RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Arap1Q4LDD4 1452 aa5.9□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Crocc2F6XLV1 1638 aa5.9□□□□□ -1.46
Prkdc-201ENSMUST00000023352 Cc2d2bA0A286YDU8 1405 aa5.9□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Fam135aQ6NS59 1506 aa5.9□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Ipo9Q91YE6 1041 aa5.9□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Zmym4A2A791 1549 aaKnown RBP5.89□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Mrc2Q64449 1479 aa5.89□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Map7d2A2AG50 781 aa5.89□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Rrp9Q91WM3 475 aaKnown RBP5.88□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Znf326O88291 580 aa5.87□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Pde3bQ61409 1100 aa5.87□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Ddrgk1Q80WW9 315 aa5.87□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Il16O54824 1322 aa5.87□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Mapk8ip3Q9ESN9 1337 aa5.87□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Eid3Q3V124 375 aa5.87□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Hnrnpul2Q00PI9 745 aaKnown RBP5.86□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Dnttip2Q8R2M2 758 aaKnown RBP5.86□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Pcf11G3X9Z4 1553 aa5.86□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Rrp12Q6P5B0 1295 aaKnown RBP5.86□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Eif4g2Q62448 906 aaKnown RBP5.86□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Urb2E9Q7L1 1524 aaKnown RBP5.86□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Smg6P61406 1418 aaKnown RBP5.85□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Nsd2Q8BVE8 1365 aa5.85□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Dnai2A2AC93 623 aa5.85□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Hoxa7P02830 229 aa5.85□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Caskin1Q6P9K8 1431 aa5.85□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Fam163aQ8CAA5 168 aa5.84□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Mrs2Q5NCE8 434 aa5.84□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Ankrd26Q811D2 1581 aa5.84□□□□□ -1.47
Prkdc-201ENSMUST00000023352 Ciz1Q8VEH2 845 aa5.84□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Soga1E1U8D0 1418 aa5.84□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Arhgef12Q8R4H2 1543 aaKnown RBP5.83□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Atp1b4Q99ME6 356 aa5.83□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Calcoco2A2A6M5 331 aa5.83□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Dnai1Q8C0M8 701 aa5.83□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Gm38655A0A286YDK6 273 aa5.83□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Card11Q8CIS0 1159 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Hsp90ab1P11499 724 aaKnown RBP5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Mlh3A0A1Y7VMP7 1443 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 MsnP26041 577 aaKnown RBP5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Mre11Q61216 706 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Ccdc141E9Q8Q6 1531 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Naip2Q9QUK4 1447 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Prdm16A2A935 1275 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Map7O88735 730 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Gm7298A0A0N4SVU1 1476 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Mapk8ip2Q9ERE9 830 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Gm973E9Q295 1059 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Wdr7Q920I9 1489 aa5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 PnnO35691 725 aaKnown RBP5.82□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Grin2aP35436 1464 aa5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Usp47Q8BY87 1376 aa5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Fhod3Q76LL6 1578 aa5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Gtf2a1Q99PM3 378 aa5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Gcc2Q8CHG3 1679 aa5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Isy1Q69ZQ2 285 aaKnown RBP5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Ipo4Q8VI75 1082 aa5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Ppip5k1A2ARP1 1436 aa5.81□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Aebp2Q9Z248 504 aaKnown RBP5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Mphosph9A6H5Y1 991 aa5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Rprd2Q6NXI6 1469 aaKnown RBP5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Pkd2O35245 966 aa5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Iqcf3Q9D498 203 aa5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 PtprkP35822 1457 aa5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Tmf1B9EKI3 1091 aa5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Polr3glQ8R0C0 218 aa5.8□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Cfap74Q3UY96 1578 aa5.79□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Fgd1P52734 960 aa5.79□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Ofd1Q80Z25 1017 aa5.79□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Lmtk2Q3TYD6 1471 aa5.79□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Thoc2B1AZI6 1594 aaKnown RBP5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Zscan21Q07231 555 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 VgfQ0VGU4 617 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 CadpsQ80TJ1 1355 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Asxl1P59598 1514 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Glipr1l2Q9CQ35 332 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Lmo7E9PYF4 1699 aaKnown RBP5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Arhgap31A6X8Z5 1425 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Plekhg5Q66T02 1073 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Mug1P28665 1476 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Gm1043A0A140LJC2 1431 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Ush1cQ9ES64 910 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 NexmifQ5DTT1 1515 aa5.78□□□□□ -1.48
Prkdc-201ENSMUST00000023352 Trim30dE9PWL0 497 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Chic2Q9D9G3 165 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Myom3A2ABU4 1439 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Tpm2P58774 284 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Kif20aP97329 887 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Nup155Q99P88 1391 aaKnown RBP5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Slx4Q6P1D7 1565 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Mroh3A0A1D5RM54 893 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Erich6D3Z6S9 713 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 EspnQ9ET47 871 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Rock1P70335 1354 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Abca5Q8K448 1642 aa5.77□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Phf14Q9D4H9 881 aa5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Magi1Q6RHR9 1471 aa5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Rrbp1Q99PL5 1605 aaKnown RBP5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 Becn1O88597 448 aa5.76□□□□□ -1.49
Prkdc-201ENSMUST00000023352 DekQ7TNV0 380 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms