 aaKnown RBP17.23■□□□□ 0.35
Casc4-202ENSMUST00000089912 NudcO35685 332 aaKnown RBP17.22■□□□□ 0.35
Casc4-202ENSMUST00000089912 Fgd1P52734 960 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms