RNA–Protein interactions for RNA: ENSMUST00000089752.10

Chd8-201, Transcript of Chromodomain-helicase-DNA-binding protein 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chd8, Length 8,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8-201ENSMUST00000089752 Cngb1E1AZ71 1325 aa14.51□□□□□ -0.09
Chd8-201ENSMUST00000089752 Rpgrip1Q9EPQ2 1331 aa14.4□□□□□ -0.1
Chd8-201ENSMUST00000089752 Pelp1Q9DBD5 1123 aaKnown RBP14.34□□□□□ -0.11
Chd8-201ENSMUST00000089752 Las1lA2BE28 776 aaKnown RBP14.32□□□□□ -0.12
Chd8-201ENSMUST00000089752 Wdr66E9Q743 1299 aa13.76□□□□□ -0.21
Chd8-201ENSMUST00000089752 4930567H17RikQ3V0K5 233 aa13.69□□□□□ -0.22
Chd8-201ENSMUST00000089752 Myt1Q8CFC2 1127 aa13.64□□□□□ -0.23
Chd8-201ENSMUST00000089752 Amer1Q7TS75 1132 aa13.58□□□□□ -0.24
Chd8-201ENSMUST00000089752 CenpbP27790 599 aa13.22□□□□□ -0.29
Chd8-201ENSMUST00000089752 Rhox8Q6VSS7 320 aa13.05□□□□□ -0.32
Chd8-201ENSMUST00000089752 Stra8P70278 393 aa12.92□□□□□ -0.34
Chd8-201ENSMUST00000089752 Rtl5Q5DTT4 599 aa12.85□□□□□ -0.35
Chd8-201ENSMUST00000089752 Ythdc1E9Q5K9 736 aaKnown RBP12.75□□□□□ -0.37
Chd8-201ENSMUST00000089752 4933416C03RikQ3V063 378 aa12.58□□□□□ -0.4
Chd8-201ENSMUST00000089752 DiexfQ8BTT6 772 aaKnown RBP12.56□□□□□ -0.4
Chd8-201ENSMUST00000089752 Zeb1Q64318 1117 aa12.55□□□□□ -0.4
Chd8-201ENSMUST00000089752 Tnnt3Q9QZ47 272 aa12.47□□□□□ -0.41
Chd8-201ENSMUST00000089752 Rtl1Q7M732 1744 aa12.4□□□□□ -0.43
Chd8-201ENSMUST00000089752 Ttbk1Q6PCN3 1308 aa12.32□□□□□ -0.44
Chd8-201ENSMUST00000089752 Myt1lP97500 1187 aa12.32□□□□□ -0.44
Chd8-201ENSMUST00000089752 NefmP08553 848 aa12.27□□□□□ -0.45
Chd8-201ENSMUST00000089752 NeflP08551 543 aa12.24□□□□□ -0.45
Chd8-201ENSMUST00000089752 Ccdc9Q8VC31 543 aaKnown RBP12.19□□□□□ -0.46
Chd8-201ENSMUST00000089752 Ube2uB1AUC4 352 aa12.15□□□□□ -0.46
Chd8-201ENSMUST00000089752 Anp32bQ9EST5 272 aaKnown RBP12.07□□□□□ -0.48
Chd8-201ENSMUST00000089752 Cdk11bP24788 784 aaKnown RBP12.07□□□□□ -0.48
Chd8-201ENSMUST00000089752 Acin1Q9JIX8 1338 aaKnown RBP12.07□□□□□ -0.48
Chd8-201ENSMUST00000089752 Ccdc180J3QNE4 1664 aa12.02□□□□□ -0.48
Chd8-201ENSMUST00000089752 CatipB9EKE5 520 aa12.01□□□□□ -0.49
Chd8-201ENSMUST00000089752 Ehmt2Q9Z148 1263 aaKnown RBP11.95□□□□□ -0.5
Chd8-201ENSMUST00000089752 HrcG5E8J6 738 aa11.94□□□□□ -0.5
Chd8-201ENSMUST00000089752 Neurod1Q60867 357 aa11.91□□□□□ -0.5
Chd8-201ENSMUST00000089752 NrdcQ8BHG1 1161 aa11.9□□□□□ -0.5
Chd8-201ENSMUST00000089752 Polr3glQ8R0C0 218 aa11.87□□□□□ -0.51
Chd8-201ENSMUST00000089752 Anp32aO35381 247 aa11.84□□□□□ -0.51
Chd8-201ENSMUST00000089752 DaxxO35613 739 aa11.82□□□□□ -0.52
Chd8-201ENSMUST00000089752 Upf2A2AT37 1269 aaKnown RBP11.74□□□□□ -0.53
Chd8-201ENSMUST00000089752 Nop58Q6DFW4 536 aaKnown RBP11.73□□□□□ -0.53
Chd8-201ENSMUST00000089752 Slc24a1Q91WD8 1130 aa11.68□□□□□ -0.54
Chd8-201ENSMUST00000089752 Adam1bQ8R534 806 aa11.66□□□□□ -0.54
Chd8-201ENSMUST00000089752 Supt5hO55201 1082 aaKnown RBP11.64□□□□□ -0.55
Chd8-201ENSMUST00000089752 Rangap1P46061 589 aaKnown RBP11.64□□□□□ -0.55
Chd8-201ENSMUST00000089752 Pcgf6Q99NA9 353 aa11.61□□□□□ -0.55
Chd8-201ENSMUST00000089752 Eif5bQ05D44 1216 aaKnown RBP11.6□□□□□ -0.55
Chd8-201ENSMUST00000089752 Hsp90aa1P07901 733 aaKnown RBP11.59□□□□□ -0.55
Chd8-201ENSMUST00000089752 Tnnt2P50752 301 aa11.57□□□□□ -0.56
Chd8-201ENSMUST00000089752 Npm2Q80W85 207 aa11.56□□□□□ -0.56
Chd8-201ENSMUST00000089752 Trim44Q9QXA7 346 aa11.55□□□□□ -0.56
Chd8-201ENSMUST00000089752 Trim41Q5NCC3 630 aa11.52□□□□□ -0.56
Chd8-201ENSMUST00000089752 Esf1Q3V1V3 845 aaKnown RBP11.5□□□□□ -0.57
Chd8-201ENSMUST00000089752 Lmod3E9QA62 571 aa11.46□□□□□ -0.58
Chd8-201ENSMUST00000089752 Aplp2Q06335 707 aa11.46□□□□□ -0.58
Chd8-201ENSMUST00000089752 Znf326O88291 580 aa11.45□□□□□ -0.58
Chd8-201ENSMUST00000089752 SetQ9EQU5 289 aaKnown RBP11.41□□□□□ -0.58
Chd8-201ENSMUST00000089752 Map7d2A2AG50 781 aa11.41□□□□□ -0.58
Chd8-201ENSMUST00000089752 Calcoco2A2A6M5 331 aa11.39□□□□□ -0.59
Chd8-201ENSMUST00000089752 Q8BT18 775 aa11.39□□□□□ -0.59
Chd8-201ENSMUST00000089752 NclP09405 707 aaKnown RBP11.35□□□□□ -0.59
Chd8-201ENSMUST00000089752 Htatsf1Q8BGC0 757 aa11.3□□□□□ -0.6
Chd8-201ENSMUST00000089752 CalrP14211 416 aaKnown RBP11.28□□□□□ -0.6
Chd8-201ENSMUST00000089752 Hdac5Q9Z2V6 1113 aa11.27□□□□□ -0.6
Chd8-201ENSMUST00000089752 TonslQ6NZL6 1363 aa11.27□□□□□ -0.61
Chd8-201ENSMUST00000089752 UbtfP25976 765 aaKnown RBP11.27□□□□□ -0.61
Chd8-201ENSMUST00000089752 Anks4bQ8K3X6 423 aa11.25□□□□□ -0.61
Chd8-201ENSMUST00000089752 ClspnQ80YR7 1315 aa11.24□□□□□ -0.61
Chd8-201ENSMUST00000089752 Ccdc27Q3V036 639 aa11.24□□□□□ -0.61
Chd8-201ENSMUST00000089752 AU015836B2RUM3 263 aa11.23□□□□□ -0.61
Chd8-201ENSMUST00000089752 Mak16Q8BGS0 296 aaKnown RBP11.23□□□□□ -0.61
Chd8-201ENSMUST00000089752 Dusp9Q7TNL7 452 aa11.22□□□□□ -0.61
Chd8-201ENSMUST00000089752 Gab3Q8BSM5 595 aa11.2□□□□□ -0.62
Chd8-201ENSMUST00000089752 Irx3P81067 507 aa11.2□□□□□ -0.62
Chd8-201ENSMUST00000089752 Znf316Q6PGE4 1016 aa11.16□□□□□ -0.62
Chd8-201ENSMUST00000089752 BccipQ9CWI3 316 aa11.16□□□□□ -0.62
Chd8-201ENSMUST00000089752 PtmaP26350 111 aa11.14□□□□□ -0.63
Chd8-201ENSMUST00000089752 PtmsQ9D0J8 101 aaKnown RBP11.14□□□□□ -0.63
Chd8-201ENSMUST00000089752 4933402E13RikQ9D4D2 429 aa11.14□□□□□ -0.63
Chd8-201ENSMUST00000089752 Bcl11aQ9QYE3 773 aa11.14□□□□□ -0.63
Chd8-201ENSMUST00000089752 Os9Q8K2C7 672 aa11.13□□□□□ -0.63
Chd8-201ENSMUST00000089752 DekQ7TNV0 380 aaKnown RBP11.12□□□□□ -0.63
Chd8-201ENSMUST00000089752 Gm973E9Q295 1059 aa11.12□□□□□ -0.63
Chd8-201ENSMUST00000089752 Hmgb1P63158 215 aaKnown RBP11.12□□□□□ -0.63
Chd8-201ENSMUST00000089752 MsnP26041 577 aaKnown RBP11.11□□□□□ -0.63
Chd8-201ENSMUST00000089752 Ccdc136Q3TVA9 1136 aa11.1□□□□□ -0.63
Chd8-201ENSMUST00000089752 Calr4Q3TQS0 420 aa11.08□□□□□ -0.64
Chd8-201ENSMUST00000089752 Rrp12Q6P5B0 1295 aaKnown RBP11.04□□□□□ -0.64
Chd8-201ENSMUST00000089752 Pes1Q9EQ61 584 aaKnown RBP11.04□□□□□ -0.64
Chd8-201ENSMUST00000089752 Wdr43Q6ZQL4 677 aaKnown RBP11.03□□□□□ -0.64
Chd8-201ENSMUST00000089752 Nlrp6Q91WS2 869 aa11.01□□□□□ -0.65
Chd8-201ENSMUST00000089752 Hsp90b1P08113 802 aaKnown RBP11.01□□□□□ -0.65
Chd8-201ENSMUST00000089752 Podxl2Q8CAE9 603 aa11□□□□□ -0.65
Chd8-201ENSMUST00000089752 Ppm1gQ61074 542 aa10.99□□□□□ -0.65
Chd8-201ENSMUST00000089752 PnnO35691 725 aaKnown RBP10.99□□□□□ -0.65
Chd8-201ENSMUST00000089752 RdxP26043 583 aaKnown RBP10.96□□□□□ -0.66
Chd8-201ENSMUST00000089752 Ddrgk1Q80WW9 315 aa10.96□□□□□ -0.66
Chd8-201ENSMUST00000089752 Cald1E9QA15 768 aaKnown RBP10.95□□□□□ -0.66
Chd8-201ENSMUST00000089752 Ppp4r2Q0VGB7 417 aa10.95□□□□□ -0.66
Chd8-201ENSMUST00000089752 AppP12023 770 aa10.95□□□□□ -0.66
Chd8-201ENSMUST00000089752 Casc1Q6TDU8 730 aa10.94□□□□□ -0.66
Chd8-201ENSMUST00000089752 Pknox2Q8BG99 474 aa10.94□□□□□ -0.66
Chd8-201ENSMUST00000089752 Zbtb7cQ8VCZ7 619 aa10.93□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms