RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Iffo2Q8R2V2 512 aa18.07■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Noc3lQ8VI84 807 aaKnown RBP18.07■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Golga3P55937 1487 aa18.06■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Glipr1l2Q9CQ35 332 aa18.05■□□□□ 0.48
Col7a1-201ENSMUST00000026740 EspnQ9ET47 871 aa18.05■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Tpm4Q6IRU2 248 aa18.05■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Rtn4Q99P72 1162 aaKnown RBP18.05■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Ddrgk1Q80WW9 315 aa18.04■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Ccdc47Q9D024 483 aaKnown RBP18.04■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Spag9Q58A65 1321 aaKnown RBP18.04■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Tmf1B9EKI3 1091 aa18.03■□□□□ 0.48
Col7a1-201ENSMUST00000026740 HdgfP51859 237 aaKnown RBP18.03■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Zrsr2Q62377 462 aaKnown RBP18.03■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Apbb1Q9QXJ1 710 aa18.02■□□□□ 0.48
Col7a1-201ENSMUST00000026740 Neurod2Q62414 383 aa18.01■□□□□ 0.47
Col7a1-201ENSMUST00000026740 Dusp9Q7TNL7 452 aa18.01■□□□□ 0.47
Col7a1-201ENSMUST00000026740 Becn1O88597 448 aa18■□□□□ 0.47
Col7a1-201ENSMUST00000026740 Tpm1P58771 284 aa17.99■□□□□ 0.47
Col7a1-201ENSMUST00000026740 Grwd1Q810D6 446 aaKnown RBP17.99■□□□□ 0.47
Col7a1-201ENSMUST00000026740 Chmp5Q9D7S9 219 aa17.98■□□□□ 0.47
Col7a1-201ENSMUST00000026740 Kif15Q6P9L6 1387 aa17.98■□□□□ 0.47
Col7a1-201ENSMUST00000026740 Tpm2P58774 284 aa17.98■□□□□ 0.47
Col7a1-201ENSMUST00000026740 1700019A02RikA0A087WPV9 146 aa17.97■□□□□ 0.47
Col7a1-201ENSMUST00000026740 MecomP14404 1042 aa17.97■□□□□ 0.47
Col7a1-201ENSMUST00000026740 A0A1L1SQF0 893 aa17.95■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Trim30aP15533 496 aa17.94■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Tpd52l1O54818 204 aa17.94■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Kiaa0754Q69ZZ9 979 aa17.93■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Ccdc34Q3UI66 367 aa17.91■□□□□ 0.46
Col7a1-201ENSMUST00000026740 VgfQ0VGU4 617 aa17.91■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Ipo9Q91YE6 1041 aa17.9■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Ush1cQ9ES64 910 aa17.9■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Rsph4aQ8BYM7 716 aa17.89■□□□□ 0.46
Col7a1-201ENSMUST00000026740 Ipo8Q7TMY7 1010 aa17.89■□□□□ 0.45
Col7a1-201ENSMUST00000026740 NgefQ8CHT1 710 aa17.89■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Rrp7aQ9D1C9 280 aaKnown RBP17.88■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Rsph3aQ3UFY4 516 aa17.88■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Rock2P70336 1388 aa17.88■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Cgnl1Q6AW69 1298 aa17.88■□□□□ 0.45
Col7a1-201ENSMUST00000026740 CgnP59242 1191 aa17.87■□□□□ 0.45
Col7a1-201ENSMUST00000026740 1700123L14RikQ3V2K7 440 aa17.87■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Ddx11Q6AXC6 880 aa17.87■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Ipo7Q9EPL8 1038 aaKnown RBP17.87■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Ccer1Q9CQL2 403 aa17.87■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Spryd3E9Q9B3 442 aa17.86■□□□□ 0.45
Col7a1-201ENSMUST00000026740 B4galnt3Q6L8S8 986 aa17.86■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Hap1O35668 628 aa17.85■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Fyco1Q8VDC1 1437 aa17.85■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Armcx1Q9CX83 456 aa17.85■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Stard8Q8K031 1019 aa17.85■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Evc2Q8K1G2 1220 aa17.84■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Chaf1aQ9QWF0 911 aa17.84■□□□□ 0.45
Col7a1-201ENSMUST00000026740 St18Q80TY4 1045 aa17.83■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Dbr1Q923B1 550 aa17.83■□□□□ 0.45
Col7a1-201ENSMUST00000026740 Hook1Q8BIL5 728 aa17.83■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Bcl11aQ9QYE3 773 aa17.83■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Arhgap35Q91YM2 1499 aa17.82■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Srek1Q8BZX4 494 aaKnown RBP17.82■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Zscan21Q07231 555 aa17.81■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Q3TQI7 289 aaKnown RBP17.81■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Ylpm1Q9R0I7 1386 aaKnown RBP17.81■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Arhgap27A2AB59 869 aa17.81■□□□□ 0.44
Col7a1-201ENSMUST00000026740 MyclP10166 368 aa17.81■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Stk24Q99KH8 431 aa17.81■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Odf2A3KGV1 830 aaKnown RBP17.81■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Isy1Q69ZQ2 285 aaKnown RBP17.8■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Taf3Q5HZG4 932 aa17.8■□□□□ 0.44
Col7a1-201ENSMUST00000026740 AampJ3QN89 436 aa17.79■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Rab11fip3Q8CHD8 1047 aa17.79■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Gm21969J3QJZ1 289 aa17.78■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Golga2Q921M4 999 aa17.78■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Kri1Q8VDQ9 704 aaKnown RBP17.78■□□□□ 0.44
Col7a1-201ENSMUST00000026740 Filip1lQ6P6L0 1131 aa17.77■□□□□ 0.44
Col7a1-201ENSMUST00000026740 U2surpQ6NV83 1029 aaKnown RBP17.76■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Gtf2e1Q9D0D5 440 aa17.76■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Ccar1Q8CH18 1146 aaKnown RBP17.76■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Vps53Q8CCB4 832 aa17.75■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Slc4a1apE9PX68 744 aa17.75■□□□□ 0.43
Col7a1-201ENSMUST00000026740 CalrP14211 416 aaKnown RBP17.74■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Kif3aP28741 701 aa17.74■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Cplx2P84086 134 aa17.73■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Sf3a1Q8K4Z5 791 aaKnown RBP17.73■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Polr1aO35134 1717 aaKnown RBP17.73■□□□□ 0.43
Col7a1-201ENSMUST00000026740 BccipQ9CWI3 316 aa17.72■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Dctn1O08788 1281 aa17.72■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Speer4f1Q9D5Q6 258 aa17.72■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Kif3cO35066 796 aa17.72■□□□□ 0.43
Col7a1-201ENSMUST00000026740 CntlnA2AM05 1397 aa17.72■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Kif7B7ZNG0 1348 aa17.72■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Chmp4cQ9D7F7 232 aa17.71■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Dhx57Q6P5D3 1388 aaKnown RBP17.71■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Supt16hQ920B9 1047 aa17.71■□□□□ 0.43
Col7a1-201ENSMUST00000026740 Plekhh2Q8C115 1491 aa17.71■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Nap1l3Q794H2 544 aa17.71■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Rufy1Q8BIJ7 712 aa17.7■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Gcom1E9PZ54 550 aa17.7■□□□□ 0.42
Col7a1-201ENSMUST00000026740 MyzapQ3UIJ9 466 aa17.7■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Tmco5bQ80X59 307 aa17.7■□□□□ 0.42
Col7a1-201ENSMUST00000026740 U2af1Q9D883 239 aaKnown RBP17.7■□□□□ 0.42
Col7a1-201ENSMUST00000026740 Brpf1B2RRD7 1212 aa17.69■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms