RNA–Protein interactions for RNA: ENSMUST00000089752.10

Chd8-201, Transcript of Chromodomain-helicase-DNA-binding protein 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd8, Length 8,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8-201ENSMUST00000089752 Dydc1Q9D9T0 175 aa10.5□□□□□ -0.73
Chd8-201ENSMUST00000089752 Sept11Q8C1B7 431 aaKnown RBP10.49□□□□□ -0.73
Chd8-201ENSMUST00000089752 OptnQ8K3K8 584 aa10.49□□□□□ -0.73
Chd8-201ENSMUST00000089752 Pcmtd1P59913 357 aa10.48□□□□□ -0.73
Chd8-201ENSMUST00000089752 Mns1Q61884 491 aa10.48□□□□□ -0.73
Chd8-201ENSMUST00000089752 Smc2Q8CG48 1191 aaKnown RBP10.48□□□□□ -0.73
Chd8-201ENSMUST00000089752 Sept6Q9R1T4 434 aa10.48□□□□□ -0.73
Chd8-201ENSMUST00000089752 EzrP26040 586 aaKnown RBP10.48□□□□□ -0.73
Chd8-201ENSMUST00000089752 Mex3cQ05A36 652 aaKnown RBP10.47□□□□□ -0.73
Chd8-201ENSMUST00000089752 Chmp4cQ9D7F7 232 aa10.47□□□□□ -0.73
Chd8-201ENSMUST00000089752 Pmfbp1Q9WVQ0 1022 aa10.47□□□□□ -0.73
Chd8-201ENSMUST00000089752 Gcom1E9PZ54 550 aa10.47□□□□□ -0.73
Chd8-201ENSMUST00000089752 MyzapQ3UIJ9 466 aa10.47□□□□□ -0.73
Chd8-201ENSMUST00000089752 Paf1Q8K2T8 535 aa10.47□□□□□ -0.73
Chd8-201ENSMUST00000089752 Stk11ipQ3TAA7 1072 aa10.46□□□□□ -0.73
Chd8-201ENSMUST00000089752 Fez1Q8K0X8 392 aa10.46□□□□□ -0.73
Chd8-201ENSMUST00000089752 Ccdc173A0JLY1 547 aa10.46□□□□□ -0.74
Chd8-201ENSMUST00000089752 Ppfibp2O35711 882 aa10.46□□□□□ -0.74
Chd8-201ENSMUST00000089752 4933428M09RikQ9D3X3 192 aa10.46□□□□□ -0.74
Chd8-201ENSMUST00000089752 Sparcl1P70663 650 aa10.46□□□□□ -0.74
Chd8-201ENSMUST00000089752 4921530L21RikQ9CQ47 274 aa10.46□□□□□ -0.74
Chd8-201ENSMUST00000089752 Gm13697A2AK42 830 aa10.45□□□□□ -0.74
Chd8-201ENSMUST00000089752 Hmgn5Q9JL35 406 aa10.45□□□□□ -0.74
Chd8-201ENSMUST00000089752 Eif4g2Q62448 906 aaKnown RBP10.45□□□□□ -0.74
Chd8-201ENSMUST00000089752 Ccdc83Q9D4V3 305 aa10.45□□□□□ -0.74
Chd8-201ENSMUST00000089752 Hook1Q8BIL5 728 aa10.44□□□□□ -0.74
Chd8-201ENSMUST00000089752 Ppargc1bQ8VHJ7 1014 aa10.44□□□□□ -0.74
Chd8-201ENSMUST00000089752 NudcO35685 332 aaKnown RBP10.44□□□□□ -0.74
Chd8-201ENSMUST00000089752 Rabep1O35551 862 aa10.44□□□□□ -0.74
Chd8-201ENSMUST00000089752 Rsph3aQ3UFY4 516 aa10.43□□□□□ -0.74
Chd8-201ENSMUST00000089752 Prm3Q62100 101 aa10.43□□□□□ -0.74
Chd8-201ENSMUST00000089752 Gm38655A0A286YDK6 273 aa10.43□□□□□ -0.74
Chd8-201ENSMUST00000089752 Pnmal2G3X9N3 661 aa10.43□□□□□ -0.74
Chd8-201ENSMUST00000089752 Mapk8ip3Q9ESN9 1337 aa10.43□□□□□ -0.74
Chd8-201ENSMUST00000089752 Anapc15P60007 132 aa10.42□□□□□ -0.74
Chd8-201ENSMUST00000089752 Lmod2Q3UHZ5 550 aa10.42□□□□□ -0.74
Chd8-201ENSMUST00000089752 Hoxa7P02830 229 aa10.41□□□□□ -0.74
Chd8-201ENSMUST00000089752 Gm6268A2A3U9 297 aa10.41□□□□□ -0.74
Chd8-201ENSMUST00000089752 NaspQ99MD9 773 aaKnown RBP10.41□□□□□ -0.74
Chd8-201ENSMUST00000089752 EspnQ9ET47 871 aa10.4□□□□□ -0.74
Chd8-201ENSMUST00000089752 Gtf2a1Q99PM3 378 aa10.4□□□□□ -0.74
Chd8-201ENSMUST00000089752 Rnf20Q5DTM8 973 aa10.4□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ddx46Q569Z5 1032 aaKnown RBP10.4□□□□□ -0.75
Chd8-201ENSMUST00000089752 Mrs2Q5NCE8 434 aa10.39□□□□□ -0.75
Chd8-201ENSMUST00000089752 Iqcf3Q9D498 203 aa10.39□□□□□ -0.75
Chd8-201ENSMUST00000089752 Cfap57Q9D180 1249 aa10.39□□□□□ -0.75
Chd8-201ENSMUST00000089752 Clstn2Q9ER65 966 aa10.39□□□□□ -0.75
Chd8-201ENSMUST00000089752 NischQ80TM9 1593 aa10.38□□□□□ -0.75
Chd8-201ENSMUST00000089752 Erlin2Q8BFZ9 340 aa10.38□□□□□ -0.75
Chd8-201ENSMUST00000089752 Mre11Q61216 706 aa10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ctr9Q62018 1173 aaKnown RBP10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ofd1Q80Z25 1017 aa10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ccar1Q8CH18 1146 aaKnown RBP10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 HmmrQ00547 794 aaKnown RBP10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 IqcgQ80W32 419 aa10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 Acbd3Q8BMP6 525 aa10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 StambpQ9CQ26 424 aa10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ccdc47Q9D024 483 aaKnown RBP10.37□□□□□ -0.75
Chd8-201ENSMUST00000089752 Gbp4Q61107 620 aa10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 Isy1Q69ZQ2 285 aaKnown RBP10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 Sh3bp5Q9Z131 463 aa10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ssr1Q9CY50 286 aaKnown RBP10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ap3b1Q9Z1T1 1105 aa10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 Fam107bQ3TGF2 131 aa10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 Gpatch11Q3UFS4 262 aa10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 Ipo8Q7TMY7 1010 aa10.36□□□□□ -0.75
Chd8-201ENSMUST00000089752 TchpQ3TVW5 497 aa10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 Srek1Q8BZX4 494 aaKnown RBP10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 AampJ3QN89 436 aa10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 Cdkn1cP49919 348 aa10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 Tex35Q14BK3 207 aa10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 Tex13c2A0A0G2JGA3 530 aa10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 Sall2Q9QX96 1004 aa10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 Zrsr1Q64707 428 aa10.35□□□□□ -0.75
Chd8-201ENSMUST00000089752 Gm13695A2AK44 830 aa10.34□□□□□ -0.75
Chd8-201ENSMUST00000089752 Cwc22Q8C5N3 908 aaKnown RBP10.34□□□□□ -0.75
Chd8-201ENSMUST00000089752 Hnrnpul2Q00PI9 745 aaKnown RBP10.34□□□□□ -0.75
Chd8-201ENSMUST00000089752 Rad21Q61550 635 aaKnown RBP10.34□□□□□ -0.75
Chd8-201ENSMUST00000089752 Tpd52l1O54818 204 aa10.33□□□□□ -0.76
Chd8-201ENSMUST00000089752 Fez2Q6TYB5 348 aa10.33□□□□□ -0.76
Chd8-201ENSMUST00000089752 Odf2A3KGV1 830 aaKnown RBP10.33□□□□□ -0.76
Chd8-201ENSMUST00000089752 AcrbpQ3V140 540 aa10.33□□□□□ -0.76
Chd8-201ENSMUST00000089752 U2surpQ6NV83 1029 aaKnown RBP10.33□□□□□ -0.76
Chd8-201ENSMUST00000089752 Necab1Q8BG18 352 aa10.33□□□□□ -0.76
Chd8-201ENSMUST00000089752 Arid4aF8VPQ2 1261 aaKnown RBP10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 Spryd3E9Q9B3 442 aa10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 Mcm3P25206 812 aaKnown RBP10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 Rtn4Q99P72 1162 aaKnown RBP10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 Mapk8ip2Q9ERE9 830 aa10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 Sart3Q9JLI8 962 aaKnown RBP10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 TxlnbQ8VBT1 685 aa10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 Sf3a1Q8K4Z5 791 aaKnown RBP10.32□□□□□ -0.76
Chd8-201ENSMUST00000089752 Rtf1A2AQ19 715 aaKnown RBP10.31□□□□□ -0.76
Chd8-201ENSMUST00000089752 Cdr1E9Q0B4 517 aa10.31□□□□□ -0.76
Chd8-201ENSMUST00000089752 Iffo2Q8R2V2 512 aa10.31□□□□□ -0.76
Chd8-201ENSMUST00000089752 Chic1Q8CBW7 227 aa10.31□□□□□ -0.76
Chd8-201ENSMUST00000089752 St18Q80TY4 1045 aa10.3□□□□□ -0.76
Chd8-201ENSMUST00000089752 Gabpb2P81069 414 aa10.3□□□□□ -0.76
Chd8-201ENSMUST00000089752 Suds3Q8BR65 328 aa10.3□□□□□ -0.76
Chd8-201ENSMUST00000089752 Skor2A7M7C7 1008 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 66.8 ms