RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Grin2bQ01097 1482 aa20.02■□□□□ 0.8
Usp4-201ENSMUST00000035237 L3mbtl2P59178 703 aa20.02■□□□□ 0.8
Usp4-201ENSMUST00000035237 Gm7298A0A0N4SVU1 1476 aa20.01■□□□□ 0.79
Usp4-201ENSMUST00000035237 Apbb1Q9QXJ1 710 aa20■□□□□ 0.79
Usp4-201ENSMUST00000035237 Ercc6F8VPZ5 1481 aa20■□□□□ 0.79
Usp4-201ENSMUST00000035237 Plcd4Q8K3R3 807 aa19.99■□□□□ 0.79
Usp4-201ENSMUST00000035237 Cux1P53564 1515 aa19.98■□□□□ 0.79
Usp4-201ENSMUST00000035237 Cux2P70298 1426 aa19.98■□□□□ 0.79
Usp4-201ENSMUST00000035237 A2mQ6GQT1 1474 aa19.97■□□□□ 0.79
Usp4-201ENSMUST00000035237 Ncoa2Q61026 1462 aa19.96■□□□□ 0.79
Usp4-201ENSMUST00000035237 Prdm10Q3UTQ7 1184 aa19.96■□□□□ 0.79
Usp4-201ENSMUST00000035237 Camsap1A2AHC3 1581 aa19.95■□□□□ 0.78
Usp4-201ENSMUST00000035237 Trak1Q6PD31 939 aa19.95■□□□□ 0.78
Usp4-201ENSMUST00000035237 Mtus2Q3UHD3 1353 aa19.94■□□□□ 0.78
Usp4-201ENSMUST00000035237 Frmpd1A2AKB4 1549 aa19.94■□□□□ 0.78
Usp4-201ENSMUST00000035237 TnnQ80Z71 1560 aa19.94■□□□□ 0.78
Usp4-201ENSMUST00000035237 Fkbp15Q6P9Q6 1216 aaKnown RBP19.92■□□□□ 0.78
Usp4-201ENSMUST00000035237 Zscan21Q07231 555 aa19.91■□□□□ 0.78
Usp4-201ENSMUST00000035237 Os9Q8K2C7 672 aa19.91■□□□□ 0.78
Usp4-201ENSMUST00000035237 Ncoa1P70365 1447 aa19.91■□□□□ 0.78
Usp4-201ENSMUST00000035237 Iqcf3Q9D498 203 aa19.9■□□□□ 0.78
Usp4-201ENSMUST00000035237 Trim30dE9PWL0 497 aa19.89■□□□□ 0.77
Usp4-201ENSMUST00000035237 LrpprcQ6PB66 1392 aaKnown RBP19.88■□□□□ 0.77
Usp4-201ENSMUST00000035237 Dapk1Q80YE7 1442 aa19.88■□□□□ 0.77
Usp4-201ENSMUST00000035237 Mak16Q8BGS0 296 aaKnown RBP19.88■□□□□ 0.77
Usp4-201ENSMUST00000035237 Rpgrip1lQ8CG73 1264 aa19.87■□□□□ 0.77
Usp4-201ENSMUST00000035237 Lamc3Q9R0B6 1581 aa19.86■□□□□ 0.77
Usp4-201ENSMUST00000035237 Camsap2Q8C1B1 1461 aa19.85■□□□□ 0.77
Usp4-201ENSMUST00000035237 Chmp5Q9D7S9 219 aa19.83■□□□□ 0.76
Usp4-201ENSMUST00000035237 Sart3Q9JLI8 962 aaKnown RBP19.83■□□□□ 0.76
Usp4-201ENSMUST00000035237 Polr3glQ8R0C0 218 aa19.81■□□□□ 0.76
Usp4-201ENSMUST00000035237 Gm1043A0A140LJC2 1431 aa19.81■□□□□ 0.76
Usp4-201ENSMUST00000035237 4930567H17RikQ3V0K5 233 aa19.81■□□□□ 0.76
Usp4-201ENSMUST00000035237 Dnai1Q8C0M8 701 aa19.81■□□□□ 0.76
Usp4-201ENSMUST00000035237 Ttll13A4Q9F6 804 aa19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Nlrp6Q91WS2 869 aa19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Zfp444Q3TDV8 331 aaKnown RBP19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Neurod2Q62414 383 aa19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Rad54l2Q99NG0 1466 aa19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Erich6D3Z6S9 713 aa19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Hsp90ab1P11499 724 aaKnown RBP19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Erich3F6QRE9 1637 aa19.8■□□□□ 0.76
Usp4-201ENSMUST00000035237 Plekhh2Q8C115 1491 aa19.79■□□□□ 0.76
Usp4-201ENSMUST00000035237 Q7TT23 1179 aa19.79■□□□□ 0.76
Usp4-201ENSMUST00000035237 Ift140E9PY46 1464 aa19.78■□□□□ 0.76
Usp4-201ENSMUST00000035237 CrbnQ8C7D2 445 aa19.78■□□□□ 0.76
Usp4-201ENSMUST00000035237 Dhx9O70133 1380 aaKnown RBP19.76■□□□□ 0.75
Usp4-201ENSMUST00000035237 Spryd3E9Q9B3 442 aa19.76■□□□□ 0.75
Usp4-201ENSMUST00000035237 Duox2A2AQ99 1517 aa19.75■□□□□ 0.75
Usp4-201ENSMUST00000035237 Crocc2F6XLV1 1638 aa19.75■□□□□ 0.75
Usp4-201ENSMUST00000035237 Prkrip1Q9CWV6 186 aaKnown RBP19.75■□□□□ 0.75
Usp4-201ENSMUST00000035237 Ppm1gQ61074 542 aa19.75■□□□□ 0.75
Usp4-201ENSMUST00000035237 Plekhg5Q66T02 1073 aa19.74■□□□□ 0.75
Usp4-201ENSMUST00000035237 EspnQ9ET47 871 aa19.73■□□□□ 0.75
Usp4-201ENSMUST00000035237 Urb2E9Q7L1 1524 aaKnown RBP19.73■□□□□ 0.75
Usp4-201ENSMUST00000035237 Map4P27546 1125 aaKnown RBP19.73■□□□□ 0.75
Usp4-201ENSMUST00000035237 Wdr62Q3U3T8 1523 aa19.73■□□□□ 0.75
Usp4-201ENSMUST00000035237 Rwdd1Q9CQK7 243 aa19.72■□□□□ 0.75
Usp4-201ENSMUST00000035237 Esx1O88933 382 aa19.71■□□□□ 0.75
Usp4-201ENSMUST00000035237 Armcx1Q9CX83 456 aa19.69■□□□□ 0.74
Usp4-201ENSMUST00000035237 Rprd2Q6NXI6 1469 aaKnown RBP19.68■□□□□ 0.74
Usp4-201ENSMUST00000035237 Lmo7E9PYF4 1699 aaKnown RBP19.67■□□□□ 0.74
Usp4-201ENSMUST00000035237 Rangap1P46061 589 aaKnown RBP19.66■□□□□ 0.74
Usp4-201ENSMUST00000035237 Pank3Q8R2W9 370 aa19.66■□□□□ 0.74
Usp4-201ENSMUST00000035237 Inpp5dQ9ES52 1191 aa19.66■□□□□ 0.74
Usp4-201ENSMUST00000035237 Kdm2aP59997 1161 aa19.65■□□□□ 0.74
Usp4-201ENSMUST00000035237 NudcO35685 332 aaKnown RBP19.65■□□□□ 0.74
Usp4-201ENSMUST00000035237 PogzQ8BZH4 1409 aaKnown RBP19.65■□□□□ 0.74
Usp4-201ENSMUST00000035237 Trim26Q99PN3 545 aa19.64■□□□□ 0.73
Usp4-201ENSMUST00000035237 Mug1P28665 1476 aa19.64■□□□□ 0.73
Usp4-201ENSMUST00000035237 Speer4f1Q9D5Q6 258 aa19.63■□□□□ 0.73
Usp4-201ENSMUST00000035237 Mbd3Q9Z2D8 285 aaKnown RBP19.63■□□□□ 0.73
Usp4-201ENSMUST00000035237 Phldb1Q6PDH0 1371 aaKnown RBP19.63■□□□□ 0.73
Usp4-201ENSMUST00000035237 Ttll5Q8CHB8 1328 aa19.63■□□□□ 0.73
Usp4-201ENSMUST00000035237 Ifit1bl1D3Z6F0 470 aa19.63■□□□□ 0.73
Usp4-201ENSMUST00000035237 Nup155Q99P88 1391 aaKnown RBP19.63■□□□□ 0.73
Usp4-201ENSMUST00000035237 Eif2s2Q99L45 331 aaKnown RBP19.63■□□□□ 0.73
Usp4-201ENSMUST00000035237 Erbb3Q61526 1339 aa19.62■□□□□ 0.73
Usp4-201ENSMUST00000035237 NexmifQ5DTT1 1515 aa19.62■□□□□ 0.73
Usp4-201ENSMUST00000035237 Rrp7aQ9D1C9 280 aaKnown RBP19.62■□□□□ 0.73
Usp4-201ENSMUST00000035237 Polr1aO35134 1717 aaKnown RBP19.6■□□□□ 0.73
Usp4-201ENSMUST00000035237 Abcc5Q9R1X5 1436 aa19.6■□□□□ 0.73
Usp4-201ENSMUST00000035237 EprsQ8CGC7 1512 aaKnown RBP19.6■□□□□ 0.73
Usp4-201ENSMUST00000035237 WrnO09053 1401 aa19.58■□□□□ 0.73
Usp4-201ENSMUST00000035237 Mre11Q61216 706 aa19.58■□□□□ 0.72
Usp4-201ENSMUST00000035237 Kank1E9Q238 1360 aa19.58■□□□□ 0.72
Usp4-201ENSMUST00000035237 Mroh3A0A1D5RM54 893 aa19.57■□□□□ 0.72
Usp4-201ENSMUST00000035237 Gm6268A2A3U9 297 aa19.57■□□□□ 0.72
Usp4-201ENSMUST00000035237 Dennd4bQ3U1Y4 1499 aa19.57■□□□□ 0.72
Usp4-201ENSMUST00000035237 Arid4bA2CG63 1314 aaKnown RBP19.57■□□□□ 0.72
Usp4-201ENSMUST00000035237 Rock2P70336 1388 aa19.57■□□□□ 0.72
Usp4-201ENSMUST00000035237 Clstn2Q9ER65 966 aa19.56■□□□□ 0.72
Usp4-201ENSMUST00000035237 Pprc1Q6NZN1 1644 aa19.56■□□□□ 0.72
Usp4-201ENSMUST00000035237 CadpsQ80TJ1 1355 aa19.56■□□□□ 0.72
Usp4-201ENSMUST00000035237 Ipo8Q7TMY7 1010 aa19.55■□□□□ 0.72
Usp4-201ENSMUST00000035237 Pknox2Q8BG99 474 aa19.55■□□□□ 0.72
Usp4-201ENSMUST00000035237 Rock1P70335 1354 aa19.54■□□□□ 0.72
Usp4-201ENSMUST00000035237 Fgd1P52734 960 aa19.54■□□□□ 0.72
Usp4-201ENSMUST00000035237 Thoc2B1AZI6 1594 aaKnown RBP19.54■□□□□ 0.72
Usp4-201ENSMUST00000035237 Slc4a1apE9PX68 744 aa19.54■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms